KEGG   Monoraphidium neglectum: MNEG_1428
Entry
MNEG_1428         CDS       T05028                                 
Name
(RefSeq) CCR4-NOT complex subunit CAF16
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
mng  Monoraphidium neglectum
Pathway
mng03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MNEG_1428
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mng03019]
    MNEG_1428
Messenger RNA biogenesis [BR:mng03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MNEG_1428
SSDB
Motif
Pfam: ABC_tran AAA_21 AAA_29 AAA_28 AAA_25 Luciferase PduV-EutP AAA_15 Arf AAA_23 AAA_22 ORC-CDC6-like nSTAND3 AAA_24
Other DBs
NCBI-GeneID: 25731826
NCBI-ProteinID: XP_013905545
UniProt: A0A0D2NQB3
LinkDB
Position
Unknown
AA seq 276 aa
MNLELGPGSRCLLIGANGAGKTTLLKILGGKHMVPRESVEVLGRPPFHDTALTTSGDLSY
VGGNWTRDIAFAGTSIPLTGDFPASRMIDSVPGVDAARKERLIQVLDIDPSWRMHQVSDG
QRRRVQICVGLLRPFKVLLLDEITVDLDVLGRSDLMAFLADECVQRGATIVYATHIFDGL
EAWPTHVAYVARGRLQFVTPAEQIPHLREGRLLEMVGALLAEERDALLKAGASKPVTYDP
SREGEVAAFSYAFNNGWVPGTLATSLANSSNAVMRC
NT seq 831 nt   +upstreamnt  +downstreamnt
atgaaccttgagctcggcccgggcagcaggtgcctgctgatcggcgccaacggcgcgggc
aaaaccaccctactgaaaatcttgggcggcaagcacatggtgccgcgggagtctgtggag
gtgctgggccgcccgccgttccatgacacggccctcaccaccagcggggacctgtcttac
gtcgggggcaactggacgcgcgacatcgcgtttgccgggacatccatcccactcacgggc
gacttcccggcgtcgcgcatgatcgactctgtcccgggcgtcgacgcggcccgcaaagag
cggctgatccaggtgctggacatcgacccctcgtggcgcatgcaccaggtgtctgacggg
cagcggcggcgcgtccaaatctgtgtgggccttctgcggcctttcaaggtcctgctcttg
gacgagatcacggtggatctggacgtcctcgggcgatctgatctgatggccttcctcgcg
gacgagtgcgtccagcgcggcgccaccatcgtgtacgccacccacatcttcgacggcctc
gaggcctggccgacacacgtggcatacgtcgcgcgcggccgcctccagttcgtgaccccc
gccgagcagatcccccaccttagggagggccgcctgctggagatggtgggggcgctgctg
gcggaggagcgggacgctctcctgaaggccggcgccagcaagcccgtcacctacgacccg
tctcgcgagggcgaggtggccgcgttctcgtacgccttcaacaatggctgggtccccggg
acgctggccacgtccctggcgaacagcagcaacgcggtgatgcgctgctga

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