Mycoplasma nasistruthionis: FG904_03000
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Entry
FG904_03000 CDS
T06848
Symbol
ligA
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mnh
Mycoplasma nasistruthionis
Pathway
mnh03030
DNA replication
mnh03410
Base excision repair
mnh03420
Nucleotide excision repair
mnh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FG904_03000 (ligA)
03410 Base excision repair
FG904_03000 (ligA)
03420 Nucleotide excision repair
FG904_03000 (ligA)
03430 Mismatch repair
FG904_03000 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnh03032
]
FG904_03000 (ligA)
03400 DNA repair and recombination proteins [BR:
mnh03400
]
FG904_03000 (ligA)
Enzymes [BR:
mnh01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
FG904_03000 (ligA)
DNA replication proteins [BR:
mnh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FG904_03000 (ligA)
DNA repair and recombination proteins [BR:
mnh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
FG904_03000 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FG904_03000 (ligA)
MMR (mismatch excision repair)
DNA ligase
FG904_03000 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FG904_03000 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
BRCT_2
RNA_ligase
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QCZ36952
UniProt:
A0A5B7XW25
LinkDB
All DBs
Position
737852..739897
Genome browser
AA seq
681 aa
AA seq
DB search
MTKPMTKKQQSLDLILTLTQEINKLNHAYYDLDQPLVDDYVYDLKLRQLEDLERKYPDLI
QPDSPTVKIGGVPSLEFSKYRHERPMLSLAKAYSLDEVAKFIDDTIQSLNDKNISFNLEP
KIDGLSLTLHYNNGKLQKAITRGNGQIGEDVTKNARLIKSIPKHINYSNSLEIRGEIYIS
KTQFELTNSALRQKYEQQIAQLTDQNEVAKVKQEEFANTRNMAAGTLRQKNGSLVAERNL
QFLAYDIVDPEKHNLTLQSQIVPFLNNLGFQSHDVSYNESELNNIFKRIENFESIKNSFE
YDCDGFVIKLNQLQYWDSLGKTAKFPKYAIAFKYKTEEAYPIITNILTTVGRTGKITYVA
EFDKVELNQTMVQKATLHNYDFIENLNLNIGDQVVIIKSGEIIPKIIELKQKLTQGVFDK
TTHCPICNSPLVEYPNIVDQFCDNINCPGKVQKNFIHAVSRNAFNILTLGTKNIETFLEQ
GYLTDLASIFELEKYKEQMLQLPSYQDKKVNGILDSIQEAKNIELPKALYALGIKNIGKE
VAILLTNKINKLSDFIDYDFDSLLLINSIGPEIVSSLKEYFSDEKNIETIKRLDSHLKYI
QNQQTDGKLSNLTFVISGTLSVSRNEMSDLIEKNGGKVASSISKNVNYLLCGENVGEAKI
SKAQKLNIPTISEVELLDLIK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaccaatgactaaaaaacaacaatctttagatttaattttgactttaacacaa
gaaattaacaaactaaatcatgcatattatgacctagatcaacccttggttgatgattat
gtttatgacttaaaattaaggcaattagaagacttagaacgcaagtacccagacttaatt
caaccagattcaccgactgttaaaataggtggagtacctagcttagaattcagtaaatac
aggcatgaaagaccaatgctatctttagctaaagcctattccttagatgaggttgctaaa
ttcattgatgatactattcaatcattaaatgacaaaaatattagttttaatttagaacca
aaaattgatggtttatctttaactttgcactataacaacggtaaattacaaaaagcaatt
acacgaggtaatggacaaatcggagaagatgttactaaaaatgcaaggttgataaaatcg
attcctaagcatataaattattcaaactccctagaaataaggggtgaaatatatatatca
aaaacccaatttgaattaacaaatagtgctttaagacagaaatatgaacaacaaattgct
caactgactgatcaaaatgaagttgctaaagttaaacaagaagaatttgctaacactaga
aatatggcggctggaacattgcgccaaaaaaatggtagcttagtagcagaaagaaacttg
caatttttagcttatgatattgttgaccctgaaaaacataatttaacattgcaaagtcaa
atcgttcctttcttaaacaacctaggttttcaaagtcatgatgttagttacaatgaatct
gaattaaataatatttttaaaagaattgaaaattttgaaagtataaaaaacagttttgaa
tatgactgtgatggatttgtaattaaattaaatcaactgcaatattgagatagcttaggt
aaaactgctaagtttcctaaatatgcaattgcattcaaatacaaaactgaagaagcatat
ccgattattacaaacattcttacaacggttggtcgaacaggaaaaataacttatgttgct
gagtttgataaagttgaattaaatcaaacaatggtacaaaaagcaacgcttcataattat
gattttattgaaaatttaaatcttaacattggtgatcaagtagtaattatcaaatcgggt
gaaatcattcctaaaataatcgaattaaaacaaaagcttacacaaggtgtttttgataaa
acaacacattgtccaatttgtaattcaccattagttgaatatccaaacatagttgatcaa
ttttgtgacaacattaactgtcccggtaaagttcaaaaaaactttattcatgcagtgtct
agaaatgcttttaatattttaacattaggtacaaaaaatattgaaaccttcttagaacaa
ggttatttaactgatttagcatcaatttttgaattagaaaaatataaagagcaaatgttg
caactacctagttatcaagacaaaaaagtaaatggtattttagatagcatacaagaagct
aaaaacattgaactacctaaagcattgtatgccttaggaattaaaaatattggtaaagaa
gtagcaattttactaactaacaaaattaataaattaagtgattttattgattatgatttt
gattcgcttttattaattaattcaatcggacctgaaatagtttcatcactaaaagaatat
tttagtgatgaaaaaaatatagaaacaatcaaaagattagatagtcatttaaagtatatt
cagaaccaacaaacagatggtaaattaagcaatttaacttttgtaatttctggaacttta
tcagtttccagaaatgaaatgtcagatttaattgaaaaaaacggtggcaaagtagcttca
tctatttcgaaaaatgtgaattatttattgtgcggtgaaaatgttggtgaagctaaaatt
tctaaggctcaaaagctaaatattccaacaataagtgaagttgaattattagatttaatt
aaataa
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