Marmota marmota marmota (Alpine marmot): 107159404
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Entry
107159404 CDS
T09644
Symbol
Nlrp1
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 isoform X1
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
mmma
Marmota marmota marmota (Alpine marmot)
Pathway
mmma04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mmma00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107159404 (Nlrp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mmma04131
]
107159404 (Nlrp1)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mmma04054
]
107159404 (Nlrp1)
Membrane trafficking [BR:
mmma04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
107159404 (Nlrp1)
Pattern recognition receptors [BR:
mmma04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107159404 (Nlrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
CARD
PYRIN
NOD2_WH
LRR_6
AAA_16
NPHP3_N
NB-ARC
nSTAND3
Herpes_U30
AAA_14
AAA_22
AAA_33
AAA
VapE-like_dom
Zeta_toxin
AAA_5
AAA_30
Motif
Other DBs
NCBI-GeneID:
107159404
NCBI-ProteinID:
XP_015361486
Ensembl:
ENSMMMG00000018651
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
MARGTQDQLAHYLELLPKEELKEFQLRLSNKTLFGCSSGVTPAQPEKASGTEVASQLVAQ
YGEQRAWDLAFHTWEQMGLSLLCAQAQAKTTLTSTHSSLIIGSPNTPAMESPSWPTSTEV
LKFWNFPCTGSTQESKRIFPVTPSHIQKGNPPLFLHRAPSSSTDQESPSQESPNAPTSTV
LGGWEPPPQTNAEPRHQGGPETERLLAETSGNYYRGIRERYQNQRREKLHHAQSWKNDNM
HQKFTQLLLLQKPHPRGQDPLARKSWHRDVVEEQGHLIEIRELFGPGPGFQKEPHIVILH
GAPGIGKSTLARQVRGAWEEGQLFRDHFQHIFYFSCRELAQCKLVSLAELISEDGTAPTA
PIRQILSQPEQLLFILDGIDEPKWVLENQSPELCVHWSQSQPVHTLLGGLLGKAILPEAS
LLVTSRTTDLQKLIPSLKQPRWVEVLGFSESGRKEYFYKYFTDESQANKAFTMLESNPEL
LTLCLMPLVSWMVCTYLKENMELGKELPPTIQTITSLCMHYLFQAFPAPHLGTQLKDFCS
LAAEGLWQRKTVFSAGDLRKHELNEAIITIFLKRGVLHKGPDSLTYSFIHLCFQEFFAAM
SYALRDKEERSQSPDGLGGMEELLDVYGRNNLFGAPTVRFLFGLLSDHWSRATEKPFTFQ
LSPERKWELLQWVEAKSPPGQPHSLEFLHCLYETQDEEFLMQAMDCFQRTRMYVQTDMEL
LVFIFCIKFCSHVKRLQLNEGPQKGQGWRPPGVVLSRWVPITDNSWQVLFSTLRVSGGLR
ELDLSGNSLSHSAVQNLRKTLRQPLCYLETLRLASCGLTAESCKDLAIGLSTSQTLTELE
LNFNLLTDAGAQHLFQSLSQRYCKLQRLRLVSCGLTSSCCQDLASALSISPRLLELDLQQ
NNLGDHGVRLLYKGLKHPACQLTLLWLDYIPLSDQVREELKALEEEIPRLLISSRCRKPS
VMIPIGDPDEGQMGENMSSLKRQRPQSEESSPQVAQVEPFHLSSHASNEDLHMELLGTED
NFWGPTGPVATEMVDKEKSLYRVHFPMAGSYCWSNTGLTFVVRRAVTIEIEFCVWDQFLG
NTIPTQSWMVAGPLFDIKAEQGAVAAVYLPHFVALQEGHVDISLFHVAHFKEEGMLLEKP
SRVEPHYAVLEDPSFSPMGILLRMIPTALCFIPITSTTLLYHQLHPKEITSFHLYLIPSD
CSIQKAIDDEEKKFQFVRIHKPPPVTPLYLGSRYTVSASRKLEIIPKELELCYRSPREPQ
LFSEFYIGHLGSGIKLQIKNKKGGTVVWKALLKPGDLRPAATPIPPVTKDTLGSLHFVDR
HREQLVARVTSVDPVLDKLHGQVLSEEQYEKVRAEPTKPGQMRKLFSFSRSWDWACKDQL
YRALKEIHPHLIVELWEKWGGDLGSL
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggccagagggacccaggaccagctggctcattacctggagctactgccgaaagaggag
ctgaaggaattccagcttcggctatccaacaaaacactctttgggtgttcttctggtgtg
acaccagctcaaccagagaaggcaagtggcacggaggtggcctcacaactggtggctcag
tatggggagcagcgagcctgggacctggccttccatacctgggaacagatgggcctgagt
ctgctgtgtgcccaggcccaggcaaagacgaccttgacttcaacccactcttccttaatc
atcggctccccaaatacacccgccatggagtcccctagctggcccacctccacagaagtg
ctgaagttctggaattttccttgcacggggtccacccaggaatcaaagagaatttttcct
gtaacacctagccacatccagaaaggaaatcctcccttgttcctccaccgagctccttca
agctccacagaccaggagtctccaagccaagagtcacccaatgcccccacatccacagtg
ctggggggctgggaacctccacctcaaaccaatgcagaaccaaggcatcagggaggtcct
gagactgagaggcttctggctgaaacatctggaaattattacagaggaatcagagaaaga
tatcaaaaccagagaagagaaaagctccaccacgcacaatcctggaaaaatgacaatatg
caccaaaaattcacacagctgctacttctacaaaaacctcatcccagaggccaggatccc
ctggccaggaaaagctggcatcgtgatgtagtggaggagcaaggacatttgattgagatc
