Mycolicibacterium moriokaense: MMOR_43870
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Entry
MMOR_43870 CDS
T06887
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mmor
Mycolicibacterium moriokaense
Pathway
mmor03030
DNA replication
mmor03410
Base excision repair
mmor03420
Nucleotide excision repair
mmor03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MMOR_43870 (ligA)
03410 Base excision repair
MMOR_43870 (ligA)
03420 Nucleotide excision repair
MMOR_43870 (ligA)
03430 Mismatch repair
MMOR_43870 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmor03032
]
MMOR_43870 (ligA)
03400 DNA repair and recombination proteins [BR:
mmor03400
]
MMOR_43870 (ligA)
Enzymes [BR:
mmor01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MMOR_43870 (ligA)
DNA replication proteins [BR:
mmor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MMOR_43870 (ligA)
DNA repair and recombination proteins [BR:
mmor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MMOR_43870 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MMOR_43870 (ligA)
MMR (mismatch excision repair)
DNA ligase
MMOR_43870 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MMOR_43870 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
HHH_5
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH
BRCT_2
SnoaL_2
HHH_8
Motif
Other DBs
NCBI-ProteinID:
BBX03451
UniProt:
A0AAD1M8F0
LinkDB
All DBs
Position
complement(4411686..4413809)
Genome browser
AA seq
707 aa
AA seq
DB search
MSPKATPDPKTTLAEQALAEQAGDDLDADLRRRWQELADEVRDHQFRYYVRDSPIISDAE
FDKLLRELQALEDEHPELRTPDSPTQLVGGAGFATDFTSAEHLERMLSLDNVFTPDELAA
WAARTKGEIGENAHYLCELKIDGVALSLVYRDGRLERAATRGDGRTGEDVTLNARTIDDI
TEKLTGTKEFPVPKVLEVRGEVFFRVADFEDLNAGLVAEGKPPFANPRNSAAGSLRQKNP
AVTARRKLRMICHGIGHTEGFRPKTLHDAYRALHAWGLPVSDHTARVQGIDAVMEHVAYW
GEHRHDVDHEIDGVVVKVDEIALQRRLGATSRAPRWAIAYKYPPEEATTKLLDIKVNVGR
TGRVTPFAFMEPVKVAGSTVSQATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVD
LRDGTEREFVMPTKCPECGTTLAPAKEGDADIRCPNSRSCPAQLRERVFHVAGRGAFDIE
GLGYEAATALLQAGVITDEGDLFTLGSADLLRTDLFRTKDGNLSANGKRLLVNLHEAKSK
PLWRVLVALSIRHVGPTAARALATEYGSLDAIMAASEEELAAVEGVGPTIAAAVKEWFTV
DWHRAIVDKWRAAGVRMADERDTSVERTLEGLSIVVTGSLTGYSRDDAKEAIVARGGKAA
SSVSKKTAYVVAGDSPGSKYDKAVELGVPILDEDAFTRLLENGPDAV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgagtcctaaggcgacccctgatccgaagaccacgttggccgaacaagcactggccgaa
caagccggggacgacctcgacgcggacctgcgtcgccggtggcaagaactggccgacgag
gtgcgcgaccaccagttccggtactacgtcagagactctccgatcatctccgacgcggag
ttcgacaagctgctgcgtgaactgcaggcactcgaagacgagcacccggaactgcgcact
cccgactcgccgacgcaactggtcggcggcgcgggcttcgccaccgatttcacctcggcc
gaacacctcgagcgcatgctgtcgctcgacaacgtgttcacccctgacgagctcgcggcg
tgggcggcacgcaccaagggcgagatcggcgagaacgcccactacctctgcgagctcaag
atcgacggcgtcgcactctcactggtctatcgcgacggacggctggagcgcgccgccacc
cggggcgacggccgcaccggcgaggacgtcacgttgaacgcgcggaccatcgacgacatt
accgaaaagctcaccggcacaaaggaattcccggtgccgaaggtgctcgaagtgcgcggc
gaggtgttcttccgcgtcgccgacttcgaagacctcaacgccgggctcgtcgccgagggc
aagccgccgttcgccaacccgcgcaacagcgcggcagggtcgctgcgccagaagaatccg
gctgtcaccgcgcgccgcaagctgcggatgatctgccacggcatcggacacaccgagggc
ttcagacccaagaccctgcatgacgcgtatcgcgcgctgcatgcgtgggggctgccggta
tccgatcacaccgcgagggtccagggcatcgacgccgtcatggaacacgtcgcgtactgg
ggcgagcaccgacacgatgtcgatcacgaaatcgacggtgtggtggtcaaagtcgacgag
atcgcgctgcagcgccgcctcggcgccacgtcgcgtgctccgcgctgggccatcgcctac
aagtatccgccggaagaggcgaccaccaaacttctcgacatcaaggtcaacgtgggccgc
accggtcgcgtcacgccgttcgcgttcatggagcccgtcaaggtcgcgggctccaccgtc
agccaggcgacgctgcacaacgcgtcggaggtcaaacgcaagggtgtgctgatcggcgac
acagtggtgatccgcaaggcgggcgacgtgattcccgaggtgctcgggcccgtcgtcgat
ctgcgtgacggaaccgaacgcgaattcgtcatgcccacaaagtgtcccgagtgcggcacc
acgctcgccccggccaaggagggcgacgccgacatccgttgtcccaattcgcggtcgtgc
ccggcgcagttgcgtgagcgcgtgttccatgtcgccgggcggggcgcgttcgacatcgag
ggacttggctacgaggcggcgactgcgctgctgcaagcgggtgtgatcaccgatgagggc
gacctgttcacgctcggcagcgccgacctgctgcggaccgacctgttcaggaccaaggac
ggcaacctgtcggccaacggcaagcgactgctggtgaatctgcacgaggcgaagtcgaag
ccgttgtggcgggtgctcgtcgcgttgtccatccggcacgtcggcccaacggccgcccgc
gcactggccaccgagtacggctcgctggacgcgatcatggccgcgtcggaggaggagctg
gcagccgtcgaaggcgtgggcccaacgatcgccgcagcggtcaaagagtggttcaccgtc
gactggcaccgcgcgatcgtcgacaaatggcgggcggccggtgtgcggatggccgacgaa
cgcgacaccagcgtcgagcgcacactcgagggactgtcgatcgtggtgaccgggtcgctg
acggggtattcgcgggacgacgcgaaggaggccatcgtcgcgcgcggcggtaaggcggcc
agttccgtgtcgaagaagacggcctacgtcgtcgcgggggattcaccgggctcgaaatac
gacaaggccgtcgaactcggcgtgccgatcctcgacgaggacgccttcacccgactgctg
gagaacggacccgacgccgtctag
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