Merops nubicus (carmine bee-eater): 103773506
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Entry
103773506 CDS
T08417
Symbol
DDX58
Name
(RefSeq) probable ATP-dependent RNA helicase DDX58
KO
K12646
ATP-dependent RNA helicase DDX58 [EC:
5.6.2.6
]
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb04622
RIG-I-like receptor signaling pathway
mnb04623
Cytosolic DNA-sensing pathway
mnb05164
Influenza A
mnb05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103773506 (DDX58)
04623 Cytosolic DNA-sensing pathway
103773506 (DDX58)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
103773506 (DDX58)
05168 Herpes simplex virus 1 infection
103773506 (DDX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mnb04054
]
103773506 (DDX58)
Enzymes [BR:
mnb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103773506 (DDX58)
Pattern recognition receptors [BR:
mnb04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
103773506 (DDX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C
RIG-I_C-RD
DEAD
CARD_2
ResIII
Helicase_C
AAA_19
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
103773506
NCBI-ProteinID:
XP_008939124
LinkDB
All DBs
Position
Unknown
AA seq
824 aa
AA seq
DB search
MHRELLKRIEATMIEVDPVALMPYINTCLIERDCEEILQISEYRSKAAGITKLIECLCRS
DKENWPKSLQLALDNTGYYSASELWDAREDSCTEAYSEMTDASESSFETTMTFSEEAECD
NLSENLDSGSEGIYHSSPVYEPKKARSYQTELAQPAISGKNTLICAPTGSGKTFVALLIC
EHHFQNMPSGQKAKVVFLATKVPVYEQQKTVFKEYFERSGYSVQGISGETIANVSVERVI
QDSDIIVLTPQILVNSIEQGIISSLSIFTLMIFDECHNTTGNHPYNVLMTRYLEQKFDSS
ANHLPQIVGLTASVGVGNAKTVKETIEHICTLCSYLDIQAISTVRENKQELQRFGSKPEM
HVRWVKMRVQNHFADIISGLMSKTEALMRKIYSVDTISHINKNDFGTQKYEQWIVTTQKK
CKLLQLADKEKESSICRDLFICTEHLRKLNDTLIISEDARIEDALLYLTEFFTNVKNGPY
TELEKQLTAQFEEKEPELTALSKDESNENPKLEELACILDEAYRYNPQTRTLLFAKTRAL
VAALKKWIEANPLLSYITSDVLMGRGRRDQKTGMTLPMQKIILDAFKTKKDMRLLIATSV
ADEGIDISECNLVVLYEYFGNVTKMIQVRGRGRARDSKCILVTSKAEVVENEKYNRYKEE
MMNEAIEKLQNWDEMTFSRKIQSLQMKDKVLRDSRKKDRRCQVVEGKRNLLCGKCKAYAC
STDDIRVIKESHHTVLGDAFKERYITKPHRKPVQFDCFEKKSKMHCQNTNCQHDWGITVK
YKTFDNLPVIKIKSFVVENVETGTQMDFQKWRDINFALKNFDDE
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgagagctgctgaagcggatagaagcaacaatgatagaagttgaccctgtagcc
ctcatgccttacataaacacatgtctgatagaaagggattgtgaggagatcctgcagatt
agtgaatatagaagcaaagcagctgggataacgaaactcattgaatgtctctgtcgatcc
gataaagaaaactggcctaaaagtcttcagctggcactagataacactggatattatagt
gcaagtgaactgtgggatgcgagagaagatagttgcacagaagcttatagtgaaatgaca
gatgcctctgagagcagctttgaaaccacaatgacattttctgaagaagcagaatgtgat
aatctcagtgaaaatctagattcaggttcagaagggatctatcattcttcacctgtttat
gagccaaagaaggctcggagctaccagactgaacttgcacagcctgctattagtggaaaa
aacacattgatatgtgcccctacaggatctggaaaaacttttgtggcacttctgatttgt
gaacaccatttccaaaacatgccctcaggacaaaaggcaaaagttgtctttcttgcaacc
aaagtgccagtgtatgaacaacagaaaactgtatttaaggagtattttgaaagaagtgga
tattctgttcaaggaattagtggtgaaacaattgcaaatgtctcggtggaaagggttata
caggacagtgacatcattgtgctaacaccccagattcttgtgaacagcattgagcaaggg
atcattagctccctctccatcttcactctgatgatatttgatgagtgccacaacactacg
ggcaaccacccttacaatgtgttaatgaccagatacctggaacaaaaatttgactcctct
gcaaaccacctacctcagattgtaggtttaactgcttctgttggagttggtaatgccaag
accgtcaaggaaacaatagagcacatctgtaccctctgctcctaccttgacatacaggcc
atatccaccgttagagagaacaaacaggaactgcagagatttggaagcaagccagaaatg
catgtcagatgggttaaaatgcgagttcagaatcactttgcagatatcatctcaggtctg
atgtccaagacagaggcattgatgaggaagatttactcagtggatactatctcccatatc
aacaagaatgactttggaacacagaaatatgaacagtggatagttaccactcagaagaag
tgcaaactgttgcaactggcagataaggagaaggagagcagcatttgtagagaccttttc
atttgcactgaacacctgcggaaattaaacgatactctcatcatcagtgaggatgctcgc
attgaagatgctttattgtacctaactgaatttttcacaaatgtcaaaaatggaccatac
acagaattagagaagcaactgacagctcaatttgaagagaaagaaccagaactgactgcc
ctttcaaaagatgaatcaaatgagaatcccaagctggaagagcttgcttgcatcttggat
gaagcataccgctataatccacagacccgcactcttctctttgctaagacaagagcctta
gtagctgctttgaagaagtggatagaagcaaaccctctacttagctacataacgtctgat
gtgttgatgggtcgtggaagaagagatcaaaagacaggtatgaccctcccaatgcagaag
attatactggatgcattcaaaacaaagaaagacatgagactgctaattgctacatctgtt
gctgatgaaggcattgatatttctgagtgcaaccttgttgtgctgtatgaatacttcggt
aatgtcaccaaaatgatccaagtcagaggtcgtggaagggcaagagacagcaagtgtatc
cttgtgacaagcaaagcagaagtggttgaaaacgagaaatacaaccgctataaggaagaa
atgatgaatgaagctattgaaaagctacagaactgggatgaaatgacattttccagaaag
atacaaagcttacaaatgaaggacaaggtgttacgagactccagaaagaaagacagaaga
tgtcaggtagtggaagggaaaagaaatcttctgtgtggtaaatgcaaagcatatgcctgc
agtacagatgacatcagagttataaaggaatctcatcatactgtcctaggagatgcgttc
aaggagcgttacataacaaagcctcacaggaagccagtccagtttgattgttttgagaaa
aaaagcaagatgcattgccaaaatactaattgccagcatgactggggaatcacagtgaag
tataagacattcgataatctaccagtgatcaaaatcaaaagctttgtagtagagaacgtt
gaaaccgggacacaaatggattttcagaaatggagagacataaactttgctttgaagaat
tttgatgatgaataa
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