Marmota marmota marmota (Alpine marmot): 107156826
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Entry
107156826 CDS
T09644
Symbol
Setdb1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma00310
Lysine degradation
mmma01100
Metabolic pathways
mmma04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
107156826 (Setdb1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
107156826 (Setdb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmma03036
]
107156826 (Setdb1)
Enzymes [BR:
mmma01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
107156826 (Setdb1)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
107156826 (Setdb1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
107156826 (Setdb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
MBD
SET
Pre-SET
Chromo_MORC2_6th
DUF4537
Chromo
Motif
Other DBs
NCBI-GeneID:
107156826
NCBI-ProteinID:
XP_015358456
Ensembl:
ENSMMMG00000019144
LinkDB
All DBs
Position
Unknown
AA seq
1308 aa
AA seq
DB search
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMECVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDETSQPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFLIFFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTTQFKPMEPPQPTAPPAPAAPAAPPAPPLSPQAGDNESLES
QLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSESAPGGKPGINQTYRSPLGSTTSAPA
PPAPPALPGPSAPPGPPAPPGPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCL
SRIRPIRNEQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIER
YLFETGCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPP
QVAYSKERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQVNPNS
GYQYKRLEECLPTGVYECNKRCKCDPHMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDI
AKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDVPCSSDSSGV
DLKDQEDGNSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETA
SKDSRPPDLGPPHLPIPSSVPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFGDSDSRSS
FKTSEGGEGRAGGSRGEAEKASTSGMAIKDEGDIKQAKKEDPDDRNKMSLVTETSRNYGY
NPSPVKPEGLRRPPSKTSMHQSRRLMASAQSNPDDILTLSSSTESEGESGTSRKPTPGQT
SATAVDSDDIQTISSGSEGDDFEDKKNMSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMA
SVDKGESAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLR
FPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccctccctgggtgtattggtctggatgcagcaacagctgcagtggaatctgaa
gagattgcagaactacaacaggcggtggttgaggagcttggtatctctatggaggaactt
cgacagttcattgatgaagaattggaaaagatggaatgtgtacaacagcgcaagaagcag
ctagcagagttggagacgtgggtaatacagaaagaatccgaagtggctcatgttgaccaa
ctctttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttctac
tccaagctgggactacagtacagggacagtagctctgaggatgaaacttcccagcctaca
gagataattgagattcctgatgaagatgatgatgttctcagcattgattcaggtgatgcg
ggcagcagaactccaaaagaccagaagctccgtgaggctatggccgccttaagaaaatca
gcccaagatgtccagaagttcatggatgctgtcaataagaagagcagttcccaggattta
cataaaggaaccttgagtcagatgtctggagaactgagcaaagatggtgacctggtagtt
agcatgcggattcttggcaagaagagaactaagacgtggcacaaaggcacccttatcgcc
atacagacagttgggccagggaagaaatacaaggtgaaatttgacaacaaaggaaagagt
ctgctttcagggaaccatattgcttatgattaccaccctcctgctgacaaattatatgtg
ggtagtcgagtggtggccaaatacaaagatgggaatcaggtctggctctatgctggcatt
gtggctgagacaccaaatgtcaaaaacaagctcaggtttcttattttctttgatgatggc
