Mus musculus (house mouse): 30841
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Entry
30841 CDS
T01002
Symbol
Kdm2b, Cxxc2, Fbl10, Fbxl10, Jhdm1b, PCCX2
Name
(RefSeq) lysine (K)-specific demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
mmu
Mus musculus (house mouse)
Pathway
mmu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
30841 (Kdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mmu03000
]
30841 (Kdm2b)
04121 Ubiquitin system [BR:
mmu04121
]
30841 (Kdm2b)
03036 Chromosome and associated proteins [BR:
mmu03036
]
30841 (Kdm2b)
Enzymes [BR:
mmu01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
30841 (Kdm2b)
Transcription factors [BR:
mmu03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
30841 (Kdm2b)
Ubiquitin system [BR:
mmu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
30841 (Kdm2b)
Chromosome and associated proteins [BR:
mmu03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
30841 (Kdm2b)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
30841 (Kdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
JHD
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
30841
NCBI-ProteinID:
NP_001003953
MGI:
1354737
Ensembl:
ENSMUSG00000029475
UniProt:
Q6P1G2
LinkDB
All DBs
Position
5:complement(123008727..123127333)
Genome browser
AA seq
1309 aa
AA seq
DB search
MEAEKDSGRRLRAIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKD
FNYEYVQREALRVPLVFRDKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEM
SMSQFVRYYETPEAQRDKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQ
TEATNALAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNL
ALYEEWVLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILH
SFNVPMQLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTQEYQRELMLI
DAPRKTSVDGFSSDSWLDMEEESCEQQPQEEEEEEEDKEEEGDGADKTPKPPTDDPTSPT
STPPEDQDSTGKKPKAPAIRFLKRTLSNESEESVKSTSMPTDDPKTPTGSPATEVSTKWT
HLTEFELKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKNVLKEHVDDDPTLAITGV
PVVSWPKKTAKNRVVGRPKGKLGPASAVKLAANRTTAGARRRRTRCRKCEACLRTECGEC
HFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVEEEEGKFNLMLME
CSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQKRGPGFKYASNLPGSL
LKEQKMNRDNKEGQEPAKRRSECEEAPRRRSDEHPKKVPADGILRRKSDDVHLRRKRKYE
KPQELSGRKRASSLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYFQQQLKPGKEDKLFRK
KRRSWKNAEDRLSLANKPLRRFKQEPEDDLPEAPPKTRESDQSRSSSPTAGPSTEGAEGP
EEKKKVKMRRKRRLVNKELSKELSKELNHEIQKTESTLAHESQQPIKSEPESENDEPKRP
LSHCERPHRFSKGLNGTPRELRHSLGPGLRSPPRVMSRPPPSASPPKCIQMERHVIRPPP
ISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHRDLCVCMRVCRTWNRWCCDKRLWTRIDL
NRCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSAL
CSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITD
VSLRLIIRHMPLLSKLQLSYCNHINDQSINLLTAVGTTTRDSLTEVNLSDCNKVTDLCLS
FFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagagaaagactctggaagaagattgcgtgcgattgaccgccagagatacgac
gagaacgaagacttgtcggacgtggaggaaattgtcagcgtccgtggcttcagcctggag
gagaagctacgtagccagttataccagggggacttcgtgcatgctatggaaggcaaagat
tttaactatgagtacgtacagagagaagctctcagggtccccctggtttttcgggacaag
gatggactagggatcaagatgccagaccctgatttcacagtccgagacgtcaaactcctg
gtggggagccgccgtttggtggatgtcatggacgtcaacacccagaagggtaccgagatg
agcatgtcccagtttgtgcgctactacgagacaccagaggcacagcgggataaactgtac
aacgtcatcagcctcgagttcagccatacgaagctggagcatctggtcaagcgtcccact
gtggtggacctggtcgactgggtggacaacatgtggcctcagcatctaaaggaaaagcag
acagaagccaccaatgcccttgcagagatgaagtaccccaaagtgaaaaagtactgtctg
