Myotis myotis (greater mouse-eared bat): 118663605
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Entry
118663605 CDS
T07220
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mmyo
Myotis myotis (greater mouse-eared bat)
Brite
KEGG Orthology (KO) [BR:
mmyo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mmyo03036
]
118663605 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
mmyo03400
]
118663605 (SMCHD1)
Chromosome and associated proteins [BR:
mmyo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118663605 (SMCHD1)
DNA repair and recombination proteins [BR:
mmyo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
118663605 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCHD1_S5
Ig_SMCHD1_5th
Ig_SMCHD1_1st
Ig_SMCHD1_8th
Ig_SMCHD1_2nd
Ig_SMCHD1_7th
Ig_SMCHD1_6th
Ig_SMCHD1_4th
SMC_hinge
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
118663605
NCBI-ProteinID:
XP_036179294
LinkDB
All DBs
Position
Unknown
AA seq
2003 aa
AA seq
DB search
MAAAGGGGPSAGTGRGGRGDRCRKVYLFDRRKKESEQGDRVVQVGERSDYAGFRALVRQT
LGISPEEKFVITTTSRKEITSDNFDETVKDGVTLYLLQSVDQLLLTATKERIEFLPHYDT
LVKSGMYEYYASEGQNPLPFALAELIDNSLSATSRNTGIRKIQIKLHFDETQGKPAVAVI
DNGRGMTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGGKQAV
FFVGQSARMISKPADSQDVHELLLSKEDFEKKEKNKESIYSGFIRNRKPCDSVHITNDDE
RFLHCLISEEKEKVSFTAVVITGVQSEHIPYLKNYFHLWTRQLAHIYHYYIHGPKGNEKR
TSKEVGPFNNIDIEISMFEKGKAPKIVNLREIQDDMQTLYINTATDSFEFKAHVEGDGVV
EGIIRYHPFLYDRETYPDDPCFPSKLKDEDDDDDCYIIEKAARGKRPIFECFWNGRLIPY
TSVEDFDWCAPPKKRGLVPIECYNRISGALFTNDRFQVSTNKLTFMDLELKLKDKNTLFT
RISNGQEQRVKIDREFSFWLKDCHEKYDKQIKFTLFKGIITRSDLPSKKQGPWATYSAIE
WDGKIYKAGQMVKTIKTLPLFYGSIEKFFLYGNHDGEVYATGGEVQIAMEPRALYDETKI
VPIAKLDRTFAEKAVKKYVEDEMARLPDRLSVTWPEGDELFPNEIRPAGTTIGALRIEIL
NKKGEAMQKLPGTGHGGSKKLLVELKVILHTSSGNKEIISHISQHGGKWPYWFKKMENIQ
KLGNYTLKLQVVLNESNADTYAGRPLPCKAIKFSVKEGKPEKFSFGLLDPPFRVGVPFNI
PLEFQDEFGHASQLINDIQPVLEASGLSLQYEEITKGPNCIIRGVTAKGSVNSCQGKNFN
LKVILPGFKEDSQILKIRLLPGPPHQLKVKPDSEFLVIENGTAFPFQVEVLDESDNITTQ
PKLVVHCKFLGAPNLPVYTVDCSSSGTSILSGPAIQVQNIKKDQTLKAKIEIPSCKDVAP
VEKTIKLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDVMHNLIFQMYDEGEREIHV
TSTLAEKIKVNWTPEINKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFTVRP
LPDEPKHLKCELKGAKTVQMGQELQGEIVVIVTDQYGNQIQAFSPSSLSALGIAGIGLDS
SQLKTTFQENTQSISVRGIKFIPGPPGNKDLCFTWREFSDFIRVQLISGPPAKLLLIDWP
ELKEFVPVINGKELQHPLIVQLCDQWDNPAPVPLVKINIIKANNLKLTPSNQQYKTDERG
RANLGLFSVYAPRGKHTMQVKAIHNRNTIEGPIIKLMILPDPEKPIRLNVKYDKDTLFLA
GGTFTDFMITVISEDDSIIKNINPARITMKMWKHSNNGNRPPANAETFSCNKIKGNDKED
GCFYFRDKAIPHKVGTYCIQFGFMMDKALILNSEQIIIDVQPNQPMKLVPKIQPATPAVS
NVHSVANRTLVKDLHLIITDDFNNQTGLDLVGTVIATIKGSNEEDTDTPLFIGKVRTLEF
PFVKGSANITSLVLAENSPGKDSTEYFIKFELQLPDLSRTLESYSLPFMFSNDVKKQQQM
LAFAKQKDELSQSIEMYRTVFETSKQLIDEMKCQVEVAKSKEAQLRNELKTNNIDIPTTQ
QVPHIEALLKRKILEQEELKKKPRRSCTLPNYTKSSGNILGKIAHLAQIEDDRAAMVISW
HLASDMDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKNLPDWRRPLPHYRNGKLYFRP
VGDPVFARDLLTFPDNIEHCETVFGMLLGDTIILDNLDAANHYRREVVKITHCPTLLTRD
GDRIRSNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLVLGQQIDLLQQYRNALDKLNSLT
KELNSELEYLQSPEMKKKKQELDEREKTLKLMEQHLLGVTPTRKGSDSLGHPTKVEMTDC
PNPPKRMRREVTRQNRTVTKTNV
