Mus musculus (house mouse): 17386
Help
Entry
17386 CDS
T01002
Symbol
Mmp13, Clg, MMP-13, Mmp1
Name
(RefSeq) matrix metallopeptidase 13
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu04657
IL-17 signaling pathway
mmu04926
Relaxin signaling pathway
mmu04928
Parathyroid hormone synthesis, secretion and action
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
17386 (Mmp13)
09152 Endocrine system
04926 Relaxin signaling pathway
17386 (Mmp13)
04928 Parathyroid hormone synthesis, secretion and action
17386 (Mmp13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mmu01002
]
17386 (Mmp13)
Peptidases and inhibitors [BR:
mmu01002
]
Metallo peptidases
Family M10
17386 (Mmp13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
17386
NCBI-ProteinID:
NP_032633
MGI:
1340026
Ensembl:
ENSMUSG00000050578
UniProt:
P33435
Q3U9V5
Structure
PDB
LinkDB
All DBs
Position
9:7272514..7283333
Genome browser
AA seq
472 aa
AA seq
DB search
MHSAILATFFLLSWTPCWSLPLPYGDDDDDDLSEEDLVFAEHYLKSYYHPATLAGILKKS
TVTSTVDRLREMQSFFGLEVTGKLDDPTLDIMRKPRCGVPDVGEYNVFPRTLKWSQTNLT
YRIVNYTPDMSHSEVEKAFRKAFKVWSDVTPLNFTRIYDGTADIMISFGTKEHGDFYPFD
GPSGLLAHAFPPGPNYGGDAHFDDDETWTSSSKGYNLFIVAAHELGHSLGLDHSKDPGAL
MFPIYTYTGKSHFMLPDDDVQGIQFLYGPGDEDPNPKHPKTPEKCDPALSLDAITSLRGE
TMIFKDRFFWRLHPQQVEAELFLTKSFWPELPNHVDAAYEHPSRDLMFIFRGRKFWALNG
YDILEGYPRKISDLGFPKEVKRLSAAVHFENTGKTLFFSENHVWSYDDVNQTMDKDYPRL
IEEEFPGIGNKVDAVYEKNGYIYFFNGPIQFEYSIWSNRIVRVMPTNSILWC
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcattcagctatcctggccaccttcttcttgttgagctggactccctgttggtccctg
ccccttccctatggtgatgatgatgatgatgacctgtctgaggaagaccttgtgtttgca
gagcactacttgaaatcatactaccatcctgcgactcttgcgggaatcctgaagaagtct
acagtgacctccacagttgacaggctccgagaaatgcaatctttctttggcttagaggtg
actggcaaacttgatgatcccaccttagacatcatgagaaaaccaagatgtggagtgcct
gatgtgggtgaatacaatgttttccctagaacactcaaatggtcccaaacgaacttaact
tacaggattgtgaactatactcctgatatgtcccattctgaagtggagaaggccttcaga
aaagccttcaaggtctggtctgatgtgacaccactgaatttcaccagaatctatgatggc
actgctgacatcatgatatcttttgggactaaagaacatggtgacttctacccatttgat
ggaccttctggtcttctggcacacgcttttcctcctggaccaaactatggtggggatgcc
cattttgatgatgatgaaacctggacaagcagttccaaaggctacaacttgtttattgtt
gctgcccatgagcttggccactccctaggtctggatcactccaaggacccaggagccctg
atgtttcccatctatacctacactggcaaaagccatttcatgcttcctgatgatgacgtt
caaggaattcagtttctttatggtccaggcgatgaagaccccaaccctaagcatcccaaa
acaccagagaagtgtgacccagccctatcccttgatgccattaccagtctccgaggagaa
actatgatctttaaagacagattcttctggcgcctgcaccctcagcaggttgaggctgag
ctctttttgacaaagtccttttggccagaacttcccaaccatgtggatgctgcatatgaa
catccatcccgtgaccttatgtttatctttagagggagaaaattctgggctctgaatggt
tatgacattctggaaggttatcccagaaaaatatctgacctgggattcccaaaagaggtg
aagagactgagcgctgcggttcactttgagaacacggggaagaccctcttcttctctgag
aaccacgtgtggagttatgatgatgttaaccagactatggacaaagattatccccgcctc
atagaagaggaattccctggaattggcaacaaagtagatgctgtctatgagaaaaatggc
tatatctactttttcaatgggcccatacagtttgaatacagtatctggagtaatcgcatt
gtgagagtcatgccaacaaattccatattgtggtgttaa
DBGET
integrated database retrieval system