Miniopterus natalensis (Natal long-fingered bat): 107535893
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Entry
107535893 CDS
T05883
Symbol
SMCHD1
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1 isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
mna
Miniopterus natalensis (Natal long-fingered bat)
Brite
KEGG Orthology (KO) [BR:
mna00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mna03036
]
107535893 (SMCHD1)
03400 DNA repair and recombination proteins [BR:
mna03400
]
107535893 (SMCHD1)
Chromosome and associated proteins [BR:
mna03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
107535893 (SMCHD1)
DNA repair and recombination proteins [BR:
mna03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
107535893 (SMCHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HATPase_c_3
SMC_hinge
HATPase_c
Motif
Other DBs
NCBI-GeneID:
107535893
NCBI-ProteinID:
XP_016066976
LinkDB
All DBs
Position
Unknown
AA seq
1877 aa
AA seq
DB search
MYEYYASEGQNPLPFALAELIDNSLSATSRNTGIRRIQIKLHFDETQGKPAVAVIDNGRG
MTSKQLNNWAVYRLSKFTRQGDFESDHSGYVRPVPVPRSLNSDISYFGVGGKQAVFFVGQ
SARMISKPADSQDVHELMLSKEDFEKKEKNKESIYSGYIRNRKPSDSVHITNDDERFLHS
LISEEKEKDSFTAVVITGVQTEHIQYLKNYFHLWTRQLAHIYHYYIHGPKGNEKHTSKEV
GPFNNIDIEISMFEKGKAPKIVNLREIQDDMQTLYINTATDSFEFKAHVEGDGIVEGIIR
YHPFLYDRETYPDDPCFPSKLKDEDDDDDCFIFEKAARGKRPIFECFWNGRLIPYTSVED
FDWCTPPKKRGLAPIECYNRISGALFTNDRFQVSTNKLTFMDLELKLKDKNTLFTRILNG
QEQRMKIDREFTLWLKDCHEKYDKQIKFTLFKGIITRSDLPSKKQGPWATYSAIEWDGKI
YKAGQLVKTVKTLPLYYGSIEKFFLYGSHDGEVYATGGEVQIAMEPRALYDETKIVPIAK
LDRTVAEKAVKKYVEDEMARLPDRLSVTWPEGDELLPNEIRPAGTPIGALRIEILNKKGE
AMQKLPGTSHGGSKKLLVELKVILHSSSGNKEIISHISQHGGKWPYWFKKMENIQKLGNY
TLKLQVVLNESNADTYAGRPLPSKAIKFSVKEGKPEKFSFGLLDPPFRVGVPFNIPLEFQ
DEFGHTSQLINDIQPVLEASGLSLQYEEITKGPNCVIRGVIAKGSVNSCQGKNFNLKVIL
PGFKEESQILKIRLLPGPPHRLKVKPDSEILVIENGTAFPFQVEVLDESDNITAQPKLIV
HCKFLGAPNLPLYTVDCSSSGTSILSGSAIQVQNIKKDQTLKAKIEIPSCKNVAPVEKTI
KLLPSSHVARLQIFSVEGQKAIQIKHQDEVNWIAGDVMHNLIFQMYDEGEREIHVTAALA
EKIKVNWTPEINKEHLLQGLLPDVQVPTSVKDMRYCQVSFQDDHVSLESAFTVRPLPDEP
KHLKCELKGGKTVQMGQELQGEIVVIVTDQYGNQIQAFSPSSLSALGIAGIGLDSSQLKT
TFQENTQSISVRGIKFIPGPPGNKDLCFTWREFSDFIRVQLISGPPAKLLLIDWPDLKES
IPVINGRELQHPLIVQLCDQWDNPAPVPQVKINIIKANNLKLTPSNQQHKTDERGRANLG
VFGFYAPRGEHTMQVKAIYNKNTIEGPIIKLMILPDPEKPTRLNVKYDKDALFLAGGTFT
DFMITVISEDDSIIKNINPARISMKLWKHSHNGNRPPANAEIFSCNKIKDNDKEDGCFYF
RDKTIPNKVGIYCIQFGFMMDKALILNSEQIIVDVQPNQPVKLVPKIQPATPAVSNVHSV
ANRTLVKDLHLIITDEFNNQTGIDLVGTVIATIKGSNEEDTDTPLFIGKVRTLEFPFVAG
SAEITSLVLAENSPGKDSTEYFIIFEPQLPALSRTLESYILPFMFSDDVKKQQQMLAFAK
QKDELSQSIEMYRSVFETRKQLIDEITCQVEVAKSKEVQLRKELKTNNIDIPITQQVPHI
EALLKRKTLEQEELKKKPRRSCTLPNYTKSSGNVLGKIAHLAQIEDDRAAMVISWHLASD
MDCVVTLTTDAARRIYDETQGRQQVLPLDSIYKKTLPDWKRPLPHYRGGKLYFEPIGDPV
FARDLLTFTDNVEHCETVFGMLLGDTIILDNLDAANHYRREVVKIAHCPTLLTRDGDRIR
SNGKFGGLQNKAPPMDKLRGMVFGAPVPKQCLVLGQQIDLLQQYRNALDKLNSLNKELDS
QLNHLQSPEMKKKKQELDEREKTLKLMEQQLGMTPTRKCNDSLCHPTKVEMPDCPIPAKR
MRREVTRQNRTITKTNV
NT seq