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggcgggcggcggcgggccctcggcggggactggaaggggcggccgaggcgac
cgctgcaggaaggtgtacttgttcgaccggcgcaagaaggagtcggagcagggcgaccgg
gtggtgcaggtcggggagcgctcggactacgcgggattccgcgccttggtgcgccagaca
cttggcatttcacctgaggaaaaatttgttattacaacaacaagtaggaaagaaattacc
agtgataattttgatgaaactgttaaagatggagttactctatatctgctacagtcagtc
gaccagttactactaacggctacgaaagaaagaattgaattcctacctcactatgacacg
ctggttaaaagtggcatgtatgagtattatgcaagtgaaggacaaaatcctttgccattt
gctcttgcagaattaattgacaattcattgtctgctacttctcgtaacactgggattaga
aaaatacagatcaaattgcattttgatgaaacacaaggaaaacctgctgttgcagtgata
gataatggaagaggaatgacctctaaacagcttaataactgggctgtctataggctgtcc
aagtttacaaggcaaggagattttgaaagtgatcattcaggatatgttcgaccagtacca
gtgccacgcagtttaaatagtgatatttcctattttggtgttgggggcaagcaggctgtt
ttcttcgttggacaatcagccagaatgataagcaaacctgcagactcccaagatgttcat
gagcttttgctttctaaagaagattttgagaagaaggagaaaaataaagagtcaatatat
agtggatttattagaaacagaaagccatgtgactctgttcacattacaaatgatgatgaa
agatttctacattgccttatctcagaagagaaggaaaaagttagctttactgctgtggtt
atcacaggagtacaatcagaacacataccatacttgaaaaattatttccatctttggaca
agacagttggcgcatatttatcattactatattcatggcccaaaaggaaatgaaaaacgt
acatcaaaagaagttggacctttcaacaacattgatattgaaatttctatgtttgaaaaa
gggaaggcacctaagattgtcaacctaagggaaatacaagatgacatgcagacgttgtat
ataaacacagcaactgatagttttgagttcaaagctcacgttgaaggagacggtgtagtg
gaagggattatccgatatcatcctttcttatatgatagagaaacttaccctgatgatcca
tgctttccatcaaaattaaaagatgaagatgatgatgatgattgttatataattgagaaa
gctgcaagaggaaaaaggcctatatttgaatgtttttggaatggacgactaataccatat
acatctgttgaagactttgactggtgtgctcctcctaagaagagagggcttgtaccaatc
gagtgctacaatagaatatctggtgcattattcactaatgacagattccaggtcagcaca
aataaactgacttttatggatcttgagctaaaattgaaagataagaacaccctttttaca
aggatttcaaatggacaggagcaacgagtgaaaattgacagagaattttctttctggctc
aaagactgtcatgaaaagtatgacaaacaaataaaatttacactttttaaaggaataatt
acacgttctgatcttccttctaaaaagcagggcccctgggccacatactcagcaatagaa
tgggatggaaaaatatacaaagcaggacagatggtgaagacaatcaagacacttcctctt
ttttatggaagcatagaaaaattttttctttatggtaatcatgatggagaagtatatgct
actggaggagaggttcaaattgcaatggaaccacgagcactgtatgatgaaacaaaaatt
gtgccaattgcaaaactggataggacctttgctgagaaagctgtaaaaaaatatgtagaa
gatgaaatggcaaggcttcctgatagattgtcagtaacttggcctgaaggagatgaatta
tttccaaatgaaattaggcctgctggaactaccattggtgcattaaggattgaaatactg
aataaaaaaggagaagcgatgcaaaagcttccaggaacaggtcatggagggtcaaagaaa
ctactggttgagctcaaagttatattgcacacttcaagtggaaataaagaaatcatttca
catattagtcaacatggaggaaaatggccttactggtttaaaaaaatggaaaatattcaa
aaattggggaattatacactaaaattacaagttgtattgaatgaaagtaatgcagacact
tatgctggaagaccactaccatgtaaagcaattaaattttctgttaaagagggcaagcca
gaaaaattttcatttggtcttctggatcctccttttcgtgttggagtcccattcaatatc
cctctggagtttcaggatgaatttggtcatgctagtcaactaataaatgatattcagcca
gttcttgaagcaagtggtttatctttacaatatgaagaaataaccaagggaccgaattgt
ataattcgaggtgttacagctaagggctctgtaaattcttgtcaaggcaagaattttaat
ctgaaggttattcttccgggttttaaagaagactcacagattttgaaaattagattacta
ccaggtccccctcatcaattgaaagtgaaacctgattctgaatttttagttatagaaaat
ggaacagctttcccatttcaggtagaagttttggatgaatcagacaatataacaacacaa
ccaaaactggttgttcattgtaagtttttaggtgctcctaatcttccagtctacactgtg
gattgcagtagttctggaaccagtattttatcaggacctgcaattcaagttcagaatatt
aagaaagaccagacgcttaaggctaaaattgaaatacctagttgtaaagatgtggcacct