atgagcgtgaagggctgtttcactgacttccacattgactttggaggcacctccgtgtgg
taccatgtgttccgtggtggcaagatcttttggctgatccctccaaccctgcacaacttg
gctttgtacgaggagtgggtgctgtctggcaaacagagcgacatctttctgggagaccgc
gtggaacgctgccaaagaattgagctgaagcaaggctacacctttttcatcccttccggt
tggatccatgcggtttatacgcctgtggactctctggtgttcggcgggaacatcctgcat
agcttcaacgtgcccatgcagctgcggatctacgagatcgaggacaggacccgggttcag
cccaagttccgttaccccttctactatgagatgtgctggtatgtcttggagagatatgtg
tactgtgtgacccagcgctcctacctcactcaggaataccagagagaattaatgcttatt
gatgccccaagaaaaaccagtgtagacggcttttcatccgactcctggctggacatggag
gaggagtcctgcgagcagcagccacaggaggaagaggaggaggaggaggacaaggaggag
gaaggagatggtgcagataaaacacccaagccacccaccgatgaccccacctcacccacc
agcaccccgcccgaagaccaggacagcacagggaagaagcctaaagcccctgccatacgg
ttcctcaagaggacgttgtccaatgagtcagaggaaagtgtcaagtcgacctcgatgccc
acggacgatcccaagacgcccacgggctccccggccaccgaggtttctaccaagtggact
caccttaccgaatttgaactgaagggcttgaaagccctggttgaaaagctagagtccctt
ccggagaataagaagtgtgtccctgagggaatcgaggacccccaggccctcctggaaggt
gtaaagaatgtactgaaagagcacgtggatgacgaccccaccctggccatcaccggggtc
cctgtggtcagctggccaaagaaaactgcaaagaaccgggtggtgggtcggcctaagggc
aagttgggcccggcctcagcggtgaagttggctgccaaccgaacaacagcaggagctcgc
aggcgccggacgcgatgccgcaagtgcgaggcctgcctgcggacggagtgtggagagtgc
cacttttgcaaggacatgaagaagtttggaggtcctgggcgcatgaagcagagctgcatc
atgcggcagtgcatcgcgccagtgctgccccacaccgccgtgtgccttgtgtgtggcgag
gcagggaaggaggacacagtggaagaggaagaaggcaagtttaacctcatgctcatggaa
tgctccatctgcaacgagatcatccaccctggatgccttaagattaaggaatcggagggt
gtggtcaacgatgagcttcccaactgctgggagtgtccgaagtgtaaccatgccggcaag
accgggaaacaaaagcgtggccctggctttaagtatgcctccaacctgcctggctccttg
ctcaaggagcagaagatgaaccgggacaacaaggaagggcaagagcctgccaagcggaga
agtgagtgtgaagaggctccccgtcggaggtcagacgagcaccccaaaaaggtgcctgca
gatggcatcctccgccgaaagtctgatgatgtgcacctgaggaggaagcggaaatacgag
aagccccaagagctgagtggacgcaagcgagcctcgtcgcttcaaacgtcccccggttcc
tcctctcacctctcgccgaggccccctctaggcagcagtctcagcccttggtggagatcc
agtctcacttacttccagcagcagctaaaacctggcaaagaagataagcttttcaggaaa
aagcggcggtcctggaagaacgctgaggatcgtctgtcactggccaacaagccccttcgg
cgctttaagcaggaaccggaggacgatctgcctgaggcacctcctaagacccgggagagt
gatcagtcacgttccagctcacccactgctggtcccagcactgagggagctgaaggccca
gaagagaagaaaaaggtgaagatgcgccggaagcggcgacttgttaacaaggagctgagc
aaagagctaagcaaggagctcaaccatgagatccaaaagacggagagcaccctggctcac
gagagccagcagcccatcaagtcagagcctgagagcgagaacgacgagcccaagaggccc
ttaagccactgcgagcgcccccaccgcttcagcaaagggctcaacggcacacctcgggag
ctgcggcactcgctgggacctggcctgcgtagtccacctcgtgttatgtcccggcccccg
ccctctgcatccccacccaagtgcatccagatggagcgtcacgtgatccggccaccgccc
atcagccccccacctgactcgctgcccctggatgatggagcagcccacgtcatgcatagg
gaggtgtggatggcagtcttcagctacctcagccaccgagacctgtgtgtctgcatgcgg
gtctgcaggacctggaaccgctggtgctgcgataagcggttgtggacccgcatcgacctg
aaccgctgcaagtccatcacacccctgatgctgagcggtatcatccggcgacagcctgtc
tcccttgacctcagttggaccaacatctccaagaagcagctgagttggctcatcaaccgg
ttgcctgggctccgagacttggtgctgtcaggctgctcatggatcgctgtctcagccctc
tgtagctccagttgtccattgctccggaccctggatgtccagtgggtagaaggactaaag
gatgcccagatgagggatctcctgtctccacccacagacaacaggccaggtcagatggac
aatcggagcaagctccggaacattgtagagctgcgcctagctggcctggacatcacagat
gtctccctgcggctcattattcgccatatgcccctgctctcgaagctccaactcagttac
tgtaaccacatcaatgaccagtccatcaacctgctcactgccgtcggcaccaccacccga
gactcgctgacagaggtcaacctatcagactgtaataaggtaactgacctgtgcctgtcc
ttcttcaaacgctgtggaaatatctgtcatattgacctgaggtactgcaagcaagtcacc
aaggaaggctgtgagcaattcatagctgaaatgtctgtgagtgtccaatttgggcaagtg
gaagagaaactcctgcaaaaactaagttag
DBGET
integrated database retrieval system
