Marmota marmota marmota (Alpine marmot): 107158340
Help
Entry
107158340 CDS
T09644
Symbol
Scn4a
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mmma04040
]
107158340 (Scn4a)
Ion channels [BR:
mmma04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107158340 (Scn4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
107158340
NCBI-ProteinID:
XP_015360302
Ensembl:
ENSMMMG00000010268
UniProt:
A0A8C5Z8M2
LinkDB
All DBs
Position
Unknown
AA seq
1847 aa
AA seq
DB search
MASSSLPTLVPIGPDCLRPFTRESLAAIERRAAEGEARLQRNKQMEIEEPEQKPRSDLEA
GKNLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKSIFRFSATPALYMLSPFSIV
RRGAIKVLIHSLFSMFIMITILTNCVFMTMSDPPSWSKDVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVITMAYVTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRQKCVRWPPPFNDTNTTWYGKDTW
YANDTWNTNDRWYANDTWNFNDSWASNYTFDWDAYINDEANYYFLEGASDALLCGNSTDA
GHCPEGYECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIF
FVVIIFLGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKLKKHQEELEKAK
ATQALEGVEADGDPAHSQACNGSLDTSPGEKGPPRPSCSADSGISDAMEELEEAHQKCPP
WWYKCAHKVLIWNCCTPWVKFKHIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEHF
DNVLSVGNLVFTGIFTAEMVLKLIAMDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLS
VLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSY
KECVCKIAADCSLPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVM
VIGNLVVLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIARIKWGISFAKTFLLGLLHG
KILSPKEIILSIGELGGTEEAGEAREGAPKDEKKEPPPEEGDKDLKKDNHILNHMGLVDG
PPSSIELDHLNFINNPYLTIQVPIASEESDLEMPTEEETDTFSEPEDVKKPPQPLYDGNS
SVCSTADYKPPEEDPEEQAEEDPEGEQPEECFTEACVQRCPCLYVDISQGRGKMWWTLRR
ACFKIVEHNWFETFIVFMILLSSGALAFEDIYIEQRRVIRTILEYADKVFTYIFILEMLL
KWVAYGFKVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSR
FEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDISE
VNNKSECESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQ
PQYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNA
MKKLGSKKPQKPIPRPQNKIQGMVYDFVTKQVFDITIMILICLNMVTMMVETDDQSQLKV
DILYNINMVFIIIFTGECVLKMFALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFV
SPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMS
NFAYVKKESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGT
SVRGDCGNPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYE
TWEKFDPDATQFIDYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFA
LTKEVLGDSGEMDALKQTMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHL
LQRSVKQASYMYRHSQDGSGDGAPEKEGLIASTMSKMYGPENGNSAAQSQGEEKSPSGET
GPTTTGLTPVSPSDTTPPTPVSPSEAALPSSPPPGQTVRPGVKESLV
NT seq
5544 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcatctctgcccaccctggtgcccatcggccccgactgcctgcgccccttc
acccgggagtccctggcagccatagaacggcgggcagcggagggggaggcccggctgcag
cggaacaagcagatggagatcgaggagcccgaacagaagccgcgcagtgacctggaggcc
