Microcebus murinus (gray mouse lemur): 105883573
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Entry
105883573 CDS
T07238
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mmur
Microcebus murinus (gray mouse lemur)
Pathway
mmur03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mmur00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105883573 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mmur03041
]
105883573 (EFTUD2)
Spliceosome [BR:
mmur03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
105883573 (EFTUD2)
Complex C
U5 SnRNP specific factors
105883573 (EFTUD2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
105883573
NCBI-ProteinID:
XP_012642228
Ensembl:
ENSMICG00000016592
UniProt:
A0A8C5W3F0
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All DBs
Position
16:complement(33017364..33066333)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDIGDHDDDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgatgagtttggaaattatattggaccagaactcgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggacgatgatgat
gatgatgatgacataggtgatcatgacgatgatcaccctgggatggaagtggtgctgcat
gaggacaagaagtactacccaacagccgaggaggtgtacggtcctgaggtggagaccata
gttcaggaagaagacacgcagcctctcacagaacccattattaagccagtgaaaacgaag
aaattcactctgatggagcagacattacctgtcacagtatatgaaatggatttcttggcg
gatctgatggataactcagaactcatcagaaatgttaccctttgtggccatctccaccat
ggcaagacatgttttgtagactgtttaatcgagcagactcacccagaaatcagaaagcgt
tatgaccaagatctgtgctatactgacatcctcttcacagagcaagagagaggtgttggc
atcaaaagcactcccgtgacggtagtcttaccagataccaaaggaaaatcttacctattc
aatatcatggacaccccaggacatgtgaatttttctgatgaggtcacagctggcttgcgc
atctcagacggagtggtccttttcattgatgctgctgagggggtgatgctgaacacagag
cggctgatcaagcatgcggtgcaggagaggctggcggttactgtgtgcatcaacaaaatt
gaccggctgatcctggagctgaagctgcctccgactgatgcttattacaagctgcgccac
attgtggatgaggtcaatggattaataagcatgtattccaccgatgagaacctgatcctt
tccccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactg
ggctcctttgccaagatctacgctgacaccttcggtgacattaattaccaggaatttgct
aaaagactctggggtgacatctacttcaaccctaagacgcgaaagttcacaaaaaaggct
ccaaccagcagctctcagaggagctttgtggagtttatcttggaaccactttataagatc
cttgctcaggttgtgggtgatgtggacaccagcctcccaaggaccctggacgagcttggc
atccacctgactaaggaggagctgaagttgaacatccgccccctgctcaggctggtctgc
aaaaagttctttggcgagttcacaggctttgtggatatgtgtgtacagcatattccttct
ccaaaggtgggcgccaagcccaagattgagcacacctacactggtggagtagactctgac
cttggcgaggccatgagcgactgtgaccctgatggtcccctgatgtgccacactactaag
atgtacagcacagatgatggagttcaatttcatgcctttggccgggtgttgagtggcacc
atccatgctgggcagcctgtgaaggtgctaggggagaactataccctggaggacgaggaa
gactcccagatatgcaccgtgggccgcctttggatctctgtggccaggtaccacattgag
gtgaaccgtgttcctgctggcaactgggttctgattgaaggtgttgatcaaccaattgtg
aagacagcgaccataactgaacctcgaggcaatgaggaggctcagattttccggcccttg
aagttcaatactacgtctgttatcaagattgctgtggagccagtcaatccctcagagctg
cccaagatgctcgatggtctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaagagtctggcgagcatgtgatcctgggtaccggagagctttacctggactgtgtg
atgcacgatttgcggaagatgtactcagagatagacatcaaggtggctgacccagttgtc
acgttttgtgagacggtggtggaaacatcctctctcaagtgctttgctgaaacacccaat
aagaagaacaagatcaccatgattgctgagcctcttgagaagggcctcgccgaggacata
gagaatgaggtggtccagatcacgtggaacaggaagaagctgggagagttcttccagacc
aagtacgactgggatctgctggctgcccgttccatttgggcttttggcccagatgccact
ggccccaacatcctggtggatgatactctgccctctgaggtggataaggcccttctcggc
tcagtgaaagacagcatcgttcaaggtttccagtggggaaccagggagggacccctctgt
gatgagctgattcggaacgtcaagtttaagatcctggatgcagtggttgcccaggagccc
ctgcaccggggcgggggccagatcatccccacggccaggagagttgtctactctgccttc
cttatggccactcctcgtctcatggagccttactactttgtggaggtccaggcccctgca
gattgtgtctctgcagtttatactgtcctggccaggcgcagggggcatgtgactcaggac
gcacccattccaggctcccctctgtataccatcaaagctttcatcccagccatcgactct
tttggctttgagactgatctccggactcatacccagggacaagccttttccttgtctgtc
ttccaccattggcagattgtacctggtgatcctctggacaagagcattgtcattcgcccc
ttggagccacagcccgctcctcacctggcccgggaattcatgatcaaaactcgtcgtaga
aagggcctcagtgaagacgtgagcatcagcaagttctttgacgatcctatgttgctggag
ctcgccaaacaggacgttgtgctcaattaccccatgtga
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