Marmota marmota marmota (Alpine marmot): 107156994
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Entry
107156994 CDS
T09644
Symbol
Kdm2a
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107156994 (Kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmma03000
]
107156994 (Kdm2a)
04121 Ubiquitin system [BR:
mmma04121
]
107156994 (Kdm2a)
03036 Chromosome and associated proteins [BR:
mmma03036
]
107156994 (Kdm2a)
Enzymes [BR:
mmma01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
107156994 (Kdm2a)
Transcription factors [BR:
mmma03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107156994 (Kdm2a)
Ubiquitin system [BR:
mmma04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107156994 (Kdm2a)
Chromosome and associated proteins [BR:
mmma03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107156994 (Kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107156994 (Kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
107156994
NCBI-ProteinID:
XP_015358689
Ensembl:
ENSMMMG00000021919
UniProt:
A0A8C6A667
LinkDB
All DBs
Position
Unknown
AA seq
1163 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGEEEGVDREPRRLSNRRSVLTSPVANGVNLDFDGLGKTCRSLPSLKKT
LSGDSSSDSSRGSHNGQVWDPQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPVSPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PAQTPQRGDEEGLGGEEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWM
SVFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDL
SWTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQI
RDLLTPSADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTD
QSSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEH
FISDLSINSLYCLSDEKLIQKIS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcgttacagccagagattgcgtggtaccatgagacga
cgctatgaagatgatggcatttcagatgatgaaattgaagggaaacgaacttttgacttg
gaagagaaactccacaccaataaatataatgccaattttgttacttttatggagggaaaa
gattttaatgtagagtatatccagcggggtggcttgagagaccctctgattttcaaaaat
tctgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgttgggagtcgtcggatggtggatgtcatggatgtgaacacacaaaaaggcattgaa
atgactatggctcagtggacacgctactatgagaccccagaggaggagcgagagaaactt
tataatgtcatcagtctagaatttagccacaccaggctggagaacatggtgcaaaggcct
tccacggtggatttcattgactgggtagacaacatgtggccaaggcatttgaaggaaagt
cagactgaatcaacaaatgccattctggagatgcagtaccctaaagtgcagaagtactgt
ctaatgagtgttcgaggctgctatactgacttccatgtggactttggtggtacctctgtt
tggtatcatatccaccaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaactggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtatcagattgccagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagatacattagtgtttggaggcaattttttg
catagcttcaacatccccatgcagttaaagatatacaacattgaagatcggactcgggtt
ccaaataagttccgctatccattctattatgagatgtgttggtacgtgttagagcgctat
gtatactgtataaccaaccgctcccacctaactaaggaatttcagaaagaatccctcagc
atggatttggaattaaatgggttggagtctggaaatggagaagaagaaggagtcgaccga
gaaccccgacgcttgagcaataggcgttctgtcctcactagccctgtagccaatggtgtc
aacctggattttgacggactgggcaaaacttgccgaagtcttccaagtctgaagaaaact
ttgtctggggattcatcctctgactctagtcggggctcccacaatggtcaagtgtgggat
ccccagtgtagtccccgaaaggacaggcaagtgcatttgacccattttgagcttgaaggc
cttcgctgccttgtagataagttggagtctctgccactgcacaagaagtgtgtccccaca
gggatagaagatgaagatgctctcattgctgatgtaaagattttgctggaggagcttgcc
aatagtgatcccaagttagccctcactggagtccctatagtacagtggccaaaaagggat
aagcttaaattccccaccaggccaaaggtgcgggttcctaccatccccatcacaaagcct
cacactatgaagccagcaccacggttaacacctgtgaggccagcagcagcctcacccatt
gtgtctggagccaggcggagaagagtgcgctgtcgcaaatgcaaagcctgtgtgcaagga
gaatgtggtgtttgccactactgcagggacatgaagaagtttggaggtcctggacgaatg
aagcagtcctgtgtcctccgacagtgcttggcacccagactgcctcactcagtcacatgt
tccctttgtggagaggtggatcagaatgaggagacacaggactttgagaaaaaactcatg
gaatgctgtatctgtaatgagattgttcatcctggatgcctgcagatggatggagaggga
ttgcttaatgaggaattgccaaattgctgggaatgtccgaagtgttaccaggaggacagc
tcggagaaggcccagaagcggaaaatggaagagagtgatgaagaagccgtacaagccaaa
gtcctgcggcccctgcggagctgcgacgagcccctcacacccccgcctcactcacccact
tccatgctgcagctcatccatgaccctgtttccccccggggtatggtgactcggtcatcc
cctggggctggccccagcgaccaccacagtgccagccgtgatgagcgcttcaaacggcgg
cagttgctgcggctgcaagccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgaaaaagccaagatccggggatcgtacctcact
gtcacgctacagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccattctccccgtgtgctagtgcagcactgc
ccagcccaaaccccccaacgtggggacgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaat
ggccggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatg
tctgtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacg
tggtataaatggtgctgcgacaagagactttggacaaaaattgacttgagtaggtgtaag
gccattgtaccccaggctctcagtggcatcatcaagaggcaaccagttagccttgacctc
agttggaccaatatctccaaaaagcagctgacatggctggtcaataggctgccaggactg
aaagacctcctcctagcaggctgctcgtggtctgcagtctctgccctcagcacctccagc
tgcccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaatt
cgggacttgctgactccatcggccgataagccgggtcaggacaatcgcagcaagctccgg
aacatgactgacttccggctggcaggccttgacatcacggatgccacgcttcgcctcatc
attcgccacatgcccctcttgtctcgactcgaccttagtcactgcagccaccttacagat
cagtcctccaacttactcactgccgtcgggtcttccactcgctattccctcacagagctc
aatatggcaggttgcaataaattgacagaccagacgctgatctacctacggcgcatcgcc
aatgtcaccttgatcgaccttcgaggatgcaagcagatcactcgaaaagcctgtgagcac
ttcatctcagacttgtccatcaacagcctctactgcctgtctgacgagaagctgatacag
aagatcagctaa
DBGET
integrated database retrieval system
