Mus musculus (house mouse): 11603
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Entry
11603 CDS
T01002
Symbol
Agrn, Agrin, nmf380
Name
(RefSeq) agrin
KO
K06254
agrin
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04512
ECM-receptor interaction
mmu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
11603 (Agrn)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
11603 (Agrn)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mmu00535
]
11603 (Agrn)
Proteoglycans [BR:
mmu00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
11603 (Agrn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Kazal_2
Laminin_G_2
Kazal_1
EGF_laminin
Kazal_CFAI
EGF
SEA
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
11603
NCBI-ProteinID:
NP_001355955
MGI:
87961
Ensembl:
ENSMUSG00000041936
UniProt:
A2ASQ1
Structure
PDB
PDBj
LinkDB
All DBs
Position
4:complement(156249747..156281997)
Genome browser
AA seq
1950 aa
AA seq
DB search
MPPLPLEHRPRQQPGASVLVRYFMIPCNICLILLATSTLGFAVLLFLSNYKPGIHFTAAP
SMPPDVCRGMLCGFGAVCEPSVEDPGRASCVCKKNVCPAMVAPVCGSDASTYSNECELQR
AQCNQQRRIRLLRQGPCGSRDPCANVTCSFGSTCVPSADGQTASCLCPTTCFGAPDGTVC
GSDGVDYPSECQLLRHACANQEHIFKKFDGPCDPCQGSMSDLNHICRVNPRTRHPEMLLR
PENCPAQHTPICGDDGVTYENDCVMSRIGAARGLLLQKVRSGQCQTRDQCPETCQFNSVC
LSRRGRPHCSCDRVTCDGAYRPVCAQDGHTYDNDCWRQQAECRQQQTIPPKHQGPCDQTP
SPCRGAQCAFGATCTVKNGKAVCECQRVCSGGYDPVCGSDGVTYGSVCELESMACTLGRE
IRVARRGPCDRCGQCRFGSLCEVETGRCVCPSECVESAQPVCGSDGHTYASECELHVHAC
THQISLYVASAGHCQTCGETVCTFGAVCSAGQCVCPRCEHPPPGPVCGSDGVTYLSACEL
REAACQQQVQIEEARAGPCEPAECGSGGSGSGEDNACEQELCRQHGGVWDEDSEDGPCVC
DFSCQSVLKSPVCGSDGVTYSTECHLKKARCEARQELYVAAQGACRGPTLAPLLPMASPH
CAQTPYGCCQDNVTAAQGVGLAGCPSTCHCNPHGSYSGTCDPVTGQCSCRPGVGGLRCDR
CEPGFWNFRGIVTDGHSGCTPCSCDPRGAVRDDCEQMTGLCSCRPGVAGPKCGQCPDGQA
LGHLGCEADPTTPVTCVEMHCEFGASCVEEAGFAQCVCPTLTCPEANSTKVCGSDGVTYG
NECQLKTIACRQRLDISIQSLGPCRESVAPGVSPTSASMTTPRHILSRTLASPHSSLPLS
PSTTAHDWPTPLPTSPQTVVGTPRSTAATPSDVASLATAIFRESGSTNGSGDEELSGDEE
ASGGGSGGLEPPVGSVVVTHGPPIERASCYNSPLGCCSDGKTPSLDSEGSNCPATKAFQG
VLELEGVEGQELFYTPEMADPKSELFGETARSIESTLDDLFRNSDVKKDFWSIRLRELGP
GKLVRAIVDVHFDPTTAFQAPDVGQALLQQIQVSRPWALAVRRPLREHVRFLDFDWFPTF
FTGAATGTTAAVATARATTVSRLSASSVTPRVYPSYTSRPVGRTTAPLTTRRPPTTTASI
DRPRTPGPQRPPKSCDSQPCLHGGTCQDLDSGKGFSCSCTAGRAGTVCEKVQLPSVPAFK
GHSFLAFPTLRAYHTLRLALEFRALETEGLLLYNGNARGKDFLALALLDGHVQFRFDTGS
GPAVLTSLVPVEPGRWHRLELSRHWRQGTLSVDGEAPVVGESPSGTDGLNLDTKLYVGGL
PEEQVATVLDRTSVGIGLKGCIRMLDINNQQLELSDWQRAVVQSSGVGECGDHPCSPNPC
HGGALCQALEAGVFLCQCPPGRFGPTCADEKNPCQPNPCHGSAPCHVLSRGGAKCACPLG
RSGSFCETVLENAGSRPFLADFNGFSYLELKGLHTFERDLGEKMALEMVFLARGPSGLLL
YNGQKTDGKGDFVSLALHNRHLEFRYDLGKGAAIIRSKEPIALGTWVRVFLERNGRKGAL
QVGDGPRVLGESPKSRKVPHTMLNLKEPLYVGGAPDFSKLARGAAVASGFDGAIQLVSLR
GHQLLTQEHVLRAVDVAPFAGHPCTQAVDNPCLNGGSCIPREATYECLCPGGFSGLHCEK
GIVEKSVGDLETLAFDGRTYIEYLNAVTESELTNEIPAPETLDSRALFSEKALQSNHFEL
SLRTEATQGLVLWIGKVGERADYMALAIVDGHLQLSYDLGSQPVVLRSTVKVNTNRWLRV
RAHREHREGSLQVGNEAPVTGSSPLGATQLDTDGALWLGGLQKLPVGQALPKAYGTGFVG
CLRDVVVGHRQLHLLEDAVTKPELRPCPTL
NT seq
5853 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctctgccactggaacacagacccaggcagcagcctggtgcctccgtgctggtt
