Maricaulis maris: Mmar10_2066
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Entry
Mmar10_2066 CDS
T00394
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mmr
Maricaulis maris
Pathway
mmr03030
DNA replication
mmr03410
Base excision repair
mmr03420
Nucleotide excision repair
mmr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mmar10_2066
03410 Base excision repair
Mmar10_2066
03420 Nucleotide excision repair
Mmar10_2066
03430 Mismatch repair
Mmar10_2066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mmr03032
]
Mmar10_2066
03400 DNA repair and recombination proteins [BR:
mmr03400
]
Mmar10_2066
Enzymes [BR:
mmr01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
Mmar10_2066
DNA replication proteins [BR:
mmr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mmar10_2066
DNA repair and recombination proteins [BR:
mmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
Mmar10_2066
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mmar10_2066
MMR (mismatch excision repair)
DNA ligase
Mmar10_2066
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Mmar10_2066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
ABI66358
UniProt:
Q0AMX9
LinkDB
All DBs
Position
complement(2245860..2247965)
Genome browser
AA seq
701 aa
AA seq
DB search
MSALKDVDQLTEAEARAEHARLAREIAGHDKAYYQSDAPKISDAAYDALRRKLEAIEVRF
PQFIDLLSPTQRVGAVPSGKFGEIRHAVPMLSLGNAFNDEDVADFVGRIRRFLGLAESDV
VAVTAEPKIDGLSASLRYVGGKLVHGATRGDGQTGEDVTQNLLTLDDIPDTLPPGDWPDV
VEVRGEVYMSHADFAALNERQIEAGKDAYKNPRNAAAGSLRQIDPKMTSQRPLRFFAYAW
GEVSEPLSDTQMGAVARFGEMGFPVNDLMARCETVEALLAVYRDIEARRAGLGYDIDGVV
YKADRLDWQERLGFVARAPRWAIAHKFPAEQATTILEAIDIQVGRTGALTPVARLTPVTV
GGVVVTNATLHNQDEIERKDIRVGDTVVIQRAGDVIPQVVRVVDPDRPGRGEAFDFPTEC
PVCGSQALREHDAKTGKLDVVRRCTGGLICGAQLKERLKHFVSRKAFDIEGLGIKQIEAF
QEEGLITEPAHIFTLKARNEAGEIKPPLQEREGFGETSIRNLFTSIEDRRTITLARFLNA
LGIRHVGENTSALFARTYGSWAAFHAAAANLSDEAVRAEMLGIDGIGNAAVEALEQYFTE
AHNRDLLDRLVAQLTIEDAEAIANDSPVAGKTVVFTGALERMTRDEAKAKAQALGAKVAG
SVSGKTDYLVAGPGAGSKAKKAAELGVETLTEDEWFDLIGA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcactcaaggatgtcgaccagctgaccgaggccgaagcacgcgccgagcatgcc
cgcctggctcgcgagattgccgggcatgacaaggcctactaccagtccgacgcgcccaag
atttccgacgccgcctatgatgcgctacgccgcaagcttgaggcgatcgaagtccgcttt
ccgcagttcattgacctgctcagcccgacccagcgcgtcggcgccgtcccgtccggcaag
ttcggcgaaatccggcatgcagtaccgatgctgtcgctgggcaatgcgttcaatgacgag
gatgtcgccgattttgtcggacgcatccgccgctttctgggtctggccgagagcgatgtc
gtggcggtcactgccgagccgaagattgacggcctgtcggccagcctgcgctatgtcggt
ggcaagcttgtccatggcgccacccgcggcgatggccagaccggcgaggatgtgacgcag
aacctgctcaccctggacgatatccccgacaccttgccacccggcgactggccggacgtg
gtcgaggtgcgcggtgaggtctacatgtcgcacgccgattttgcggcgctcaatgagcgt
cagatcgaggcaggcaaggacgcctacaaaaatccgcgcaatgccgctgccggctcgctg
cgccagatcgacccgaagatgacctcccagcgccccctgcgctttttcgcctatgcctgg
ggcgaggtctccgagccgctttccgacacccagatgggagccgtggcccggttcggcgaa
atgggctttccggtcaatgacctcatggcccgctgcgaaacggtcgaggctctgctggcg
gtctatcgcgatatcgaggcaagacgggccgggctcggctatgacattgatggggtggtc
tacaaggcagaccggctggactggcaggagcgtctgggctttgtcgcccgcgctccgcgc
tgggccatcgcccacaaattcccggccgaacaggcgaccaccattctggaagccatcgac
atccaggtcggccgcaccggcgccctgacgccggtcgcccgcttgacgccggtcacggtc
ggcggtgtggtggtcaccaatgcgacgctgcacaatcaggacgaaatcgagcgcaaggat
atccgcgtcggtgacacggtggtgatccagcgcgccggcgatgttatcccgcaagtcgtc
cgcgtggtcgacccggacaggcccggtcgcggcgaggccttcgattttcccaccgagtgc
cccgtgtgcggcagccaggccctgcgtgagcacgacgccaagaccggcaagctggatgtc
gtgcggcgctgtacgggcggcctcatctgtggcgcccagctgaaggagcggttgaagcat
ttcgtatcgcgcaaggctttcgatatcgaaggcctgggcatcaagcagatcgaggccttc
caggaagaaggcctgatcaccgagccggctcatatcttcaccctcaaggcccgcaatgag
gccggcgagatcaaaccgccattgcaggagcgtgagggtttcggcgagacctcgatccgc
aatctcttcacctcgatcgaggacaggcggaccatcaccctggcgcgctttctcaacgcg
ctgggcatccgccatgtcggtgaaaacacatcggccctgtttgcccgcacctatggcagc
tgggcagccttccacgccgcggcggccaatctgtccgatgaggccgtgcgcgctgagatg
ctgggcattgacggtattggcaatgccgcggtcgaggcgctggagcagtatttcaccgag
gcccacaatcgggacctccttgaccgtctcgtcgcccaactcaccatcgaggatgccgaa
gccattgccaatgacagcccggtggccggcaagaccgtggtcttcaccggtgcgctggag
cggatgacccgcgacgaagccaaggccaaggcgcaagcgcttggtgccaaggtggcggga
tccgtatcgggcaagacggattatctggtcgccgggccgggggccggatcaaaggccaaa
aaggcggccgagctgggtgttgagacgctgaccgaagatgagtggtttgacctgatcggg
gcctga
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