cgtgaattatttggcccaggcccaggtttccagaaagaacctcatattgtcatactgcat
ggggctcctggaattggaaagtcaacactggccaggcaggtgaggggagcctgggaagaa
ggccagctgttcagagaccacttccagcacatcttctacttcagctgcagagagctggcc
caatgcaagttggtgagtctggctgagctcatctcagaagatgggacagcccctacagca
cccatcaggcagatcctgtctcaaccagagcaattgctcttcatcctggatggtatcgat
gagccaaaatgggtcttggagaatcagagtcctgagctctgtgtgcactggagccagtca
cagcccgtgcatacactcctgggtggtttgctggggaaagccatactccctgaggcctcc
ttgctggtcacatctcggaccacagatctgcagaaactcattccttccttgaagcaacca
cgttgggtagaagtcctgggcttctctgagtctggcaggaaagaatatttctacaaatat
ttcacagatgaaagccaagcaaacaaagcctttactatgctggaatcaaaccctgagctc
ttgacgttgtgtctcatgcccttggtgtcctggatggtctgcacgtacctgaaggagaac
atggagttggggaaagaactcccacccaccattcagaccatcacaagcctgtgtatgcac
taccttttccaggcctttccagctccacacctagggacacagctcaaggacttctgttct
ttggctgctgaaggcctctggcaaagaaagactgtgttcagtgcaggtgacctcaggaag
catgagttaaatgaagccatcatcaccattttcttgaagaggggtgttctccacaagggc
cctgactccctgacctacagcttcattcatctctgtttccaggagttctttgcagcaatg
tcctacgccttgagggataaggaggaaagaagccaaagtcctgatggccttggaggtatg
gaagagctgctagatgtgtatggaaggaacaacctctttggggcaccaactgtgcgcttc
ctgttcggcctcttaagtgatcactggtcaagagcaacagagaaacccttcaccttccag
ttgtctccggaaaggaaatgggagctgctgcaatgggtggaggccaaatccccaccagga
caaccacactctctggagtttctccattgtttgtatgagactcaggatgaggaattccta
atgcaagccatggactgtttccaaagaacaaggatgtatgtccagacagacatggagctt
ctggtgttcattttctgcattaaattctgcagtcatgtgaagaggcttcagctgaatgag
ggcccacagaagggacaaggatggagaccccctggagttgtcctgtccagatgggtcccc
atcactgacaacagctggcaggttctcttctctactctcagggtcagtggaggcctgagg
gagctggaccttagtggaaattcgctaagtcactctgcagtgcagaatcttcgtaagacc
ctgagacaacctctgtgctacctggagaccttgaggttggccagctgtggcctcaccgct
gaaagctgcaaagaccttgccatagggctgagcaccagccagaccctgactgagctggag
ctgaacttcaacttgctaacagatgctggagcccagcaccttttccagagtttgagtcag
aggtattgcaagctacagcgattgcgactggtcagttgtggcctcacttccagctgctgc
caggacctagcctctgcactcagcatcagccccagactgttggagctagacctgcaacag
aataacctgggcgaccatggagtgaggctgctctacaaggggctcaagcatccagcctgc
caactcacactcctgtggctggactacatccctttgagtgaccaggtgagggaagagctg
aaggccctggaagaagagatacccaggctgctcatctccagcagatgcaggaagccaagt
gtgatgatccctattggggacccggatgaaggacagatgggtgagaacatgtcctcactc
aagcggcagagaccacaatcagaggaaagctccccacaagtagcacaagtagaacccttc
catctgtcttctcatgcctctaatgaggacttgcacatggagcttctggggactgaagat
aacttctggggccccacagggcctgtggctactgagatggtagacaaagagaagagcttg
taccgagttcatttccccatggctggctcctactgttggtccaacacgggtctcaccttt
gtggtgagaagggcggtgaccatcgagattgagttctgtgtgtgggaccagttcctgggc
aacactatcccaacgcagagctggatggtggcagggcctctgtttgacatcaaagctgaa
cagggagctgtggccgctgtgtacctgcctcactttgtggccctccaagaggggcatgtg
gacatctccctgttccatgtggcccactttaaagaggaagggatgctcctggagaagcca
agcagggtggagccacactatgcagtcctggaggaccccagcttctccccgatgggaatc
ttgctgagaatgatccccaccgccctgtgcttcatccccatcacctccaccacactgctg
taccatcaactccatcccaaggagatcacctccttccacctctacctgatccctagtgac
tgctccattcagaaggccatagatgatgaagaaaagaagttccaatttgtgcgaatacat
aagccacccccagtgacccccctttacctgggatcccgctatactgtgtctgcttcaagg
aagctggaaatcatccccaaggaattggagctctgctatcggagccccagagaacctcag
cttttctctgagttctacattggccacttggggtcagggatcaagctgcaaatcaaaaac
aagaaaggtggaactgtagtatggaaggccctgctgaaaccaggagacctcagacctgca
gccactccgatccctccagtcaccaaagataccttgggctcactgcactttgtggaccgg
catcgggaacagctggtggcccgagtgacatctgtggaccctgtcttggacaagctgcat
ggacaggtgctgagcgaagaacagtatgagaaggtacgggcagagcccaccaagccaggc
cagatgcgcaagctctttagcttcagccggtcctgggactgggcctgcaaagaccagctc
taccgagccttgaaggagatccatcctcatctgattgtggaactctgggagaagtggggg
ggagacttagggagtctctga
DBGET
integrated database retrieval system
