Mus musculus (house mouse): 20562 Help Entry 20562             CDS       T01002                                  Symbol Slit1, Slil1, mKIAA0813 Name (RefSeq) slit guidance ligand 1   KO K06838   slit 1 Organism mmu  Mus musculus (house mouse) Pathway mmu04360   Axon guidance mmu04517   IgSF CAM signaling Brite KEGG Orthology (KO) [BR:mmu00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     20562 (Slit1)  09150 Organismal Systems   09158 Development and regeneration    04360 Axon guidance     20562 (Slit1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mmu00536]     20562 (Slit1) Glycosaminoglycan binding proteins [BR:mmu00536]  Heparan sulfate / Heparin   Axon guidance molecules    20562 (Slit1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LRR_8 LRR_4 LRR_5 EGF Laminin_G_2 Laminin_G_1 LRRNT hEGF LRRCT LRR_9 LRR_1 EGF_TEN LRR_14 EGF_DL_JAG LRR_EndoS EGF_Teneurin EGF_2 EGF_3 JAG1-like_EGF2 FNIP Laminin_G_3 Motif Other DBs NCBI-GeneID:  20562 NCBI-ProteinID:  NP_056563 MGI:  1315203 Ensembl:  ENSMUSG00000025020 UniProt:  Q80TR4 LinkDB All DBs Position 19:complement(41586263..41735714) Genome browser AA seq 1531 aa AA seqDB search MALTPQRGSSSGLSRPELWLLLWAAAWRLGATACPALCTCTGTTVDCHGTGLQAIPKNIP RNTERLELNGNNITRIHKNDFAGLKQLRVLQLMENQIGAVERGAFDDMKELERLRLNRNQ LQVLPELLFQNNQALSRLDLSENFLQAVPRKAFRGATDLKNLQLDKNRISCIEEGAFRAL RGLEVLTLNNNNITTIPVSSFNHMPKLRTFRLHSNHLFCDCHLAWLSQWLRQRPTIGLFT QCSGPASLRGLNVAEVQKGEFSCSGQGEAAGAPACTLSSGSCPAMCSCSSGIVDCRGKGL TAIPANLPETMTEIRLELNGIKSIPPGAFSPYRKLRRIDLSNNQIAEIAPDAFQGLRSLN SLVLYGNKITDLPRGVFGGLYTLQLLLLNANKINCIRPDAFQDLQNLSLLSLYDNKIQSL AKGTFTSLRAIQTLHLAQNPFICDCNLKWLADFLRTNPIETTGARCASPRRLANKRIGQI KSKKFRCSAKEQYFIPGTEDYHLNSECTSDVACPHKCRCEASVVECSSLKLSKIPERIPQ STTELRLNNNEISILEATGLFKKLSHLKKINLSNNKVSEIEDGTFEGAASVSELHLTANQ LESIRSGMFRGLDGLRTLMLRNNRISCIHNDSFTGLRNVRLLSLYDNHITTISPGAFDTL QALSTLNLLANPFNCNCHLSWLGDWLRKRKIVTGNPRCQNPDFLRQIPLQDVAFPDFRCE EGQEEVGCLPRPQCPQECACLDTVVRCSNKHLQALPKGIPKNVTELYLDGNQFTLVPGQL STFKYLQLVDLSNNKISSLSNSSFTNMSQLTTLILSYNALQCIPPLAFQGLRSLRLLSLH GNDVSTLQEGIFADVTSLSHLAIGANPLYCDCRLRWLSSWVKTGYKEPGIARCAGPPEME GKLLLTTPAKKFECQGPPSLAVQAKCDPCLSSPCQNQGTCHNDPLEVYRCTCPSGYKGRH CEVSLDGCSSNPCGNGGTCHAQEGEDAGFTCSCPSGFEGPTCGVDTDDCVKHACVNGGVC VDGVGNYTCQCPLQYTGRACEQLVDFCSPDMNPCQHEAQCVGTPDGPRCECMLGYTGDNC SENQDDCKDHKCQNGAQCVDEVNSYACLCVEGYSGQLCEIPPAPRSSCEGTECQNGANCV DQGSRPVCQCLPGFGGPECEKLLSVNFVDRDTYLQFTDLQNWPRANITLQVSTAEDNGIL LYNGDNDHIAVELYQGHVRVSYDPGSYPSSAIYSAETINDGQFHTVELVTFDQMVNLSID GGSPMTMDNFGKHYTLNSEAPLYVGGMPVDVNSAAFRLWQILNGTSFHGCIRNLYINNEL QDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNATPGPVCHCEAGWGGLHCDQPVDGPCHG HKCVHGKCVPLDALAYSCQCQDGYSGALCNQVGAVAEPCGGLQCLHGHCQASATKGAHCV CSPGFSGELCEQESECRGDPVRDFHRVQRGYAICQTTRPLSWVECRGACPGQGCCQGLRL KRRKLTFECSDGTSFAEEVEKPTKCGCAQCA NT seq 4596 nt NT seq  +upstreamnt  +downstreamnt atggcgctaacgccccagcgcgggtcctcttcggggttgagccgaccggagctgtggctg ctgctgtgggcagccgcgtggcgcctgggggccacggcgtgccccgccctctgcacctgc accggcactacggtggactgccacggcacgggtttgcaggccatccccaagaacatccca cggaacaccgagcgcctggaactcaacggcaacaacatcactcggatccacaagaatgac tttgctggcctcaagcagcttcgagtgttgcagctgatggagaaccagatcggagctgtg gaacgcggagcttttgatgacatgaaggagctagagcgcctacggctgaaccgcaaccag ctacaagtgttgcctgaactactgttccagaacaaccaggctctatccagactggacctg agtgagaattttctccaggctgtgcccaggaaggcttttcggggagccacagacctcaaa aatctacagctggacaagaaccggatcagctgcatcgaggaaggggccttccgtgcccta cggggactggaggttctgaccctgaacaacaacaacatcaccaccatccctgtgtccagt ttcaaccatatgcccaagcttcggaccttccggctgcactccaaccacctgttctgtgac tgccacctggcctggctctctcagtggctgagacagaggcccaccatcggactcttcacc cagtgctctgggcccgccagccttcggggcctcaacgtggcagaggtgcaaaagggcgag ttcagctgctcaggccagggggaggctgcgggagcacctgcctgcaccctctcgtccggt tcctgcccagccatgtgcagctgtagcagcggcatcgtggactgccgtggcaagggcctc actgccatccctgctaaccttccagagaccatgacagagatccgcctggagttgaacggt atcaaatccatcccacccggagccttctctccctacagaaagctgcgcaggatagacctg agcaacaaccagattgcagagattgcacccgacgccttccaaggcctgcgctccttgaat tccctggtcctctatggcaacaagattacagacctgccccgaggtgtatttggaggcctg tacacactccagctgctgcttctaaatgccaacaagatcaactgcatccggcctgatgcc ttccaggacctgcagaacctctctctgctctccctgtatgacaacaagatccagagtctc gccaagggcaccttcacctccctacgggccatccagacactgcatctggcccagaatcct ttcatctgtgactgtaacctcaagtggctggcagacttcttacgtaccaaccccatcgag acaactggggcccgatgtgccagcccccggcgcctcgccaacaagcgtattgggcagatc aaaagcaagaagtttcggtgctcagccaaagagcagtacttcattccagggacagaggac taccacctgaacagcgagtgtaccagcgacgtggcctgcccacacaagtgccgttgtgag gccagtgtggtggagtgctccagcctgaaactctctaagatccctgagcgaatcccccag tccacgactgagctacgactgaacaacaatgagatttctatcctagaggccactgggttg tttaagaagctctcacatctgaagaaaataaacctgagcaataacaaggtgtccgagatc gaagacgggacgtttgagggtgccgcctctgtcagtgagctgcacctgactgctaaccag ctggagtccattagaagtggcatgttccggggtctagatggcttgcggaccctgatgctg aggaacaaccgtatcagctgtatccacaacgacagcttcaccgggctgcgcaacgtgcgg ctcctgtctctctatgacaaccacatcaccaccatctcccctggagcctttgacactctc caggccctgtccacactaaacctcctggccaacccgttcaactgcaactgccatctgtca tggctgggcgactggctccggaagaggaagattgtgacggggaaccctcgctgtcagaac ccagacttcctgcggcagattcctctgcaggatgtggccttccctgacttcaggtgtgag