ggcaagaacctgcccctcatctatggggaccccccgccggaggtcatcggcatccccttg
gaggacctggatccctactacagtgacaagaagaccttcatcgtgctcaacaagggcaag
tccatcttccgcttctccgccacgcctgccctctacatgctgagccccttcagcatcgtc
aggcgtggcgccatcaaggtgctaatccactcgctcttcagcatgttcatcatgatcacc
atcctgaccaactgtgtgttcatgaccatgagtgacccgccttcctggtccaaggacgtg
gagtacaccttcacggggatctacacctttgagtccctcatcaagatgctggccaggggt
ttctgcatcgatgacttcacattcctccgtgacccctggaactggctggacttcagtgtc
atcacgatggcgtacgtgacagagtttgtggacttgggcaacatctcagctctaaggacc
ttccgggtgctgcgggccctgaaaaccatcaccgtcatcccagggctgaagacgattgtg
ggggccctgatccagtccgtgaaaaagctgtccgacgtaatgatcctcaccgtcttctgc
ctgagcgtctttgccctggtcgggctgcagctcttcatgggcaacctgcggcagaagtgc
gtgcgctggcccccgcccttcaacgacaccaacaccacgtggtacggcaaggacacctgg
tacgccaacgacacctggaataccaatgacaggtggtatgccaacgacacgtggaacttc
aacgacagctgggccagcaactacacctttgactgggatgcctacatcaatgacgaagca
aactactacttcctggagggcgccagtgatgccctgctgtgtgggaacagcactgatgct
gggcactgccctgagggttacgagtgcatcaaggctgggcggaaccccaactacggctac
accagctatgacactttcagctgggccttcctggctctcttccgcctcatgacacaggac
tactgggagaacctcttccagctgacccttcgagcggccggcaagacctacatgatcttc
tttgtggtcatcatcttcctgggctctttctacctcatcaatctgatcctggccgtggtg
gccatggcgtatgccgagcagaacgaggccaccctggctgaggatcaggagaaagaggag
gagtttcagcagatgctcgagaaattaaaaaagcaccaggaggagttagaaaaggccaag
gccacccaggctctggaaggtgtggaggcagacggggacccggctcacagtcaggcctgc
aatggcagcctggacacatcgccaggagagaaggggcccccgaggccgagctgcagcgca
gacagtggtatctctgatgctatggaggagttggaggaggcccaccagaagtgcccacca
tggtggtacaagtgcgcacacaaagtgctcatatggaactgctgcaccccgtgggtgaag
ttcaagcatatcatccacctgatcgtcatggaccccttcgtggacctgggcatcaccatc
tgcatcgtgctcaacaccctcttcatggccatggagcactaccccatgacggagcacttc
gacaacgtgctttctgtgggaaacctggtcttcacaggcatcttcacggctgagatggta
ctgaagctgatcgccatggacccctacgagtatttccagcagggctggaacatcttcgac
agtttcatcgtcaccctcagcctggtggagctgggcctggccaacgtgcaggggctgtct
gtgctccgctccttccgactgctgcgggttttcaagctggccaagtcgtggccgacgctc
aacatgctcatcaaaatcatcggcaattccgtgggggcgctgggcaacctgacgctggtg
ctggccatcatcgtgttcatcttcgccgtggtgggcatgcagctatttggcaagagttac
aaggagtgcgtgtgcaagatcgctgccgactgcagcctgccccgctggcacatgcacgat
ttcttccactccttcctcatcgtcttccgcatcctgtgtggggagtggatcgagaccatg
tgggattgcatggaggtggctggccaggccatgtgcctcaccgtcttcctcatggtcatg
gtcatcggcaacctggtggttctgaacctgttcctggccctcctgctgagctccttcagt
gccgacagcctggcggcctcagacgaagacggcgagatgaacaacctgcagatcgccatc
gcgcggatcaagtggggcatcagcttcgccaagaccttcctcctggggctgctacacggc
aagatcctgagccccaaggagatcattctcagcatcggggagcttggaggcactgaggag
gctggcgaggccagggaaggtgcccccaaggatgagaagaaggagccaccacccgaggag
ggggacaaggacctgaagaaggacaatcacatcctgaaccacatgggcctggtggacggc
cctccctccagcatcgagctggaccacctcaacttcatcaacaacccctacttgaccatc
caggtgcccatcgcctccgaggagtctgacctggagatgcccaccgaggaggagaccgac
accttctcagagcctgaggatgtcaagaagccgccgcagcccctctacgatgggaactcc
