Microcebus murinus (gray mouse lemur): 105864272
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Entry
105864272 CDS
T07238
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105864272 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mmur03400
]
105864272 (LIG4)
Enzymes [BR:
mmur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
105864272 (LIG4)
DNA repair and recombination proteins [BR:
mmur03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
105864272 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
CCDC28
Nro1_C
Motif
Other DBs
NCBI-GeneID:
105864272
NCBI-ProteinID:
XP_012607494
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All DBs
Position
13:6430533..6438171
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AA seq
911 aa
AA seq
DB search
MAASQTSQTVASHVPFADLCSTLERIQKSKGRPEKIRHFREFLDSWRKFHDALHKNQKDV
TDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTGTRG
DAGDFAMIAYFVLRPRCLKKGSLTIQQVNDLLDSVASNNSAKRKDLIKKSLLQLITQSSA
LEQKWLIRMIIKDLKLGVSQQTILSVFHNDAVELHGVTTDLEKVCRQLHDPSVGLSDISI
TLFSAFKPMLAAIADIERIEKDMKHQSFYIETKLDGERMQMHKDGTDYKYFSRNGYNYTD
QFGASPDEGSLSPFIHNAFKTDIEVCILDGEMMAYNPNTQTFMQKGIKFDIKRMVEDSDL
QTCYCVFDVLMVNNKKLGHETLKKRYEILSSIFTPIPGRIEIVQKIQAHTKNEVIDALNE
AIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVSELMDELDILIVGGYWGKGSRGGMM
SHFLCAVAEKPPPGEKPSVFHTLSRVGSGYTMKELYDLGLKLARHWKPFHKKTPPCSILC
GTERPEVYIEPCNSVIVQVKAAEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLE
QLRGKASGKLASKHFHVGIDEEPQEKKRKAAPKMKKVIGIIEHLKAPNLSNINKVSNIFE
DVEFCVMSGTVIHPKTDLENRIAEFGGYIVQNPGPDTYCVIAGSENIRVRNIISSDEHDV
VKPEWLLECFKAKSCVPWQPRFMIHMCPSTKKHFAQEYDCYGDSYFVDTDLNQLKEVFSG
IKDFKEQTPEEMSSVIADLEYRYSWDHSPLSMFRRHTIYLDLYTVINDLSTKTEGTRLAI
KALELQFHGAKVVSRLAEGVSHVIIGDDRSRVANFKAFRRNFKRKFKILKEDWVTDSIDK
CELQEENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacttcacaaactgttgcatctcacgttccttttgcagatttatgt
tcaactttagaacgaatacagaaaagtaaaggacgtccagaaaaaatcagacacttcagg
gaatttttagattcttggagaaaatttcatgatgcccttcataagaaccaaaaagatgtc
acagattctttttatccagcaatgagactaattcttcctcagctagaaagagagagaatg
gcctatggaatcaaagaaactatgcttgctaagctttatattgaattgcttaatttacct
agagaaggaaaagatgcccttaaacttttaaattacagaacacccactggaactcgtgga
gatgctggagactttgcaatgattgcatactttgtgttgaggccaaggtgtttgaagaaa
ggaagtttaactatacagcaagtaaatgaccttttagactctgttgccagcaataattct
gctaaaagaaaagacctaataaagaagagtcttcttcaacttataactcagagttcagca
cttgaacaaaagtggcttatacggatgatcataaaggatttaaagcttggtgttagtcag
caaactatactttctgtttttcataacgatgctgttgagttgcatggtgtcaccacagat
ctggaaaaagtctgtaggcaacttcatgatccttccgtaggacttagtgatatttctatc
actttattttcagcctttaaaccaatgctagctgctatagcagatattgagcgcattgag
aaggacatgaaacaccagagtttctacatagaaaccaagctagatggtgagcgtatgcaa
atgcacaaagatgggactgactataaatacttctccagaaatggatataattatactgat
cagtttggtgcttctccggatgaaggttctctttccccattcattcataatgcattcaaa
acagatatagaagtctgtattcttgatggtgaaatgatggcctacaaccctaatacgcaa
acttttatgcaaaaggggattaagtttgatattaaaagaatggtagaagattctgatctg
caaacatgttattgtgtttttgatgtattgatggttaataataaaaagctaggacatgag
accctgaaaaagaggtatgagattcttagtagtatttttacaccaataccaggtagaata
gaaatagtacagaaaatacaagctcatactaagaatgaagtaattgatgcattgaatgaa
gcaatcgataaaagagaagagggtatcatgataaaacatcctctatccatttacaagcca
gacaaaagaggtgaaggatggttaaaaattaaaccagagtatgtcagtgaactaatggat
gaattggacatcttaattgttggaggctattggggaaaaggttcacggggtgggatgatg
tctcattttttgtgtgcagtagcagagaagccccctcctggtgaaaagccatctgtgttt
catactctctctcgtgttggctctggctacaccatgaaagaactctatgatctaggtttg
aaattggccagacattggaagccttttcataaaaaaactccgccatgtagcattttatgt
ggaacagaaaggccagaagtatacatcgaaccttgtaactctgtcatcgttcaggttaag
gcagcagagatcgtccctagtgacatgtataaaactggctgcacattgcgttttccacga
attgaaaagataagagatgacaaggagtggcatgaatgcatgactctggatgacttagag
caacttagggggaaagcatctggaaagcttgcatctaaacactttcatgtaggtatagat
gaagagccacaggaaaaaaagcggaaagctgctccaaagatgaagaaagttattggaatt
atcgaacacttaaaagcacctaatctttctaatataaacaaagtttctaatatatttgaa
gatgttgagttttgtgttatgagtggaacagtcattcatccaaagactgacctggagaat
agaatcgcagaatttgggggttatatagtacaaaatccaggcccagacacgtactgtgta
attgcaggctctgagaacatcagggtgagaaacataatttcttcagatgaacatgatgtt
gtcaagcctgagtggcttttagagtgttttaaggccaaaagctgtgtgccatggcagcct
cgctttatgattcatatgtgtccatcaacaaaaaaacattttgcccaagaatatgattgc
tatggtgatagttattttgttgatacagatttgaaccaactgaaggaagtattctcagga
ataaaagattttaaggaacagactcccgaagaaatgtcttctgtgattgctgatttagaa
tatcggtattcctgggaccactctcccctcagtatgtttcgacgccacaccatttatttg
gacttgtatactgttattaatgatttgagtaccaaaactgagggaacaagattagctatt
aaagccttggagcttcaatttcatggagcaaaagtagtttctcgtttagctgaaggagtg
tctcatgttatcattggggatgatcgtagtcgagttgcaaattttaaagcttttagaaga
aattttaagagaaagtttaaaattctaaaagaagattgggtaactgattcaatagacaaa
tgtgaattacaggaggaaaatcaatatttgatttaa
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