gaaggccaggaggaggtgggctgcctgccccgcccacagtgcccccaggagtgtgcctgc ctggacacagtggtccgctgcagcaacaagcacctccaggctctgcccaagggcatcccc aagaatgtcacagaactctatttggatgggaaccagttcacactcgttccgggacagctg tctaccttcaagtatctgcagctcgtggacttgagcaacaacaagatcagttccttgagc aattcttccttcaccaacatgagccagctgaccacgctgatcctcagctacaatgccctc cagtgcatccctcctctggcctttcaaggacttcgttcgctgcgcctgctgtctttgcat ggcaatgatgtctccaccctccaagagggcatctttgcagacgtgacgtctctgtctcac ctggccattggtgccaaccccctgtactgcgactgccgcctccggtggctctccagttgg gtgaagactggctacaaggaacctggcattgcccgctgtgctggacccccagagatggag ggcaaactgttactcaccacacctgccaagaagtttgaatgccaaggtccccccagcctg gcagttcaggccaagtgtgatccctgcttgtccagcccatgccagaaccagggcacctgc cacaatgaccctcttgaggtatacaggtgtacctgccccagtggctacaagggccgacac tgtgaggtgtctctggacggctgttccagcaacccatgtggaaatggggggacctgccat gcccaggagggcgaggatgctggcttcacgtgctcctgtccctccggctttgaagggccg acctgtggagtggacacagatgactgtgttaagcatgcctgtgtcaacgggggtgtctgt gtagatggcgtggggaattacacatgtcagtgccccctgcagtacacaggaagggcctgt gagcagctggtggacttctgctccccggatatgaacccgtgtcagcatgaggcccaatgt gttggcaccccggatgggcccaggtgtgagtgcatgctaggttacacgggtgacaactgc agcgaaaatcaggatgactgcaaggaccacaagtgtcagaacggggcccagtgtgtggat gaagtcaacagctacgcctgcctctgtgttgagggctacagtggacagctctgtgagatc ccacctgcccccaggagctcctgtgaggggacggagtgccagaatggagccaactgcgta gaccagggaagccggcccgtatgccagtgcctaccaggctttggtggccctgaatgtgag aaattgctcagtgtcaactttgtggaccgggacacttatctgcagttcactgacctgcag aactggcctcgggccaacatcactcttcaggtctccacagcagaggacaatgggattctc ctatataatggggacaatgaccacattgcagttgagctgtaccagggccatgtccgtgtt agttatgacccaggcagctaccccagctctgctatctacagcgctgagacgatcaacgat gggcagttccacaccgttgagctggtcaccttcgaccagatggtgaacctctccatcgat ggcggcagccccatgaccatggacaactttggcaagcactacaccctcaacagcgaggcc cccctctatgtgggagggatgcctgtggacgtgaactcagctgccttccgcctgtggcag atcctcaatggtaccagcttccacggttgcatccggaacctgtacatcaacaatgaactg caggacttcaccaagacacagatgaagccaggcgtggtgccaggctgtgagccgtgccgc aaactctactgtctacatggcatttgccagcccaacgccaccccagggcctgtgtgccac tgtgaggctggctgggggggcctgcactgtgaccagccagtggatggcccctgccatggc cacaagtgtgtccatgggaaatgcgtgccgctcgacgctcttgcctacagctgccagtgc caggatgggtactcgggggctctgtgcaaccaggtcggggctgtggcagagccctgtggg ggcttgcagtgcctgcatggtcactgccaggcctctgccaccaaaggggcacactgtgtg tgcagcccaggcttttcaggcgagctgtgtgagcaagagtccgagtgccggggggaccct gtccgggactttcaccgggtccagaggggctatgccatctgccagaccacacgcccgctg tcgtgggtggaatgccggggcgcgtgcccgggccagggctgctgccagggcctgcggctg aagcggaggaagctcaccttcgagtgcagcgatgggacttcgtttgctgaggaggtggag aagcccaccaagtgtggctgtgcccagtgcgcataa

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