tccgtctgcagcacggctgactacaagccccccgaagaggaccccgaggagcaggctgag
gaggaccccgagggggagcagcctgaggagtgcttcacggaggcctgtgtgcagcgctgc
ccctgcctctatgtggacatctcccagggccgcgggaagatgtggtggaccctccgcagg
gcttgcttcaagattgttgagcacaactggttcgagaccttcattgtcttcatgatcctg
ctcagcagtggggccctggccttcgaggacatctacatcgagcagcggcgggtcatccgc
accatcctggaatatgctgacaaggtcttcacctacatcttcatcctggagatgctgctc
aagtgggtggcctacggcttcaaggtgtacttcaccaacgcctggtgctggctcgacttc
ctcatcgtggatgtctccatcatcagtctggtggccaactggctgggctactcagagctg
ggtcccatcaaatccctgcgcacgctgcgggccctgcgtcccctgagggcactgtcccga
ttcgagggcatgagggtggtggtgaacgccctcctgggcgccatcccctccatcatgaac
gtgctgcttgtctgcctcatcttctggctcatctttagcatcatgggtgtcaacttgttt
gctggaaagttctactactgcatcaacaccaccacctcagagaggttcgacatctccgag
gtcaacaacaagtctgaatgcgaaagcctcatgcacacgggccaggttcgctggctcaat
gtcaaggtcaactacgacaacgtgggtctgggctacctctccctcctgcaggtggccacc
ttcaagggttggatggacatcatgtatgcagctgtggactcccgggagaaggaggagcag
cctcagtacgaggtgaacctctacatgtacctctacttcgtcatcttcatcatcttcggg
tccttcttcacgcttaacctcttcatcggcgtcatcatcgacaacttcaaccagcagaaa
aagaagtttggagggaaagacatcttcatgacagaggaacagaagaagtactataacgcc
atgaagaagcttggctccaagaagccccagaagccaattccccggccccagaacaagatc
cagggcatggtgtatgacttcgtgacgaagcaggtgttcgacatcaccatcatgatcctc
atctgcctcaacatggtcaccatgatggtggagacggacgaccagagccagctcaaggtg
gacatcctgtacaacatcaacatggtcttcatcatcatcttcacgggggagtgcgtgctc
aagatgttcgccctgcgccagtactacttcaccgtcggctggaacatcttcgacttcgtg
gtggtcatcctgtccattgtgggcctcgcactgtcggacctgatccagaaatacttcgtg
tcacccacgctgttccgtgtgatccgtctggctcggatcgggcgtgtcctgcggctgatc
cgcggagccaagggcatccggacgctgctcttcgccctcatgatgtcgctgcctgccctc
ttcaacatcggcctcctcctcttcctggtcatgttcatctactccatcttcggcatgtcc
aactttgcctacgtcaagaaggaatcgggcattgacgacatgttcaacttcgagaccttc
ggcaacagcatcatctgcctctttgagatcaccacgtcggctggctgggacgggcttctg
aaccccatcctcaacagtggacccccggactgcgaccccacgcttgagaacccaggcacc
agtgtcaggggcgactgtggcaacccgtccatcggcatctgcttcttctgcagctacatc
atcatctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaatttcaac
gtggccaccgaggagagcagcgagcccctcggcgaggatgactttgagatgttctatgag
acctgggagaagtttgaccccgatgccacgcagttcatcgactacagccgcctctcggac
ttcgtggacactttgcaggagccgctgaggatcgccaagcccaacaagatcaagctcatc
acactggacctgcccatggtaccgggggacaagatccactgcctggacatcctctttgcc
ctgaccaaagaggtgctgggcgactctggggaaatggacgctctcaagcagaccatggag
gagaagttcatggcggccaacccctccaaggtctcctacgagcccatcaccaccaccctc
aagaggaagcacgaggaggtgtgcgccatcaagatccagagggcctaccgccggcacctg
ctgcagcgctctgtgaagcaggcctcctacatgtaccgccacagccaggacggcagcggg
gacggggcccctgagaaggaggggctcatcgccagcaccatgagcaagatgtacggcccc
gagaacgggaacagcgctgcgcagagccagggggaggagaagagcccctcaggggagacg
gggcccaccaccacggggctcacgcctgtcagcccctcagacaccaccccgcctactcct
gtgagcccctcagaggccgccctgccttcctccccgccaccagggcagacagtgaggcca
ggggtcaaagagtctctcgtctag
DBGET
integrated database retrieval system
