Methanococcus maripaludis S2: MMP0537
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Entry
MMP0537 CDS
T00164
Symbol
nth1
Name
(GenBank) endonuclease III homologue
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
mmp
Methanococcus maripaludis S2
Pathway
mmp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MMP0537 (nth1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmp03400
]
MMP0537 (nth1)
Enzymes [BR:
mmp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MMP0537 (nth1)
DNA repair and recombination proteins [BR:
mmp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MMP0537 (nth1)
Prokaryotic type
MMP0537 (nth1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF123
HhH-GPD
HHH
RecR_HhH
GIY-YIG
HHH_5
DUF763
DUF7178
Motif
Other DBs
NCBI-ProteinID:
CAF30093
UniProt:
Q6LZT6
LinkDB
All DBs
Position
complement(541501..542571)
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AA seq
356 aa
AA seq
DB search
MNDFDTTFIKFLDILDEKLKKDAVVDKISKNSDKNERAFKILISTVISARTKDETTAKVS
KELFKKVKNPKDLVQIPIDELEKLVHPAGFYKTKAKNLKKLGEILIDKYNSNVPNSIEEL
VTLPGVGRKTANLVMTLAFDDYAICVDTHVHRITNRWYYADTESPENTEMDLRKKLPKNY
WKKINNLLVVFGQETCSPIPKCDKCFSEIKKICPHYNSLKEIEKIYADFNFKKTPKTKIP
KDKGTYVLKIKMNSPKTILVGKREIKFKKGDYFYIGSAMGDSMNLYNRISRHLSDSKKKR
WHIDYLLEFSNVKEVNVTLGRFECDVSQRFNLVLDSIESFGCSDCKCKSHLYYIKP
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaacgattttgacaccacctttattaaatttttagatatcctggacgaaaaattaaaa
aaagatgccgtagttgacaaaatatctaaaaattcagataaaaatgagcgggcatttaaa
atactgatttctacagttataagcgcacgtacaaaagacgaaactaccgcaaaagtttca
aaagaattgtttaagaaagtaaaaaacccaaaagaccttgttcaaatccctattgacgaa
ctcgaaaagttagtgcatccggcaggattttacaaaactaaagctaaaaatctaaaaaaa
ttaggggaaattttaattgataaatataactcaaatgttccaaattcgattgaagagcta
gtaacacttccaggggttggtagaaaaactgcaaatctggtaatgactcttgcatttgat
gattacgcaatctgtgttgacacacacgtccataggattacaaatcgatggtattatgca
gatactgagtcaccagaaaacacagaaatggatcttagaaaaaaacttccaaaaaattac
tggaaaaaaataaacaatttactcgtggtatttggacaggaaacctgcagtccgattcca
aaatgcgacaaatgcttttctgaaattaaaaaaatctgcccgcattacaattcattaaaa
gaaattgaaaaaatttacgcagattttaactttaaaaagactccaaaaactaaaatccca
aaggataaaggtacttatgtcttgaaaataaaaatgaactctccaaaaaccattctcgtt
ggaaaaagggaaattaaatttaaaaaaggagattatttctacatcggttctgcaatgggg
gacagcatgaacctttacaatagaataagccggcatttgtcagacagcaagaaaaaaaga
tggcatattgattatttacttgaattttcaaatgtaaaagaagtaaacgtaacacttgga
cgttttgagtgcgatgtttcacagcggtttaatttagttttagattcgatagagtctttc
ggatgttcggattgcaagtgtaaaagtcatttatactacattaaaccctga
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