Miniopterus natalensis (Natal long-fingered bat): 107529559
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Entry
107529559 CDS
T05883
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Pathway
mna03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107529559 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mna03000
]
107529559 (KDM2B)
04121 Ubiquitin system [BR:
mna04121
]
107529559 (KDM2B)
03036 Chromosome and associated proteins [BR:
mna03036
]
107529559 (KDM2B)
Enzymes [BR:
mna01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
107529559 (KDM2B)
Transcription factors [BR:
mna03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107529559 (KDM2B)
Ubiquitin system [BR:
mna04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107529559 (KDM2B)
Chromosome and associated proteins [BR:
mna03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107529559 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107529559 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
JHD
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
107529559
NCBI-ProteinID:
XP_016058508
LinkDB
All DBs
Position
Unknown
AA seq
1360 aa
AA seq
DB search
MSDFWPPGLWDSECLVFSATQFVAARETDPSVLESRAQSAPPPFLHHLFFWQPRAVGGGG
WGLQPFHFSFPASPRPIDRQRYDENEDVSDVEEIVSARGFSLEEKLRSQLYQGDFVLAXP
GWAEPGSFLPLTNRSWFVCAFMTSPACFNSNIQTDFNYEYVQREALRVPLIFREKDGLGI
KMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGAEMSMSQFVRYYETPEAQRDKLYNVISL
EFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQMEATNAIAEMKYPKVKKYCLMSVKG
CFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEWVLSGKQSDIFLGDRVERCQ
RIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPMQLRIYEIEDRTRVQPKFRY
PFYYEMCWYVLERYAYCVTQRSYLTQEYKRESMLIDAPRKPSVDGFSSDSWLEMEEESCE
QQPQEEEEEGADKGPKPPADGPASPTSTPSEDQEPPGKKPKAPALRFLKRTLSNESEESV
KSTTTPVDYPKTPTGSPTTEASAKWTHLTEFELKGLKALVEKLESLPENKKCVPEGIEDP
QALLEGVKNVLKEHADDDPSLAITGVPVVTWPKKTPKNRAIGRPKGKLGPASAVKLAANR
TTAGARRRRTRCRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAV
CLVCGEAGKEDTVEEEEGKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPK
CNHAGKTGKQKRGPGFKYASNLPGSLLKEQKMNRDNKDGQESAKRRSECEEAPRRRSDEH
PKKVPPESILRRKSDDVHLRRKRKYEKPQEPSGRKRLKPGKEDKLFRKKXPLRRSWKNAE
DRMALANKPLRRFKQEPEDDLPEAPPKSRESDHSRSSSPTAGPSTEGAEGPDEKKRVKVR
RKRRLPNKELSKELSKELNQEIQKTESSLASENHQPIKSEPESENEEPKRPPGLCERPHR
FSKGLNGTTRELRHQLGPGLRSPPRVISRPPPSVSPPKCIQMERHVIRPPPISPPPDSLP
LDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTWNRWCCDKRLWTRIDLNHCKSITPL
MLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRDLVLSGCSWIAVSALCSSSCPLLR
TLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKLRNIVELRLAGLDITDASLRLIIRH
MPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTEINLSDCNKVTDQCLSFFKRCGNIC
HIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLLQKLS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacttctggcctccaggactgtgggacagtgaatgtctggtgttctcagccacc
cagtttgtggcagcccgggagactgacccgagtgtcctggagagtcgagcccagagcgcg
cccccccctttcctccaccacctcttcttctggcagccaagggcggtcggcgggggcggc
tggggtcttcagccctttcatttcagctttccagcttccccgcgcccgatcgaccgccag
aggtacgacgagaacgaagacgtgtcggacgtggaggagatcgtgagcgcccgcggcttc
agcctggaggagaagctgcgcagccagctgtaccagggcgacttcgtgctcgccncccca
ggatgggcagagccagggagttttcttcccctaaccaaccgatcgtggttcgtttgcgcc
ttcatgacttcaccggcttgttttaattccaatatccaaacagatttcaactatgagtac
gtgcagagagaagctctcagggttcccctgatctttcgagaaaaagatggactgggaatt
aagatgcctgaccctgacttcacagtccgagatgtcaaactcctcgtgggtagccggcgg
ctggtggatgtgatggacgtgaacactcagaagggcgcggagatgagcatgtcccagttc
gtgcgctactacgagacgcccgaggcgcagcgggacaagctgtacaacgtcatcagcctg
