Moraxella nonliquefaciens: I6G26_09620
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Entry
I6G26_09620 CDS
T07003
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mnn
Moraxella nonliquefaciens
Pathway
mnn03030
DNA replication
mnn03410
Base excision repair
mnn03420
Nucleotide excision repair
mnn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I6G26_09620 (ligA)
03410 Base excision repair
I6G26_09620 (ligA)
03420 Nucleotide excision repair
I6G26_09620 (ligA)
03430 Mismatch repair
I6G26_09620 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnn03032
]
I6G26_09620 (ligA)
03400 DNA repair and recombination proteins [BR:
mnn03400
]
I6G26_09620 (ligA)
Enzymes [BR:
mnn01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
I6G26_09620 (ligA)
DNA replication proteins [BR:
mnn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
I6G26_09620 (ligA)
DNA repair and recombination proteins [BR:
mnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
I6G26_09620 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
I6G26_09620 (ligA)
MMR (mismatch excision repair)
DNA ligase
I6G26_09620 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I6G26_09620 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
DNA_ligase_ZBD
HHH
Nlig-Ia
PTCB-BRCT
HHH_3
5_3_exonuc
GFRP
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
QPT44301
UniProt:
A0A1B8QRU4
LinkDB
All DBs
Position
complement(1953879..1955948)
Genome browser
AA seq
689 aa
AA seq
DB search
MTDLFAPLSADMPANDKMAIIAQMRKLIRVLKHHNHAYYVLDHPTITDGEYDSLRAKLVQ
LENDFPTLKQQDSPTDNVGDTPLPFFTQVSHDLPMLSLANAFNADDVANFVRRVNERLDG
KNQNPEFEMELKLDGLAVSLKYINGVFSQALTRGDGQVGEDITHNVRTIYNLPLVLDDCQ
DIDLLEVRGEVLMPKAGFLKLNEQSRKRGERVFANPRNAAAGSLRQLNPAIAKSRPLAFY
GYSVNQGLPNAITTQSGAMRFLQAQGFDVSPFKVVANLQQIDDFYQETITKRDELPFEID
GMVVKLNSLALQDDLGFLSREPRWATAYKFPATTATTRLLDVEWQVGRTGQLTPVGKLEP
VNVGGVTVSNVTLHNFGEIERLGVMMGDIVSIHRAGEVIPKVSNVMENLRDDNVRAIHLP
NTCPVCDSPVVLPDGEALARCMGGLVCTAQAQEALIHFVSRKAMDIDGLGSQRLIKFFDM
QLIKTVADIYRLTDKAQVLQKLEGLGEKSVANMLFAIEKSKNTTLSRFIFALGIRGVGES
TARNLAEHFGRLDRLQNASVDELLKVVDIGKITAKNIHEFFRTKHNMEVVNDLMALGVHW
QAVVKNTANAPLDGQTWVITGTLEVMGRDEIKAHLHALGAKVVGSVSTKTSVLLAGDKAG
SKLNKADELGVRVVSESEFLALLAEYGRM
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttatttgcccctttatctgctgatatgcctgccaatgacaagatggcgatt
attgcccaaatgcgtaaactcatcagagtcctaaaacaccataatcacgcctattatgta
ctggatcatccaaccattacagatggtgagtatgacagtttgcgtgccaaattagtccag
ctggaaaatgactttcccacgctaaaacaacaagacagcccaaccgataacgtgggtgat
acgcctttgccattttttactcaggtcagtcatgatttgcccatgttatcgcttgctaat
gcctttaatgctgatgatgtggcaaattttgttcgccgtgttaatgagcgtttagatggc
aaaaaccaaaatcctgaatttgaaatggaacttaaattggacggtttggcggtatcttta
aaatacatcaatggtgtatttagtcaagcactcactcgtggagatgggcaggtgggtgag
gatattacgcacaacgttcgcaccatttataacctaccacttgtacttgatgactgtcaa
gacattgatcttttagaggtgcgtggcgaggtgttaatgccaaaagcaggatttttaaaa
ttaaacgaacaaagtcgtaaacgtggcgagagggtctttgccaaccccagaaacgcagca
gcagggtcattaagacagctaaatcctgccatcgccaaatcccgtccgctggctttttat
ggttattcggtcaatcaaggtctgcccaatgccatcacaacccaaagtggagcaatgcgt
tttttgcaggcacaggggtttgatgtatcgccctttaaagtggtggcaaacttacaacaa
attgatgacttttatcaagagaccattaccaaacgagatgagttgccctttgagattgat
ggcatggtggttaaattaaactcgcttgccttacaagatgatttggggtttttaagtcgt
gagccacgttgggcgactgcttacaaattccctgccacgaccgccacaacacgcctactg
gatgtagaatggcaagtgggacgtacagggcaactcacccctgtgggtaagcttgaacct
gtcaatgttgggggcgttaccgtgagtaacgttaccttgcataactttggcgagattgaa
cggcttggggtcatgatgggcgacattgtgagcattcacagagcaggggaggtaatcccc
aaagtgtccaatgtgatggaaaatttgcgtgatgataatgtacgtgcaatccatctgcca
aatacctgccctgtttgtgattcgcctgtggtgttgccagatggcgaagctttggcacgt
tgcatggggggactggtctgtaccgcccaagcccaagaagccttaatacattttgtttca
cgaaaagccatggatattgatggtttggggtcgcagcggctcattaagttttttgatatg
cagctgattaagaccgtggcagacatttatcgtttgacagataaagcacaggttttacaa
aaactagaaggtttgggtgaaaagtcggttgctaatatgctctttgccattgaaaaatcc
aaaaacacaaccttatcacgttttatttttgctttgggcattcgtggtgtgggcgagagt
acggcacgaaatttggctgagcattttggtcggttggacagattgcaaaatgccagtgtg
gatgaactgttaaaagtggtggatattggcaagattaccgccaaaaatatccatgagttt
tttcgcacaaagcataacatggaggtagttaatgatttgatggcattgggtgtgcattgg
caagcggttgtcaagaatacagctaatgccccacttgatggtcaaacatgggtgataaca
ggcacacttgaagtcatggggcgagatgagatcaaagctcatctacatgcgttgggggca
aaggttgtagggtcggtgtctaccaaaacaagtgtgctgctggctggggataaagcaggc
tctaagctgaacaaggcagatgagcttggtgtgcgtgtggtgagtgaaagcgagtttttg
gcattattggcagagtatggcaggatgtga
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