Mustela nigripes (black-footed ferret): 132000174
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Entry
132000174 CDS
T09425
Symbol
ABCD4
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp02010
ABC transporters
mnp04146
Peroxisome
mnp04977
Vitamin digestion and absorption
mnp04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132000174 (ABCD4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
132000174 (ABCD4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
132000174 (ABCD4)
04980 Cobalamin transport and metabolism
132000174 (ABCD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132000174 (ABCD4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mnp02000
]
132000174 (ABCD4)
Enzymes [BR:
mnp01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
132000174 (ABCD4)
Membrane trafficking [BR:
mnp04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
132000174 (ABCD4)
Transporters [BR:
mnp02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
132000174 (ABCD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
NACHT
Endonuclease_5
DEAD
CoV_E
Motif
Other DBs
NCBI-GeneID:
132000174
NCBI-ProteinID:
XP_059229735
LinkDB
All DBs
Position
13:130878978..130894980
Genome browser
AA seq
606 aa
AA seq
DB search
MAVPGTATGAGARPRLDLQFLQRFLQIQKVLFPSWSSQNALMFLTLLCVTLLKQLVIYQV
GLIPSQYYGVLGNKDLDGFKSLTFLAVVLIVLNSMLKSFDQFTCNLLYVSWRKDLTEHLH
RFYFRGRVYYTLNVLRDDVDNPDQRISQDVERFCRQLSSMASKLLISPFTLIYYTYQCFQ
STGWLGPVSIFGYFILGTLVNKMLMGPIVAQLVQQEKLEGDFRFKHMQIRVNAEPAAFFR
AGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGVNTFDYLGSILSYVVIAIPIFSGVYGD
LSPTELSTLVSKNAFVCIYLISCFSGLIDLSSTLSDVAGYTHRIGELQETLLDMSLRSRA
GEIPDESEWDTDRAPEWPVAEPADTAFLLERVSICAPASNKPLIKDLSLKISEGQSLLIR
GNTGTGKTSLLRVLGGLWASTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKE
IYPDSGSTDDERILRFLELAGLSSLVTRTEGLDQQVDWNWYDVLSPGEMQRLSFARLFYL
QPKYAVLDEATSALTEEVEGELYRVGQQLGMTFISVGHRRSLEKYHSLVLKLCGEGRWEL
TRIKAE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcccgggaacggcgaccggggctggcgccaggcccaggttagatctgcagttt
ctccagcggttcctacaaatacagaaggttttgtttccctcctggtcatcacagaatgcc
ttgatgttcctgaccctgttgtgcgtcaccctactgaaacaactggtgatctaccaggtc
ggcttgatccccagtcagtactatggggtcctgggaaacaaagacttggatgggtttaag
agcctgaccttcctggctgtggtgctcatcgttctcaactccatgctgaagagctttgac
cagttcacctgcaacctgctgtacgtgagctggaggaaggacctcaccgagcaccttcac
cgcttctacttccgaggccgcgtgtactacaccctcaacgtgctgcgggatgacgtcgat
aacccggaccagcgcatcagccaggacgtggaacgcttctgccggcagctcagcagcatg
gcgagcaagctcctcatctcccccttcactctcatctactacacctaccagtgcttccaa
agcacgggctggctcgggcctgtgagcatcttcgggtatttcatcctgggaaccctggtg
aacaaaatgttgatggggcccatcgtggcacagctggtgcagcaggagaagctggagggg
gattttaggttcaagcacatgcagatccgggtgaacgctgagcctgctgcctttttcagg
gctgggcatgtggagcacatgaggacagaccgcaggctgcagagactccttcagacccag
cgggagctgatgtccaaggagctctggctgtacatcggcgtcaacaccttcgactatctg
ggcagcatcctgagttatgttgtgatcgccatccctattttcagtggggtctacggagac
ctgagccccacggagctcagcactctggtcagcaagaacgccttcgtgtgcatttacctc
atcagctgcttcagcgggctcatcgacctctccagcacgctctccgatgtggctggttac
acacacaggatcggggagcttcaggagaccctgctggacatgtccctgaggtcgcgggct
ggcgagatcccggacgagagcgagtgggacacagacagggccccggagtggccagtcgca
gagccagcggacacagctttcctccttgagcgggtctccatctgcgccccggcctctaac
aagcccttaatcaaggatctgagcctgaagatctccgaggggcagagcctgctcatcagg
ggcaacacgggcacgggcaagacctccttgctccgggttctcggcggcctctgggcaagc
acaaggggctcggtgcagatgctgacggacttcggaccccatggggtgctgttcctgcca
caaaagccattcttcactgacgggacccttcgggaacaggtgatctacccgctgaaggaa
atctacccagactcgggttctactgatgatgagcggatcctgaggttcttggagttggca
ggcctgtccagtctggtgacgaggacagagggtctggaccagcaggtcgattggaactgg
tacgacgttctgtccccaggagagatgcagaggctctcctttgcccggctcttctaccta
cagcccaagtatgcagtgcttgatgaagccaccagtgccctgaccgaggaggtggagggc
gagctctaccgcgtcggccagcagctgggcatgacgttcatcagtgtggggcatcgccgt
agcctcgagaagtatcactccttggttctgaaactctgtggagaaggaagatgggaactg
accagaattaaggcggagtga
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