cggtacttcatgatcccctgcaacatctgcttgatcctcttggctacttctacgttgggc
tttgcggtgctgcttttcctcagcaactacaaacctgggatccacttcacagcagcgcct
tctatgcctcctgatgtgtgcaggggaatgttatgtggctttggtgctgtgtgtgaacct
agtgttgaggatccaggccgggcctcctgtgtgtgcaagaagaatgtctgccctgctatg
gtagctcctgtgtgtggctcagatgcttccacctatagcaacgagtgtgagctacagcgt
gcacagtgcaaccagcaacggcgcatccgcctactccgccaagggccatgtgggtcccgg
gacccctgtgccaatgtgacctgcagtttcggtagtacctgtgtaccttcagccgatgga
cagaccgcctcgtgtctgtgtcctacaacctgctttggggcccctgatggcacagtgtgt
ggcagtgatggtgttgactaccctagtgagtgccagctgctccgtcatgcctgtgccaac
caggagcacatctttaagaagttcgatggtccttgtgacccctgccagggcagcatgtca
gacctgaatcatatttgccgggtgaacccacgtacacggcacccagaaatgcttctgcgg
cctgagaactgccccgcccaacacacacctatctgtggagatgatggggtcacctatgaa
aacgactgtgtcatgagccgtataggtgcagcccgtggcctgcttctccagaaagtgcgc
tctggtcaatgccagactcgagaccagtgcccggagacctgccagtttaactctgtatgc
ctgtcccgccgcggccgtccccactgttcctgcgatcgcgtcacctgtgatggggcttac
aggccagtgtgtgcccaggatgggcacacgtatgacaatgactgttggcgccaacaggcc
gagtgtcgacaacagcagaccattccccccaagcaccagggcccgtgtgaccagacccca
tccccgtgccgtggagcgcagtgtgcatttggggcaacatgcacagtgaagaatgggaaa
gctgtgtgcgagtgccagcgggtgtgctcgggcggctacgatcctgtgtgcggcagtgat
ggtgtcacttacggcagtgtgtgcgagctggaatccatggcctgtacccttgggcgggaa
atccgagtggcccgcagaggaccgtgtgaccgatgtgggcagtgccggtttggatccttg
tgcgaggtggagactggacgctgtgtgtgcccctctgagtgtgtggagtcagcccagccc
gtatgtggctctgacggacacacatatgctagtgaatgtgagctgcatgtccacgcctgt
acacaccagatcagcctatacgtggcctcagccggacactgccagacctgtggagaaaca
gtttgtacctttggggctgtgtgctcagctggacagtgtgtatgtccccgttgtgagcac
cccccacctggccctgtgtgcggcagtgatggcgtcacctacctcagtgcctgtgagctc
cgagaggctgcctgtcagcagcaggtacaaattgaggaggcccgtgcagggccgtgtgag
ccggctgagtgtggctcagggggctctgggtctggggaagacaatgcgtgtgagcaggag
ctgtgtcggcagcatggtggtgtctgggatgaggactcagaagacgggccgtgtgtctgt
gactttagttgccagagtgtccttaaaagcccagtgtgtggctcagatggagtcacctat
agcacggagtgccatctgaagaaggccagatgtgaagcgcggcaagagctgtacgtcgct
gctcagggagcctgccggggccctaccttggctccactgctacctatggcctccccacac
tgtgcccaaaccccctatggctgctgccaggacaatgtcactgctgcccagggtgtgggc
ttggctggctgtcccagcacctgccattgcaacccacacggctcctatagcggcacttgt
gacccagtcacagggcagtgctcctgccgaccaggtgtaggaggcctcaggtgtgatcgc
tgtgagcctggcttctggaacttccgtggcattgtcaccgatggacatagtggttgcact
ccctgcagctgtgaccctcggggtgctgtaagagatgactgtgagcagatgactggattg
tgttcctgtagacctggtgtggctggtcccaagtgtgggcagtgtccagatggtcaagcc
ctgggccatcttggctgtgaagcagatcccacaacaccagtgacttgtgtggaaatgcac
tgtgagtttggcgcctcctgcgtagaggaggctggttttgcccagtgtgtctgcccaact
ctcacatgtccagaggctaactctaccaaggtctgtggatcagatggtgtcacatacggc
aatgaatgccagctgaagaccattgcctgccgccagcgtctggacatctccattcagagt
cttggtccatgccgggagagtgttgctcctggggtttcccctacatctgcatctatgacc
accccaaggcatatcctgagcaggacactggcgtctccccacagcagccttcctctgtct
cccagcactactgcccatgattggcccaccccattacccacatcacctcagaccgtagtc
ggcacccccaggagcactgcagccacaccctctgatgtggccagtcttgctacagcgatc
ttcagggaatctggcagcaccaacggcagtggcgatgaggagctcagtggcgatgaggag
gccagtgggggcgggtctgggggacttgagcccccggtgggcagcgttgtggtgacccac
gggccacccatcgagagggcttcctgttacaactcacctttgggctgctgctcagatggc
