Merops nubicus (carmine bee-eater): 103773298
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Entry
103773298 CDS
T08417
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103773298 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnb03400
]
103773298 (LIG4)
Enzymes [BR:
mnb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
103773298 (LIG4)
DNA repair and recombination proteins [BR:
mnb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103773298 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
Tox-REase-9
mRNA_cap_enzyme
DUF2948
SKA1
Motif
Other DBs
NCBI-GeneID:
103773298
NCBI-ProteinID:
XP_008938911
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MASTAAAQPAKNTVASHVPFGDLCSTLERMQTCKSRPEKTKCFREFLDSWRKFHHALHQK
EKEVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDAAKLLNYRTPS
GSRGDAGDFATIAYFVLKPRSPKRGRLTIEQVNEHLDAIANNNAAKNKGLLKKSLLQLIT
QSTALEQKWLIRMIIKDLKLGVSQQTIFSIFHPDAAELHNVTTDLEKVCRQLHDPSVSLS
DVSISLFSAFKPMLAAIADVQQIEKQMNHRTFYIETKLDGERMQMHKDGDVYKYFSRNGF
DYTQQFGASPLDGSLTPFIHPVFKSHVQNCILDGEMMAYNPETQTFMQKGNRFDIKRMVE
DSELQTCFCVFDVLMVNDEKLGHEVLSRRYEILNSVFTPVTGRIQVVQKKSARTRKDVID
ALNEAIDNREEGIMVKDPTSTYKPDKRGEGWLKIKPEYVNGLMDELDLLIVGGYWGKGSR
GGMMSHFLCAVAETPPPNQKPTVFHTICRVGSGYTMKELQDLGLKLAKHWKPYQRKDPPS
NILCGTEKPEMYIEPCNSVIVQVKAAEIVASDMYKTDCTLRFPRIERIREDKEWHECMTS
DLLEDLRRKAEGKLASKHLHMDENEEPREKKRRTVPKVKKIIGIAEQFKAPDLSSVNKVS
NMFEDVEFCVMTGTRNYSKAELESRIAECGGSVVQNPGPETYCVIAGAENLRVKNIISSN
RYDVVRAEWLLQCFHSKMLVPWQPACMIHMCPETKEHFAREYDPYGDSYTADTDLAQLQE
VFSRMKDKKRMSLDSIVELEERYSWNSCQLSIFRGSTVYVDCYAVVSQPRTKIHGTTLST
RALELRFHGAKVVSCLEEGVSHVVIGEDHSRVKELKALRRTFGKKFQIVSELWVTESVEE
GVSKSENQYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacagctgctgcccagcctgccaagaacacggtggcctctcacgtgcccttt
ggagatctctgctccaccctggagagaatgcagacgtgcaaatctcgcccagagaagacc
aagtgtttcagggagttcctggattcctggaggaaattccaccatgccctgcatcagaaa
gaaaaagaggtgacggattcgttttacccagccatgagacttattctcccccagctggag
agagagaggatggcttatgggattaaagaaaccatgcttgccaagctctacatcgagctg
ctgaatttaccaaaagatgggaaagatgctgcaaagctcttaaattacaggacaccctct
ggctcccggggagatgctggagatttcgccaccatcgcctactttgtcttgaaacccagg
agcccaaaacgagggaggctgaccattgagcaggtcaatgaacacctggatgcaatagcc
aacaacaatgctgcgaaaaacaaggggctgttaaagaaaagccttctgcagttaattacc
cagagcacagctctggagcagaaatggctcatccgcatgattatcaaggatctgaagctt
ggtgtcagccagcagaccatcttctccattttccaccccgatgctgctgagctgcacaac
gtcaccacagatctggaaaaagtctgcaggcagctgcacgacccctctgtctccctgagt
gatgtctccatctccttgttttctgccttcaaacccatgctggctgctattgccgacgtg
cagcagattgagaagcagatgaaccacaggacattctacatagagactaagctggatggg
gaacggatgcagatgcacaaagatggagatgtgtataagtatttttccagaaatggcttt
gactacactcagcagtttggggcttcccccctggatgggtcattaacaccttttattcat
cctgtctttaagagccacgtccaaaattgcatcctggatggtgagatgatggcttacaac
cctgagacacaaaccttcatgcaaaaagggaacagatttgacataaaaaggatggtggag
gactctgagctgcagacctgcttctgtgtgtttgatgtcttgatggttaacgatgagaaa
ttggggcacgaagtgctgagcaggagatatgaaatattaaacagtgtgttcaccccagtg
acaggcaggatacaagttgtacagaaaaaaagtgccagaacaagaaaagatgtgattgat
gctttaaatgaggccatagataacagggaggaagggattatggtgaaagatcccacgtcc
acctacaagcctgacaagcgtggggagggctggttaaaaatcaagccagaatatgtcaac
gggctgatggatgagctcgaccttctgattgttggtggctactgggggaagggctcaaga
ggtgggatgatgtctcattttctctgtgctgtggcagagacacctcctcccaaccaaaaa
cccaccgttttccacaccatctgtcgggttggctctggctataccatgaaggagttgcag
gatctaggtttgaaactggctaaacactggaagccctaccagaggaaggaccctcccagc
aacattttgtgtgggactgagaaacctgagatgtacattgagccttgcaactctgtcatc
gttcaggtcaaggccgctgagattgttgccagtgacatgtacaaaactgactgtactttg
aggtttccacggattgagaggataagagaggacaaggagtggcacgagtgcatgacttca
gacctgctggaggatctcaggaggaaagcagaagggaaactggcatctaaacaccttcat
atggatgagaacgaggagccacgggagaaaaaaaggagaacggtgccaaaggtgaaaaag
atcattgggattgctgagcagtttaaagctcctgatctttccagtgtgaacaaggtttcc
aatatgtttgaagatgtcgagttctgtgttatgacaggaacaaggaattactccaaggct
gagctggagagcagaatagctgaatgtggtggcagcgtggtgcagaacccagggccagag
acttactgtgtcatcgcaggggctgagaacctgagggtgaagaacatcatctcctccaac
aggtacgacgtggtgagggcagagtggctcctgcagtgtttccacagcaaaatgctggtg
ccttggcagccagcctgcatgattcacatgtgtcctgagacaaaggagcatttcgcccgg
gagtacgatccttatggagacagctacactgcagacacagacctggcccagctccaggag
gtgttctccaggatgaaagacaagaagaggatgtctttggactccattgtggagttagaa
gaacgttattcatggaacagctgccagctcagcatattcagaggcagcactgtctatgtg
gactgttatgctgttgtcagccagcccagaaccaaaatccatggcacaacactatcaacc
agagctctggagctccgttttcatggggcaaaagtagtctcttgccttgaagaaggggtc
tcccatgttgtcataggagaagatcattccagggtgaaagagttgaaagcactcaggagg
acatttgggaagaaatttcagattgtgtctgagctgtgggtaacagagtcagtggaggag
ggagtctccaagagtgaaaatcagtatttaatttaa
DBGET
integrated database retrieval system