gaattcagccacaccaagctggagcacttggtcaagcgtcccactgtggtagacctggtg
gactgggtggacaacatgtggccgcagcacttgaaggagaagcagatggaagccacaaac
gccattgcggagatgaagtacccgaaagtgaagaagtactgtctgatgagtgtgaaaggt
tgtttcactgacttccacatcgacttcggaggcacttccgtgtggtaccatgttttccgg
ggtgggaagatcttttggctgattcctccaaccctgcacaacttggcactgtacgaggag
tgggtgctgtcaggcaaacagagcgacatcttcctgggagaccgcgtggagcgctgccaa
aggatcgagctgaaacagggctacacctttttcatcccttccggctggatccatgcagtc
tacacccccgtagactctctggtatttggcggaaacatcctgcacagctttaacgtgccc
atgcagctgcggatttatgagatcgaggacagaacgcgggtgcagccgaaattccgatac
cccttctactatgagatgtgctggtatgtcttggagagatacgcgtactgtgtgacccag
cggtcctacctcactcaggagtacaagagggaatcgatgctgattgatgccccaagaaag
cccagtgtagacggcttctcctcggattcctggctggagatggaggaggagtcttgtgag
cagcagccccaggaggaggaagaggagggtgcagataaggggcccaagccacctgccgat
ggccctgcctcgcccaccagcaccccctctgaggaccaggagccccccgggaagaagccc
aaagcacctgccctgcggttcctcaaaaggactttgtctaacgagtcggaggaaagcgtc
aagtccacgacgacgcccgtagactaccccaagacgcccaccggctcgcccaccacggag
gcctctgccaaatggacccacctcaccgagtttgaactgaaggggctgaaagctctggtg
gagaaacttgaatccctcccggaaaacaagaagtgtgtccccgagggcatcgaggacccc
caggcactcctggagggcgtgaagaatgtcctgaaggagcacgcagatgatgaccccagt
ctggccatcactggggtcccagtagtcacttggccaaagaagactccaaagaaccgagcc
atagggaggcccaaggggaagctgggccccgcctccgcggtgaagttggccgccaaccgg
accacggcgggagctcgccggcgccggacgcgatgccgcaagtgcgaggcctgcctgcgg
accgagtgcggagagtgccacttctgcaaggacatgaagaagttcgggggccccgggcgg
atgaagcagagctgcatcatgcggcagtgcatcgcgccagtgctgccccacacggccgtg
tgcctcgtgtgcggcgaggcggggaaggaggacaccgtggaggaagaagaaggcaagttt
aacctcatgctcatggagtgctccatctgcaacgaaatcatccaccctggatgccttaag
attaaggagtcagagggcgtagtcaacgacgagcttccaaactgctgggagtgtccaaag
tgtaaccacgctggcaagaccgggaaacaaaagcgtggcccgggctttaagtacgcctcc
aacctgcccggctccctgctcaaggagcagaagatgaaccgcgacaacaaggacggccag
gagtcggccaagcggaggagcgagtgcgaggaggccccgcggcgcaggtcggacgagcac
cccaagaaggtgcccccggagagcatcctgcgccgaaagtcggacgatgtgcacctgagg
aggaagcggaaatacgagaagccccaagagccgagcggacgcaagcgactaaaacctggc
aaagaagataagcttttcaggaaaaagngtcccctgcggcggtcctggaagaatgcagag
gaccggatggctctagccaacaagccactgcggcgcttcaagcaggaaccggaggacgac
ctgcccgaggcgccccccaagagcagggagagcgaccactcccgctccagctcccccaca
gccggacccagcaccgagggcgccgagggccccgacgagaagaagagggtgaaggtgcgg
cggaaacggcggctccccaacaaggagctgagcaaggagctgagcaaggagctgaaccag
gagatccagaagacggagagcagcctggccagcgagaaccaccagcccatcaagtcggag
cccgagagtgagaacgaggagcccaagcggcccccgggcctctgcgagcgcccccaccgc
ttcagcaaggggctcaatggcacgacccgggagctgcgccaccagctggggcccggcctg
cgcagccccccgcgagtcatctcgcgcccccctccctccgtgtccccgcccaagtgcatc
cagatggagcgacacgtgatccggccgccgcccatcagccccccaccggactcgctgccc
ctggatgacggggcggcccacgtcatgcacagggaggtgtggatggccgtcttcagctac
ctcagccaccaagacctatgcgtctgcatgcgggtctgcaggacctggaaccgctggtgc
tgtgataagcggttatggacccgcattgacctgaaccactgcaagtccatcacgcccttg
atgctgagtggcatcatccggcgacagcctgtctccctggacctcagctggaccaatatc
tccaagaaacagctgagttggctcatcaatcggttgcctgggctccgagacttggtgctg
tcgggctgctcgtggatcgcggtctcggccctctgtagctccagctgtccattgctccgg
accctggatgtccagtgggtagaagggctaaaggatgcccagatgcgggatctcctgtct
ccgcccacggataaccggccaggtcagatggacaatcggagcaagctccggaacattgtg
gagctgcggctcgcgggcctggacatcacggacgcctccctgcgcctcatcatccgccac
atgcccctgctctccaagctccaccttagttactgtaaccacgtgaccgaccagtccatc
aacctgctcactgccgtgggcaccaccacccgggactccttaactgaaatcaacttgtca
gactgcaataaggttactgaccagtgcctgtccttcttcaaacgctgtggcaacatctgt
cacattgacctgaggtactgcaagcaagtcaccaaggagggctgtgagcagttcatagca
gaaatgtctgtgagtgtccagtttgggcaggtggaagaaaaactcctgcaaaaactgagt
tag
DBGET
integrated database retrieval system
