KEGG   Monoraphidium neglectum: MNEG_14342
Entry
MNEG_14342        CDS       T05028                                 
Name
(RefSeq) small nuclear ribonucleoprotein B and B'
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
mng  Monoraphidium neglectum
Pathway
mng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MNEG_14342
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mng03019]
    MNEG_14342
   03041 Spliceosome [BR:mng03041]
    MNEG_14342
   03032 DNA replication proteins [BR:mng03032]
    MNEG_14342
Messenger RNA biogenesis [BR:mng03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     MNEG_14342
Spliceosome [BR:mng03041]
 Complex A
  U1 snRNP components
   Sm proteins
    MNEG_14342
  U2 snRNP components
    MNEG_14342
 Complex B
  U1 snRNP components
    MNEG_14342
  U4/U6.U5 tri-snRNP components
    MNEG_14342
 Complex C
  U2 snRNP components
    MNEG_14342
DNA replication proteins [BR:mng03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     MNEG_14342
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 25731895
NCBI-ProteinID: XP_013892641
UniProt: A0A0D2LVL0
LinkDB
Position
Unknown
AA seq 173 aa
MRVTVVDGRQIVGRFMAYDRHMNLVLGDAEEFRKLPPKKGKSEEEREERRVLGLVLLRGE
EVISLTIEGPPPQEDLRGSKSQVAPPGSGAGRAAGRGVPVAAPGQAPAGLAGPARGVGGP
APGMMMPRPQMQAPPMMRPPGMPPPGMPPPGMGMPPPGMRPPGDRPVRSPGTG
NT seq 522 nt   +upstreamnt  +downstreamnt
atgcgggtcaccgtcgtcgacgggcgccagattgttggacggttcatggcttacgaccgc
cacatgaacctggtgctgggggacgcggaggagttcaggaagctgccgcccaagaagggc
aagagcgaagaggagcgcgaggagcggcgcgtgctcggcctggtgctgctgcgcggcgag
gaggtgatctcgctgaccatcgagggcccgcccccccaggaggacctgcgcggcagcaag
tcgcaggtcgcgcctccggggagcggcgccgggcgcgcggcggggcgcggcgtgcccgtc
gcggcaccggggcaggcgccggcgggcctggcgggccccgcgcgcggcgtgggcggcccg
gcccctggcatgatgatgccccgcccccagatgcaggcgccgcccatgatgcggccgccg
gggatgcccccgccgggcatgccgccgccggggatgggcatgccgccgccggggatgcgg
ccgccaggagaccgaccggtgcgctctccggggaccggctag

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