Marmota marmota marmota (Alpine marmot): 107156606
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Entry
107156606 CDS
T09644
Symbol
Nup210l
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03013
Nucleocytoplasmic transport
mmma05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107156606 (Nup210l)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
107156606 (Nup210l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mmma03019
]
107156606 (Nup210l)
Messenger RNA biogenesis [BR:
mmma03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107156606 (Nup210l)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_13th
Ig_NUP210_15th
Ig_NUP210_2nd
Ig_NUP210_5th
Ig_NUP210_14th
Ig_NUP210_8th
Ig_NUP210_9th
Ig_NUP210_1st
Ig_NUP210_4th
Ig_NUP210_16th
NUP210_Ig
Big_2
Ig_NUP210_7th
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-GeneID:
107156606
NCBI-ProteinID:
XP_015358143
LinkDB
All DBs
Position
Unknown
AA seq
1692 aa
AA seq
DB search
MINLGATVLLCCVPLCRLLCLSLALFGTLANKLNVPQVLLPFGREPGRVPFLLEAQRGCY
IWHSTHHDAVTVEPLYENGTLCSQRAVLIAESTQPIRLSSIILAREIVTDHELRCDVKVD
VIDSIEIVSRTRELYVDDSPLELMVRALDAEGNTFSSLAGMMFEWSIAQDNDPAREERSS
KIRILKFSEAEYSPPHYIAEMENEEKQGDVILVSGIRTGAAIVKVRIYEQFYKKVAAALI
RLLVLENIFLIPSHDIYLLVGAYIKYQVAKMVQGRMTEVKFPLEHYILELQDHRFTRNGS
LSGKVALLDERTATVTALRLGQTNLVFVHKNVHMRSVSGLPNCTIYVVEPGFLGFTVYPG
DRWSLEVGQVYVITIEVFDRSSTKVYISDNLRITYGFLEEYFKEQLTTVNGSYHVVKALK
DGVVVINASLTSIVHQNNNIHPVKCIIKHQQEVKIYFPIKLTPNFLAFPHHPLGMLYRYK
VQVEGGSGNFTWTSSNETVAMVTTKGVVTAGQVRGNSTVLARDVQNPFRYGEIKVLTFRI
GNHPGVLNPSPAVEVVQVRFICAHPASMSVTPVYKVPAGAQPCPLPQHNKQLIPVSSLRD
TVLELAVFDQHRRKFDNFSSLMLEWKSSNETLAHFEDYKSMEMVAKDDGSGQTRLHGHQI
LKVHQIKGTVLIGVNFVGYSEKKSPKDISNLPRSAAVELLLVDDVTVLPENATIYNHPRV
KEIFSLVEGSGYFLVNSSELDIVTITYMEAESSVQLVPVHPGFLTLEVYDLCLAFLGPAT
AHLQVSDIQELELDLIDKVEIGKTVLVTVRVLDSSKRPFLNKYFRNMELKLQLASPIVTL
TLMEEQDEYSENYIVRAVTIGQTTLVAIARDKMGRKFTSAPRQIEVFPPFRLVPEKMTLI
PTNMMQVMSEGGPQPQSIIHFFISNQTVAVVNRRGQVTGKVVGTAVVHGTIQTVNEDTGK
VIVFSQDEVQIDVVQLRAVRILAAATRLITATEMPVYVMGVTSTQTPFSFSNANPGLTFQ
WSMSKRDVLDLVPRHSEVFLQLPVENNFAMVVHTKAAGRTSIKVTVRCVNSSSGQFEGNL
SELSDEVQILVFEKLQLFSSECQPEQILMPMNSQLKLHTNREGAAFVSSRVLKCFPNSSV
IEEDGEGLLKAGSIAGTAVLEVTSIEPFGVNQTTITGVQVAPVTYLKISSQPKLYTTQGR
TLSAFPLGMSLTFIVQFYNSIGEKFHTHNTQLYVALNRDDLLLIGPGNRNYTYMAQAVNK
GVTLVGLWDRRHPGMADYIPVAVEHAIEPDTKLTFVGDVICFSTHLVNQHGEPGIWMISA
DSILQTDIVTGVGVARSPGTATIFHDIPGVVKTYREVVVNASSRLTLSYDLKTHLTNTPN
STVFKLFITTGRNGINLKGSCTPNQALAITKVLLPETLMLCHVQFNNTLLDIPASKVFHV
HSDFSMEKGVYVCLIQVRPQSEELLQALSTADTSVYGWATLVSERSKNGMQRILIPFLPA
FYINQSELVLRHKGDVGEIKVLGVDRVLENLEVFPSSPVLVISDHRQSLLTPGLAVYPVR
IVNFTAFQQMASPVFINISCVLTSQSEAVVVRAMKEKFGADQCEGSGVFKQFIGSYQILL
FTLFAVLASTAFIFLAYSAFLNKIQTVPVVYVPTIGTPQPGSYTSASSPPFLSPQPPLTQ