5634 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaatattatgccagtgaaggacaaaatccgttaccatttgcccttgcagaatta
attgacaattcattgtctgctacttctcgtaacactgggattagaagaatacagatcaaa
ttgcattttgatgaaacacaaggaaaacctgctgtcgcagtgatagataatggaagagga
atgacctctaaacagcttaacaactgggccgtgtataggttgtccaaatttacaaggcaa
ggtgattttgaaagtgatcattcaggatatgttcgaccagtgccagtgccacgcagttta
aatagtgatatttcctattttggtgttgggggcaagcaggctgttttctttgttggacaa
tcagccagaatgataagcaaacctgcagattcccaagatgttcatgagcttatgctttct
aaagaagattttgagaagaaggagaaaaataaagagtcaatatatagtggatatattaga
aatagaaagccatctgattctgttcacattacaaatgatgatgagcgattcctacattct
cttatctcagaggagaaggaaaaggacagcttcactgctgtggtcatcacaggggtgcag
acagaacacatacagtacttgaaaaattatttccacctttggacaagacagttagcgcat
atttatcattactatattcatggcccaaaaggaaatgaaaaacatacatcaaaagaagtt
ggacctttcaacaacattgatattgaaatttctatgtttgaaaaggggaaggcacctaag
attgtcaacctaagggaaatacaagacgacatgcagacattgtatataaacacagcaact
gatagttttgagttcaaagctcacgttgaaggagacggtatagtggaagggattatccga
tatcaccctttcttatatgatagagaaacttaccctgatgacccatgctttccatcaaaa
ttaaaagatgaagatgatgatgatgattgttttatatttgagaaagctgcaagagggaaa
aggcctatttttgaatgtttttggaatggacgactaataccatatacatccgttgaagac
tttgactggtgtactcctcctaagaagagagggcttgcaccaattgagtgctacaataga
atatctggtgcattattcactaatgacagattccaggtcagcacaaataaactgactttt
atggatcttgagctaaaattgaaagataagaacaccctttttacaaggatcttaaatgga
caggagcagcgaatgaaaattgacagagaatttactttatggctcaaggactgccatgaa
aagtatgacaaacaaataaaatttacattgtttaaaggaataattacacgttctgatctt
ccttctaaaaagcagggcccctgggccacatactcagcaatagaatgggatggaaaaata
tacaaagcaggacagctggtcaagacagtcaagacacttcctctctattatggaagcata
gaaaaattttttctttatggtagtcatgatggagaagtatatgctacaggaggagaggtt
caaattgcaatggaaccacgagcactgtatgatgaaacaaaaattgtgccaattgcaaag
ctggataggacagttgctgagaaagctgtaaaaaaatatgtggaagatgaaatggcaagg
cttcctgataggttgtcagtaacttggcctgaaggagatgaattattgccaaatgagatt
aggcctgctggaacccccattggtgcattgaggattgaaatactgaataaaaagggggaa
gcaatgcaaaagctcccaggaacaagtcatggagggtcaaagaaactcctggttgagctc
aaagttatattacactcttccagtggaaataaagaaatcatttcacatattagtcaacat
ggaggaaaatggccttactggtttaaaaaaatggagaatattcaaaagttgggaaattat
acattgaaattacaagttgttttgaatgaaagtaatgcagacacttatgctggaagacca
ctaccgtctaaagcaattaaattttctgttaaagagggtaagccagagaagttttcattt
ggtcttctggatcctccttttcgtgttggagttccattcaatatccctctggagttccag
gatgaatttggtcatactagtcaactaataaatgatattcagccagttcttgaagcaagt
ggtttatctttacaatatgaagaaataaccaagggaccgaattgtgtaattcgaggtgtt
atagctaagggctctgtaaactcttgtcaaggcaagaattttaatctgaaggttattctt
ccgggttttaaagaagagtcgcaaattttgaaaattagattactaccaggtccccctcat
cgactgaaagtgaaacctgattctgaaattttagttatagaaaatggaacagctttccca
tttcaggtagaagttttggatgaatcagacaatataacagcacaaccaaaattgattgtt
cattgtaagtttttaggtgctcctaatcttccactctatactgtggattgcagtagttct
ggaaccagtattttatcaggatctgcaattcaagttcagaatattaaaaaagaccagacg
cttaaagctaaaattgaaatacctagctgtaaaaatgtggcacctgtggagaaaactatt
aagttgcttcccagtagccatgttgcaagattacagatattcagtgtggaaggacaaaag
gcaatccagatcaaacatcaagatgaagttaattggatagcaggcgatgttatgcataat
cttatttttcaaatgtatgatgaaggagaaagagaaatccatgtaacagcagctttagca