tatgcttcctatgtcacacagtcagaactctatcccatttgccggccattgaaaaagact
tgggaggacattgaagacatctcctgccgagacttcatagaggagtatatcactgcttac
cccaaccgacccatggtgctgcttaagagcggccagcttatcaagactgagtgggaaggc
acatggtggaagtcccgagttgaggaggtggatggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgagtggatctatcgaggttctacacggctggagcctatgttcagc
atgaagacgtcttcagcttctgcactggagaagaagcaagggggacagctcagaacacgt
ccaaatatgggtgctgtgaggagcaaaggccctgttgtccagtacacacaggatctgaca
actcagttcaaaccaatggagcccccacagcctacagctccacctgcccccgctgccccc
gctgccccacctgctcctcctctgtccccccaagcaggtgacaatgaaagcttggaaagc
cagcttgctcagtcacggaagcaggtagccaaaaagagcacatccttccgaccaggatct
gtgggctctggtcattcctcccctacgtctcctgcactcagtgaaagtgcccctggtggg
aaacctgggatcaatcagacttatagatcaccattaggctcaacaacctctgccccagca
ccccctgctcctccggcgcttccaggtccttcagcccctcctggtcctccagcccctcct
ggtcctccagcccctccagccttccatggcatgctggagcgggccccagcagagccctcc
taccgtgcccccatggagaagctcttctacttacctcatgtctgcagctatacttgcctg
tctcggatcagacctataaggaatgaacagtatcgggggaagaaccctctgttagtccca
ctgctgtatgacttccggcggatgacagccaggcgtcgagttaatcggaagatgggtttt
catgttatttataagacaccttgtggcctctgccttcggacaatgcaggagattgaacgt
tacctttttgagactggatgtgacttcctttttctggagatgttctgtttggatccgtat
gttcttgtggaccgaaagtttcagccctacaagcctttttactatattttagacatcact
tatggaaaggaagatgttcccctctcctgtgtcaatgaaattgacacaactcccccaccc
caggtggcctatagcaaggaacggatcccaggcaagggtgttttcattaacacaggccct
gaatttctcgttggctgtgactgcaaggatggttgtcgtgacaagtccaagtgtgcctgc
catcaactgactatccaggctacggcctgcacccctggtggccaagtcaaccctaactct
ggctaccagtacaagagactagaagagtgtctgcccacgggggtatatgaatgtaacaaa
cgctgtaaatgtgacccacacatgtgcacaaatcgattagtgcagcatggactacaggtt
cggctacagctattcaagacacagaacaagggctggggtatccgctgcttggatgacatt
gccaaaggctcttttgtttgtatttatgcaggcaaaatcctgacagatgactttgctgac
aaggagggcctggaaatgggtgacgagtactttgcaaatctggaccatattgagagcgta
gagaacttcaaggaaggatatgagagtgatgtcccctgttcctctgatagcagtggtgta
gatttgaaggaccaagaagatggcaacagtggtacagaggaccctgaagagtccaatgat
gatagctcagatgataacttctgtaaggatgaggacttcagcaccagctcagtttggcgc
agctatgctacccggaggcagacccgtggtcagaaagagaatggattgtctgagacagct
tccaaggattctcgccccccagaccttgggcctccacatcttcctatcccttcctcagtc
cctgtagggggctgtaatccaccttcctccgaagagacgcccaagaacaaagtggcctca
tggttgagctgcaatagtgtcagtgaaggtggttttggtgactctgatagtcgttcatcc
ttcaagaccagtgaaggtggggagggcagggctgggggaagtcgaggagaggctgagaag
gcctctacctcgggaatggccatcaaggatgaaggagacatcaagcaggctaagaaagag
gaccctgatgaccggaacaagatgtccttagttactgaaacctctcgaaattatggttac
aatccttctcctgtgaagcctgaaggacttcgccgtccacctagtaagactagtatgcat
cagagccggcgactcatggcttctgcccagtccaaccctgatgacatcctgacactgtcc
agcagcacagaaagtgagggagaaagtgggaccagccgaaagcctactcctggtcagact
tcagccacagcagttgacagtgatgatatccagaccatctcctctggctctgaaggggat
gactttgaggacaagaagaacatgtctggtccgacaaagcgccaggtggcagtaaaatca
acccggggctttgctcttaaatcaacccatgggatagccattaaatcaaccaacatggcc
tctgtggacaagggggagagtgcacctgttcggaagaatacacgccagttctacgatggt
gaagagtcttgctatatcatcgatgccaagcttgaaggcaacttgggccgctacctcaat
catagttgcagccccaacctgtttgttcagaatgtctttgtggatacccatgatcttcgc
ttcccttgggtggccttctttgccagcaagagaatccgggctggaacagaacttacttgg
gactacaactatgaggtgggcagtgtggaaggcaaggagctgctctgctgctgtggggcc
atcgaatgcagagggcgtcttctttag
DBGET
integrated database retrieval system