SRLQHWLWSIRH
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgataaacctcggagccacggtgctcctttgctgcgtgcctctctgtcgcctcctgtgc
ctgtcactggccttgtttgggaccctcgccaacaaacttaacgtgccgcaggtgttgctg
ccctttggccgggagccaggccgggtgcctttcctgctggaggcacagcggggctgctac
atctggcattccacccatcatgacgcagtaactgttgagcctttatatgaaaatggcacc
ttatgttcccaaagagctgtacttattgctgaatctacccaacccatacgcctcagcagt
attattcttgctcgagaaatagtgactgatcatgaactacgctgtgatgttaaggttgat
gtgatagacagcattgaaattgtatctcggacccgggaactctatgtagatgattcacct
ctggaactgatggtgagggcattggatgctgaaggaaatacttttagtagtttggcaggg
atgatgtttgagtggagcattgcccaggataacgacccagcaagagaggaacggtctagc
aaaattaggattctgaaattctctgaagcagaatattctcctccacactatatagctgag
atggaaaatgaagagaaacaaggagatgtgattttggtgtctggaattaggactggtgct
gctattgtaaaagttagaatttatgaacaattctataagaaagtggcagcagcactgata
cgtctgcttgttttggaaaatatatttcttataccatcccatgatatttatctcttagta
ggagcatatattaaataccaagttgcaaaaatggttcagggaagaatgacagaggtgaaa
tttcccctggaacattatatactggaattgcaagaccatagatttacacgtaatgggtct
ctttctgggaaagtggctttactggatgagagaacagccacggtgactgccctccgacta
ggccaaactaatcttgtctttgttcacaaaaatgtccatatgcgatctgtgtctggactc
ccaaattgcactatatatgttgtagagcctggatttttaggattcaccgtctaccctgga
gaccgatggagtctagaggtgggacaggtgtatgttattacaatagaagtgtttgataga
agcagcacaaaggtctatatttcagataatctcaggattacatatggttttctagaggag
tactttaaagaacaactaaccactgtgaatggatcttaccatgtagtaaaagccttgaag
gatggtgtggtggtgataaatgcatccctgacttccatcgttcatcagaataacaatatt
catcctgtaaaatgtataataaaacaccagcaagaagtgaagatttattttcccatcaag
cttacacctaactttttggcatttcctcatcatcctctgggcatgttgtatcgttataaa
gtacaggtagagggtggtagtggcaacttcacctggacctcttctaatgaaacagtggcc
atggtaaccaccaaaggggtggtgactgcaggtcaggtcagagggaacagtactgttttg
gcccgagatgtacaaaatccctttcggtatggggaaattaaggttctcacatttcgaatt
ggaaatcacccaggagtcctgaaccctagtccagctgtggaggttgtacaagtgcgcttc
atatgtgcccatcctgccagtatgtccgtaacaccagtatataaggtgccagctggtgcc
cagccctgtcctctgcctcagcacaacaaacaactgattcctgtatcaagcctgagggac
acagttctggaactggcagtgtttgatcaacacaggagaaagtttgataatttcagttca
ctaatgctagaatggaaatcttccaatgagacactagcccattttgaagattataagtca
atggagatggtagccaaagatgatggcagtgggcagacccggttacatggtcatcagatc
cttaaagtacatcagatcaaagggactgtactcattggagtcaattttgtgggctattca
gagaagaaaagtccaaaggatatttccaacttgccaagatctgcagctgtggagctgctc
ctggtcgatgatgtaactgtgttgccagagaatgccaccatctataaccaccctcgagtg
aaggaaatatttagccttgtggagggatctggttattttttagtcaacagcagtgaactg
gatattgtcaccatcacttatatggaagcagaaagttctgtccagttagttccagtacat
cctggatttctcaccttggaggtctatgatctgtgcttggctttcttgggtccagcaaca
gcccatctccaggtgtcagacatacaagagctggaacttgatctgatagataaggttgag
ataggcaaaactgtattggtgactgtgagggttcttgactcttccaaacgcccattccta
aacaaatacttcagaaacatggagctcaaattgcagttggcatctcccattgtcaccctg
