Mesomycoplasma moatsii: V5E84_01960
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Entry
V5E84_01960 CDS
T10790
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mmoa Mesomycoplasma moatsii
Pathway
mmoa03030
DNA replication
mmoa03410
Base excision repair
mmoa03420
Nucleotide excision repair
mmoa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V5E84_01960 (ligA)
03410 Base excision repair
V5E84_01960 (ligA)
03420 Nucleotide excision repair
V5E84_01960 (ligA)
03430 Mismatch repair
V5E84_01960 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmoa03032
]
V5E84_01960 (ligA)
03400 DNA repair and recombination proteins [BR:
mmoa03400
]
V5E84_01960 (ligA)
Enzymes [BR:
mmoa01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
V5E84_01960 (ligA)
DNA replication proteins [BR:
mmoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
V5E84_01960 (ligA)
DNA repair and recombination proteins [BR:
mmoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
V5E84_01960 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V5E84_01960 (ligA)
MMR (mismatch excision repair)
DNA ligase
V5E84_01960 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
V5E84_01960 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
HHH_5
BRCT_2
PTCB-BRCT
Nlig-Ia
DNA_ligase_ZBD
Arg_repressor
Motif
Other DBs
NCBI-ProteinID:
XLO82599
LinkDB
All DBs
Position
417307..419301
Genome browser
AA seq
664 aa
AA seq
DB search
MNSKIKEKIKTLVKLINKWNKEYFDNESPSVSDRVYDSHLKELTELEKQYPQFILKNSPT
QKIGASLKSKFKKVIHSKLMLSLNKAYDFNDLKKFFNDVYQVNLDKNIRFLVQPKIDGLS
ISLKYENGILIQAVTRGDGQIGEDVTSNIKNVIEDIPTNIEYKNPLEVRGEIYISKTNFN
KIVKEENANYANARNLASGTLRQLDSNIVKKRNLSSFIYEIVDCEKHKIYTQEELINFLK
KYNFSFLSDYLIEKLENQNKIFDFILDFEKNKRDHLEYDIDGIVIKLNEMKYYEDIGYTS
KFPKYAIAYKFDEELVQTILEDIFITIGRTGIVTYNAKLTPILLKGTIVSAATLHNYNYV
EELGININDEVTIKKAGEIIPKVVSLSKKKSEGVFNKILTCPHCNSPLIDTKTLNNQMCI
NNNCPEINIKKIIHFTSKGAMNIEGLGEGIVRKFYEFGFLKKIEDIYKLEKYKKDIISKK
GFGEKFWKNLIDGINSSYKVKLSNLIFALGIPQLGSKNAKMIANKIKKFDQIFNLTNESL
LSIKDIGEITIDEFNEYIKKEENINLINYLISININPEVKTDSTNKIPFFEGKTFVISGT
FNISRNELTNIIEINGGNVSSNISKKTDALLLGDNGGSKKEKAEKFNVKIVTKKEVETIL
KISL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgaattcaaagatcaaagaaaaaattaaaacattagttaaactaataaataaatgaaac
aaagagtattttgataacgaatcaccctcagtaagtgatcgtgtttatgattctcattta
aaagaattaactgaactagaaaaacaatatcctcaatttattttaaaaaattctcccaca
caaaaaattggagcttctttaaaatctaaattcaaaaaagttattcattctaaattaatg
ctatcattaaacaaagcttatgattttaacgatctaaaaaaattttttaatgatgtttat
caagttaacttagataaaaatattagatttttagttcaaccaaaaattgatggtttatct
atctctttaaaatatgaaaacggaattttaattcaagctgttacgagaggagatggtcaa
atcggagaagatgttacatcaaatataaaaaacgttattgaagatattcctactaatatt
gaatataaaaatcctttggaagtaagaggcgaaatatatataagtaagactaacttcaat
aaaatagttaaagaagaaaatgcaaattatgcaaatgcaagaaatttagcatctggaact
ttgagacaactagatagcaatattgttaaaaaaagaaatctttcttcttttatttatgaa
attgttgattgtgaaaaacacaaaatttatacacaagaagaattaattaattttttaaaa
aaatataatttttcttttttaagtgattatctaattgaaaaattagaaaatcaaaacaaa
atttttgactttatattagattttgaaaaaaataaaagagatcatcttgaatacgacatt
gatggaattgtcattaaattaaatgaaatgaaatattatgaagatattggttatacttca
aaatttcctaaatacgcaattgcatacaaatttgacgaagaattagtgcaaactatttta
gaagatatttttattactataggaagaactggtattgttacatacaatgctaaattaacg
cccatattactaaaaggaacaattgtttcagcagcaactttacacaattataactatgtc
gaagaattagggattaatataaatgatgaagtaacaattaaaaaagccggagaaattatt
cctaaagttgtttcattaagtaaaaaaaaatctgaaggtgtgttcaataaaattttaact
tgtcctcattgcaattcaccattaattgatactaaaactttaaataaccaaatgtgcatt
aacaataattgtccagaaattaacattaaaaaaattattcattttacttctaagggcgca
atgaatattgaaggattaggagaaggaattgttagaaaattttatgaatttggtttttta
aaaaaaattgaagatatttataaattagaaaaatataaaaaagacatcatcagtaaaaaa
ggatttggagaaaaattttggaaaaatttaattgatggaataaattcttcatacaaagta
aaactaagtaatttaatatttgctcttggtattccacaattagggtctaaaaatgcaaaa
atgattgcaaacaaaattaaaaaatttgatcaaatttttaacttaacaaatgaaagtttg
ttatcgataaaagatattggcgaaataactattgatgaatttaatgagtacataaaaaaa
gaagaaaatattaatttaattaattatttaatttcaatcaatattaatcccgaagttaaa
actgatagtactaacaaaattcctttttttgaaggaaaaacatttgttattagtggtacc
tttaatatttcaagaaatgagttaacaaacattatagagataaatggcggaaatgtttca
tctaacatttctaagaaaacagatgctttactactaggagataatggaggttctaaaaaa
gaaaaagccgaaaaatttaatgttaagattgtaacaaaaaaagaagttgaaacaatttta
aaaataagtttataa
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