KEGG   Mus musculus (house mouse): 76479
Entry
76479             CDS       T01002                                 
Symbol
Smndc1
Name
(RefSeq) survival motor neuron domain containing 1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
mmu  Mus musculus (house mouse)
Pathway
mmu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mmu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    76479 (Smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mmu03041]
    76479 (Smndc1)
Spliceosome [BR:mmu03041]
 Complex A
  U2 snRNP components
   U2 related factors
    76479 (Smndc1)
 Complex B
    76479 (Smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    76479 (Smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR
Other DBs
NCBI-GeneID: 76479
NCBI-ProteinID: NP_766017
MGI: 1923729
Ensembl: ENSMUSG00000025024
UniProt: Q8BGT7
LinkDB
Position
19:complement(53367603..53379065)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASTQPTHSWKVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAVYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaaacagttggctagctacaaagctcaactccagcaagtagaa
gctgccctttctggaaatggagaaaatgaagatctattgaaactgaagaaggatttgcaa
gaagtaatagaactgaccaaagaccttctgtcaactcagccttcggagacgctcgcaagc
tcagacagttttgcttctactcagcccactcattcatggaaagtaggggacaagtgcatg
gccgtgtggagtgaagacggacagtgttacgaagcggagattgaagagatagatgaagaa
aatggcaccgctgcaatcacctttgctgtttatggcaatgccgaagtgacgccattgctg
aacctcaagcctgtagaagaaggaaggaaggcgaaagaggacagcggcaacaaacccatg
tcaaaaaaagaaatgatcgcccagcagcgtgaatataaaaagaaaaaagctttgaaaaaa
gcacagagaataaaagagttggagcaggagcgagaggaccagaaggtgaaatggcagcag
ttcaacaacagggcgtactccaagaacaagaaaggccaggtaaagaggagtatttttgct
tctccagaaagtgtaacgggcaaagttggagtaggaacttgtggaattgctgacaagccc
atgacacagtatcaagatacatccaagtacaatgtcaggcatttgatgcctcagtaa

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