acactaatggaggaacaggatgaatactctgaaaattatatagttcgggctgtcactatt
gggcaaaccacactcgtggctattgccagagacaagatggggagaaaattcacatcggct
cctcgacaaattgaagtatttcctccattcagacttgttccagagaaaatgacactgatt
ccaactaacatgatgcaggtaatgtctgaaggtggccctcagccccaatctatcattcac
ttcttcatcagtaatcagactgtggctgttgtcaataggagggggcaagttacagggaaa
gtggttggcacagctgtggtccatggcaccatccagacagtaaatgaagatactggcaaa
gtcattgtgttttcccaggatgaagtacagattgatgttgttcagctgagggctgttagg
atccttgcagctgcaactagactcatcacagctactgagatgccagtttatgttatgggt
gtgaccagtacccagacccctttctccttcagcaatgccaaccctgggctcacattccag
tggtccatgagcaaaagagatgtattggatctagtacccaggcattcagaggttttccta
cagcttccagtagagaataactttgccatggtggtccacacgaaagcagctggcaggacc
agtatcaaagtcactgttcgatgtgtaaacagttcctctgggcagtttgagggaaatttg
tcagaactgtctgatgaagttcagattctggtgtttgaaaaactccaacttttctcttca
gagtgccaacctgagcagattttaatgcctatgaattctcagctcaaactccataccaac
agggaaggagccgcctttgtgagttcccgtgttctcaagtgtttccctaattcatctgtc
attgaggaagatggtgaagggctcctgaaagctggttccattgcaggtactgctgtgttg
gaagtcacttctattgaaccttttggagtcaaccaaacaaccataactggggtccaggta
gcaccggtaacatacctgaaaataagcagccaacccaagctatacacaacacaaggaagg
accctatcagcctttcccttgggcatgtctctcaccttcattgttcagttttataatagc
attggagagaaattccacacccacaatactcagctttatgtggctctgaacagagatgac
ttgctacttattggaccagggaacaggaactatacttacatggcccaggctgtaaataaa
ggggtgacccttgtgggactctgggaccggagacacccaggcatggcagactatattcct
gttgctgtggagcatgccattgagccagacaccaagcttacctttgttggggatgtcatc
tgcttcagcactcacctcgtcaaccagcatggtgaacctgggatatggatgatttctgct
gacagtattctacagacagacattgtcactggagtaggagtagccaggagtccaggaact
gcaacgatttttcatgacattccaggagtagtgaaaacatatcgagaggtggtcgtcaac
gcatcatcaagattaactctcagttatgacctcaagactcatctcactaacacccctaat
tcaactgtattcaaacttttcatcaccactggcagaaatggtatcaatctcaaagggtcc
tgtactccaaatcaggccttggccattacaaaagtacttcttccagagactctcatgctg
tgccatgtacaattcaataatactttactagacattccagcaagtaaagtctttcatgtc
cattcagacttcagcatggagaaaggggtttatgtctgcctaatccaggttagaccacag
tcagaagaattgcttcaggccctcagcacggctgacacctcagtctacgggtgggccaca
ctggtcagtgaacgtagcaagaatggaatgcaaagaatcctcattcctttccttccagcc
ttttacatcaaccagtcagaattggttctcagacacaaaggagacgttggggagattaaa
gtgctgggagttgacagagttcttgagaacctagaggtcttccccagctccccagttcta
gtgatctctgatcataggcagtctctgctcacccctggcctggctgtctatcctgtaaga
atagtcaactttactgccttccagcagatggcatcacctgttttcattaatatttcctgt
gtgctcaccagtcaaagtgaggccgtggtagtgagagctatgaaggagaagtttggtgca
gatcagtgtgaaggttcaggagtcttcaagcagttcattggttcttaccagatcctcctc
tttaccctctttgcggtgttggcatcaacagctttcatctttctagcttacagtgccttc
ctaaacaagattcagaccgttcctgtggtttatgtaccaactataggaacaccacagcca
ggttcttatacctccgcaagttctcctcctttcttgagcccacaacccccactgacccag
agtcgactacagcattggttatggagcataaggcactaa
DBGET
integrated database retrieval system