gtggagaaaacgattaagttgcttcccagtagccatgttgcaagattacagatattcagt
gtggaaggacaaaaggcaatccagatcaaacaccaagatgaggttaattggatagcaggc
gatgttatgcataatcttatctttcaaatgtatgatgaaggagaaagagaaatccatgta
acatcaactttagcggagaaaattaaagttaattggactcctgagattaacaaagaacac
ttgctgcaaggtctgcttcctgatgtacaagtaccaacatctgtaaaagatatgcgctat
tgccaggtttcatttcaggatgatcatgtgtctttggaaagtgcatttacagtaagaccc
ctacctgatgaacctaaacatctaaagtgtgagttgaaaggagcaaaaacagtacagatg
ggccaagagcttcaaggggaaatagttgtaatagttacagatcagtatggaaatcagatt
caagcattttcaccaagttctttatctgccttgggaattgctggtattggacttgatagc
tcacagttgaaaactacctttcaggaaaatacacagagtataagtgtaagaggcatcaaa
tttattccaggtcctcctggaaataaggatctttgttttacttggcgtgagttttctgac
tttattcgagtacagctaatttctggaccaccagctaaacttctccttatagactggcca
gaattaaaggagtttgttccagtaattaatggaaaagaattacagcatcctctcattgtt
caactttgtgatcagtgggataatccagcacctgtaccactggttaaaataaatatcata
aaagctaacaatttaaagctcacgccttcaaaccaacagtataaaacagatgaaaggggc
agggctaatttgggattgttcagtgtttatgcccctagaggaaaacatactatgcaggtg
aaagccatccataacaggaataccatagaaggacctataattaagttaatgattcttcca
gaccctgaaaaacccattcgtctcaatgttaaatatgacaaagatactttatttttagca
gggggtactttcactgattttatgattactgttatttctgaagatgatagcatcattaaa
aatattaatccagcacgtattaccatgaaaatgtggaagcactctaacaatgggaaccga
ccaccagcaaatgcagaaacatttagttgtaataaaataaaaggtaatgacaaggaagat
ggctgcttctacttcagggataaagcaattcctcataaagtgggaacatattgtatccag
tttggttttatgatggataaagcacttattcttaacagtgaacagattataattgatgtt
caacctaatcaacctatgaagttagtacctaaaattcagccagccacaccagctgtttca
aatgttcactcagttgccaataggaccctggtcaaagatttacatcttattatcacggat
gacttcaacaatcagactggacttgatttggttggcactgttatagctaccatcaaaggt
tctaatgaggaagatactgatacaccactctttatcgggaaagttagaacacttgaattc
ccttttgtaaaaggttccgctaacatcacgagtctagtgctggcagaaaatagtcctgga
aaggatagtactgaatattttattaaatttgagcttcagctaccagatttatcaagaaca
ttagaatcatatagtctaccatttatgttttctaatgatgttaagaagcagcaacaaatg
ctagcatttgcaaaacaaaaggatgaattatctcaatctattgaaatgtatagaactgta
tttgaaaccagcaaacagcttattgatgaaatgaagtgccaagttgaagtagcaaaatca
aaagaggcccagttgcgaaatgaactaaaaacaaataatattgacattcctacaacacaa
caggtgccacacattgaagcacttttaaaaagaaagatactagaacaagaagaactaaag
aaaaaaccaagaagatcatgtactcttccaaactatactaaaagcagtggaaatattttg
ggaaagattgcacacttggcacaaattgaagatgatagagctgcaatggttatttcttgg
catctggcaagtgatatggattgtgttgtaaccttgaccactgatgctgcacgtcgtatc
tatgatgaaacccaaggtcgtcagcaagtgttaccacttgattctatttataagaagaat
cttccagattggagaagacctctgcctcattatcgaaatggaaaattatattttagaccc
gttggagatccagtctttgcccgagatttgttaacatttcctgataacatagaacattgt
gaaacagtatttggtatgctattaggagacaccattattttggataatttggatgctgcc
aatcattatagaagagaggttgttaaaatcacacactgtcctacactgctcacaagagat
ggagatcgcattcgaagtaatggaaagtttgggggccttcagaataaagctcctccaatg
gacaaacttcggggaatggtatttggagctccagtaccaaagcagtgcctggtcttaggg
caacaaatagatcttcttcaacagtatcgtaatgctctggacaagttgaacagtttgacc
aaggaacttaacagtgaattagagtacctgcagtctcctgaaatgaaaaagaaaaaacaa
gaacttgatgaacgagagaaaactctgaaactaatggagcaacaccttctaggtgtgact
cccacacgtaagggcagtgattcattaggtcatccaacaaaggttgaaatgacagattgt
ccaaatcctcctaaaagaatgagaagagaagttacaagacaaaataggactgtaaccaaa
acaaatgtgtga
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integrated database retrieval system