aagacaccctcactggactcagaaggctccaactgtccagctaccaaggcattccagggc
gtgctggagcttgagggggtcgagggacaggaactgttctacacaccagagatggctgac
cccaagtcagagttgtttggggagactgcaaggagcattgagagcacgctggacgacctg
ttccggaattcggatgttaagaaggacttctggagcatccgcctacgggaactggggcct
ggcaaattagtccgtgccattgtggatgttcactttgaccccaccacagccttccaggca
ccagatgtgggtcaggccttgctccaacagatccaggtatccaggccgtgggccctggca
gtgaggaggcctctgcgggagcatgtgcgattcttggactttgactggtttcccactttt
tttacgggagctgcaacaggaaccacagctgctgtggccacagccagagccaccactgtg
agccgactgtctgcctcttctgtcaccccacgagtctaccccagttacaccagccggcct
gttggcagaactacggcaccgctaaccactcgccggccaccaaccactaccgccagtatt
gaccgacctcggactccaggcccgcaacggcccccaaagtcctgtgattcccagccttgc
ctccacggaggtacctgccaggacctggattctggcaagggtttcagctgcagctgtact
gcaggcagggctggcactgtctgtgagaaagtgcagctcccctctgtgccagcttttaag
ggccactccttcttggccttccccaccctccgagcctaccacacgctgcgtctggcacta
gaattccgggcgctggagacagagggactgctgctctacaatggcaatgcacgtggcaaa
gatttcctggctctggctctgttggatggtcatgtacagttcaggttcgacacgggctca
gggccggcggtgctaacaagcttagtgccagtggaaccgggacggtggcaccgcctcgag
ttgtcacggcattggcggcagggcacactttctgtggatggcgaggctcctgttgtaggt
gaaagtccgagtggcactgatggcctcaacttggacacgaagctctatgtgggtggtctc
ccagaagaacaagttgccacggtgcttgatcggacctctgtgggcatcggcctgaaagga
tgcattcgtatgttggacatcaacaaccagcagctggagctgagcgattggcagagggct
gtggttcaaagctctggtgtgggggaatgcggagaccatccctgctcacctaacccctgc
catggcggggccctctgccaggccctggaggctggcgtgttcctctgtcagtgcccacct
ggccgctttggcccaacttgtgcagatgaaaagaacccctgccaaccgaacccctgccac
gggtcagccccctgccatgtgctttccaggggtggggccaagtgtgcgtgccccctggga
cgcagtggttccttctgtgagacagtcctggagaatgctggctcccggcccttcctggct
gactttaatggcttctcctacctggaactgaaaggcttgcacaccttcgagagagaccta
ggggagaagatggcgctggagatggtgttcttggctcgtgggcccagtggcttactcctc
tacaatgggcagaagacggatggcaagggggactttgtatccctggccctgcataaccgg
cacctagagttccgctatgaccttggcaagggggctgcaatcatcaggagcaaagagccc
atagccctgggcacctgggttagggtattcctggaacgaaatggccgcaagggtgccctt
caagtgggtgatgggccccgtgtgctaggggaatctccgaaatcccgcaaggtcccgcac
accatgctcaacctcaaggagcccctctatgtggggggagctcctgacttcagcaagctg
gctcggggcgctgcagtggcctccggctttgatggtgccatccagctggtgtctctaaga
ggccatcagctgctgactcaggagcatgtgttgcgggcagtagatgtagcgccttttgca
ggccacccttgtacccaggccgtggacaacccctgccttaatgggggctcctgtatcccg
agggaagccacttatgagtgcctgtgtcctgggggcttctctgggctgcactgcgagaag
gggatagttgagaagtcagtgggggacctagaaacactggcctttgatgggcggacctac
atcgagtacctcaatgctgtgactgagagcgagctgaccaatgagatcccagcccccgaa
actctggattcccgggcccttttcagtgagaaagcgctgcagagcaaccactttgagctg
agcttacgcactgaggccacgcaggggctggtgctgtggattggaaaggttggagaacgt
gcagactacatggctctggccattgtggatgggcacctacaactgagctatgacctaggc
tcccagccagttgtgctgcgctccactgtgaaggtcaacaccaaccgctggcttcgagtc
agggctcacagggagcacagggaaggttcccttcaggtgggcaatgaagcccctgtgact
ggctcttccccgctgggtgccacacaattggacacagatggagccctgtggcttggaggc
ctacagaagcttcctgtggggcaggctctccccaaggcctatggcacgggttttgtgggc
tgtctgcgggacgtggtagtgggccatcgccagctgcatctgctggaggacgctgtcacc
aaaccagagctaagaccctgccccactctctga
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integrated database retrieval system
