KEGG   Monoraphidium neglectum: MNEG_12967
Entry
MNEG_12967        CDS       T05028                                 
Name
(RefSeq) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
mng  Monoraphidium neglectum
Pathway
mng03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MNEG_12967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mng03019]
    MNEG_12967
Messenger RNA biogenesis [BR:mng03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MNEG_12967
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_25 AAA_5 AAA_28 nSTAND3 AAA_29 AAA_23 AAA_22 PduV-EutP NACHT Arf AAA_15 ATP-synt_ab AAA TsaE AAA_16 SRP54 nSTAND_NTPase5 Zeta_toxin DLIC ORC-CDC6-like
Other DBs
NCBI-GeneID: 25730382
NCBI-ProteinID: XP_013894015
UniProt: A0A0D2MJ16
LinkDB
Position
Unknown
AA seq 299 aa
MAAATTAQAPQEPAAVSLNGLTFSYPGCAASVKDANLELPRGSRCLLIGANGAGKTTLLQ
LLAGKYMVGRSVITVLGRSPFYDLQLTCSGQLSYLGTSWRKDVAFAGYGVPHQADITAGK
MIFGVEGVDPARRERLIRLLDIDLYQRLTTMSDGQRRRVQIAMGLLKPYDVLLMDEITVD
MDVLGRQDLLDFFRDECESRGASIVYATHIFDGLEGWVTHLAYLENGQMKIGGGRSVLPE
LKPGVKLLHVVEGWLRKEKEARQAREREQRASGAAPAAAPVAPTRTPFDMPSKHLAFFR
NT seq 900 nt   +upstreamnt  +downstreamnt
atggcagcagctacgactgcgcaggcgccgcaagagccagcggcagtgagtctcaatggt
ctcacattctcctacccgggctgcgcggcctctgtgaaggacgcgaacctggaactccct
cgtggcagccgctgcctcctcatcggcgccaacggagcgggcaagacgaccctgctgcag
ctgctggcaggaaagtacatggtgggacgcagcgtaatcaccgtgctggggcgctcaccc
ttttacgacctgcaactgacgtgcagcggccagctgtcgtacctggggacatcctggcga
aaggacgtcgcctttgcgggctacggcgtgccccaccaggcggacatcaccgcgggcaag
atgatcttcggcgtggagggcgtggaccccgcgcgccgcgagcggctgatccggctgctg
gacattgacctgtaccagcggctcaccaccatgagcgacggccagcggcggcgcgtccag
attgcgatgggcctgctcaagccctacgacgtgttgctgatggatgaaattacagtggac
atggacgtgctggggcgccaggacctgcttgacttcttcagggacgagtgcgagtccagg
ggggcaagcatcgtgtatgcgacccacatattcgatggcctggagggttgggtgacgcac
ctggcctacctggagaacgggcagatgaagataggcggcggccgcagcgtcctgcctgag
ctcaagcccggcgtgaagctgctgcacgtggtggagggctggctgcgcaaggagaaggag
gcgcggcaggcgcgcgagcgggagcagcgggcaagcggcgcggccccggcggcggcgccc
gtcgcgcctacacgcacgccgtttgacatgccctccaagcacctggccttcttccggtga

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