gagaaaattaaagttaactggactcctgagattaacaaagaacacttgctacagggcctg
cttcctgatgtacaagtaccaacatctgtaaaagatatgcgctattgccaggtttctttc
caagatgatcatgtgtctttggaaagtgcatttacagtaagacccctacctgatgaacct
aaacatctaaagtgtgagttgaaaggaggaaaaacagtacagatgggccaagagcttcaa
ggggaaatagttgtaatagttacagatcagtatggaaatcagattcaagcattttcacca
agttccttatctgccttgggaattgctggcattggactcgatagctcacagttgaaaact
acctttcaggaaaatacacagagtataagtgtaagaggaatcaaatttattccaggtcct
cctggaaataaggatctttgttttacttggcgtgagttttctgactttattcgagtgcag
ctcatttctggaccaccagctaaacttctccttatagactggccagatttaaaggagtct
attccagtgattaatggaagagaattacagcatcctctcattgttcaactttgtgatcag
tgggataatccagcacctgtaccacaggttaaaataaacatcataaaagctaacaattta
aagctcactccttcaaaccaacagcataaaacagatgaaaggggcagggctaatttggga
gtgttcggtttttatgcccctagaggagaacatactatgcaggtgaaagccatctataac
aagaataccatagaaggacctataattaaattaatgattcttccagatcctgaaaaaccc
acccgtctcaatgttaaatatgacaaagatgctttatttttagcagggggtactttcact
gattttatgattactgttatttctgaagatgatagtatcattaaaaatattaatccagca
cgtatttccatgaaattgtggaagcactctcacaatgggaaccgaccaccagcaaatgca
gaaatatttagttgtaataaaataaaagataatgacaaggaagatggctgcttctacttc
agggataaaacaattcctaataaagtgggaatatattgtatccagtttggttttatgatg
gataaagcacttattcttaacagtgaacagattatagttgatgttcaacctaatcagcct
gtgaagttagtacctaaaattcagccagctacaccagctgtttccaatgttcactcagtt
gccaataggaccctggtcaaagatttacatcttattatcacggatgagttcaacaatcag
actggaattgatttggttggcactgtaatagctaccatcaaaggttctaacgaggaagat
actgatacaccactcttcattgggaaagttagaacacttgaatttccttttgtagcaggt
tctgctgaaatcacgagtctagtgctggcagaaaatagtcctggaaaggatagtactgaa
tattttattatatttgagcctcagctaccagctttgtcaagaacattagaatcatatatt
ctaccatttatgttttctgatgatgttaagaagcagcaacaaatgctggcatttgcaaaa
caaaaggatgaattatctcagtctattgaaatgtatagaagtgtatttgaaaccagaaaa
cagcttattgatgaaataacgtgccaagttgaagtagcaaaatcaaaagaggtccagttg
cgaaaggaactaaaaacaaataatattgacattcccataacacaacaggtgccacacatt
gaagcacttttgaaaagaaagacattagaacaggaagaactaaagaaaaaacctagaaga
tcatgtactcttccaaactatactaaaagcagtggaaatgttttgggaaagattgcacac
ctggcacaaattgaagatgatagagctgcaatggttatttcttggcatctggcaagtgat
atggattgtgttgtcaccctgaccactgatgctgcacgtcgtatctatgatgaaacccaa
ggtcgtcagcaggtgttgccccttgattctatttataagaagactcttccagattggaaa
agacctctgcctcattatcgaggtggaaaattatattttgaacccattggagatccagtc
tttgcccgagatttgttaacatttacagataacgtagaacattgtgaaacagtatttggt
atgctattaggagacaccattattttggataatttagatgctgccaatcattacagaaga
gaggttgttaaaattgcacactgtcctacactgctcaccagagatggagatcgcattcga
agtaatgggaagtttgggggccttcagaataaagctcctccaatggacaaacttcgggga
atggtgtttggagctccagtaccaaagcagtgcctggtcttagggcaacaaatagatctt
cttcaacagtatcgtaatgctctagacaagttgaacagtctgaacaaggaacttgacagt
cagttaaaccaccttcagtctcctgagatgaagaagaaaaaacaagaacttgatgaacga
gagaaaactctgaaactaatggagcaacaactaggtatgactcccacacgtaagtgtaat
gattcattatgtcatccaacaaaggttgaaatgccagattgtccaattcctgctaaaaga
atgagaagagaagttacaagacaaaataggactataaccaaaacaaatgtgtga
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integrated database retrieval system
