Merops nubicus (carmine bee-eater): 103776802
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Entry
103776802 CDS
T08417
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mnb
Merops nubicus (carmine bee-eater)
Pathway
mnb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103776802 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnb03041
]
103776802 (EFTUD2)
Spliceosome [BR:
mnb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
103776802 (EFTUD2)
Complex C
U5 SnRNP specific factors
103776802 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
GTP_EFTU_D2
EFG_IV
EFG_III
EFL1
EF-G_D2
Septin
FANCL_d3
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
103776802
NCBI-ProteinID:
XP_008942577
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGRESKDLDEXXXXXXXXMGEHDEDHPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQTLPVTVYEMDFLAD
LMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVGI
KSTPVTIVLPDTKGKSFLFNIIDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTER
LIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLVLS
PLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKAP
TSSSQRSFVEFILEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVCK
KFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGVDSDLGEAMSECDPDGPLMCHTTKM
YSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIEV
NRVPAGNWVLIEGVDQPIVKTATVTEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLCD
E
NT seq
2344 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacctgtacgatgagtttgggaactacatcgggccggagctggactcggac
gatgatgacgatgagttgggcagagagtcgaaagatctggatgagnnnnnnnnnnnnnnn
nnnnnnnncatgggggagcacgacgaggaccacccggggatggaggtggtgctccatgag
gataagaagtactaccccaccgccgaggaggtctacgggcctgaagtggagaccattgtc
caggaggaggacacgcagccgctcacggagcctattattaaacctgtgaaaacaaaaaag
ttctccctgatggaacagacgttaccggtcactgtctacgagatggatttcctggcagat
ctgatggacaactcggagctgattcggaacgtgactctgtgtgggcaccttcaccacggc
aagacttgttttgttgactgcctgatagaacagacgcacccggaaatccggaagcgctac
gaccaggacctttgctacactgatatattgttcacagagcaagagaggggagtggggatc
aagagcacaccagtgactattgttctgccggacaccaaggggaagtcttttctcttcaac
atcatcgacactccaggtcatgtcaatttttcggacgaggtgacggccgggctgcggatc
tcggacggcgtcgtgctcttcatcgacgcggccgagggggtgatgctgaacacagagagg
ctgatcaagcacgcggtgcaggagcgcctggcggtcactgtctgcatcaacaagatcgac
aggctgatcctggagctgaagctgcctcccacggacgcctactacaaactccggcacatc
gtggacgaggtcaacgggctcatcagcatgtattccacagatgagaacctcgttctgtct
ccccttctgggcaacgtgtgcttctccagctcgcagtacagcatctgcttcacgctggga
tcttttgcaaagatttatgcagacacatatggagacatcaactatcaggagtttgcaaag
aggctttggggtgacatctacttcaacccaaagacccgcaagttcacgaagaaggcgcca
acgagcagctcccagcgcagtttcgtggagttcatcctggagcccctgtacaagatcctg
gctcaggtggtgggggatgtggacacgaccctgcccaggactctggatgaacttggcatc
cacctgaccaaagaggaattgaaactgaacattcggcccctcctgcgacttgtctgcaag
aagttctttggggaattcacaggctttgtggacatgtgtgtgcagcacatcccctcccca
aaggtgggagccaagacgaagatcgagcacacctacaccggcggggtggactctgacctg
ggagaggccatgagcgagtgcgaccccgacggtcccctgatgtgtcacaccaccaagatg
tacagcacagacgacggcgttcagttccacgccttcggcagggtgctgagcggcaccatc
cacgcggggcagcccgtcaaggtcctgggagaaaactacaccctggaggatgaggaggat
tcccagatctgcaccgtcggccgcctctggatctcggttgcaaggtatcacattgaggta
aatcgggttcctgctggcaactgggtgctgatagaaggagtggaccagcccatagtgaag
actgcgaccgtcacggagcctcggggcaatgaggaggctcagatcttccgccctttgaag
ttcaacaccacatctgtcatcaaaatagctgtagagccagtcaacccctcagagctcccc
aaaatgttagatggtctccgcaaggtcaacaagagttacccctcgctcaccaccaaggtg
gaggagtctggggagcacgtgatcctgggcacgggggagctctacctcgactgcgtgatg
cacgatctgcggaagatgtattctgagattgacatcaaggtggccgatcctgtcgtgacc
ttctgcgagacggtggtggaaacgtcctccctgaagtgctttgctgagacacccaacaag
aagaacaagatcaccatgattgctgagcctctggagaaggggctcgcagaggacattgaa
aatgaagtggtgcagataacgtggaacagaaagaagctgggtgaatttttccagaccaag
tacgactgggatttgctggcagcccgttccatctgggcctttgggccagatgccactggc
ccaaacatcctggtggatgatacactgccctccgaggtggacaagtcgctgctgggctct
gtgaaggacagcatcgtgcaggggtttcagtgggggaccagggaagggcccctctgtgat
gaat
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