Mustela nigripes (black-footed ferret): 132003411
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Entry
132003411 CDS
T09425
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp00514
Other types of O-glycan biosynthesis
mnp04330
Notch signaling pathway
mnp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
132003411 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
132003411 (RFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
132003411 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
mnp01003
]
132003411 (RFNG)
Enzymes [BR:
mnp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
132003411 (RFNG)
Glycosyltransferases [BR:
mnp01003
]
Glycan extension
O-Glycan
132003411 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
132003411
NCBI-ProteinID:
XP_059234836
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All DBs
Position
16:892611..896568
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AA seq
352 aa
AA seq
DB search
MSRARGALCRACLALAAALAALLLLPLPLPRVPAPAPAPARAPSPSPGRRGSPARPASVP
RLRPDDVFIAVKTTQKNHGPRLGLLLSTWISRARQQLHSGPPGASQVVSPQTFIFTDGDD
PELQLRAGSHVINTNCSAVHTRQALCCKMAVEYDKFIESGRKWFCHVDDDNYVNPRGLLR
LLSAFSPSQDVYLGRPSLDHPIEAAERVPGGGTVTTVKFWFATGGAGFCLSRGLALKMSP
WASLGSFISTAERARLPDDCTVGYIVEGLLGARLLPSALFHSHLEDLRRLPPDAVLRQVT
LSYGGPENPHNVVNVGGFSLQQDPTRFKSVHCLLYPDTDWCPMHKQSDLVAR
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgcgcggggggcgctgtgccgggcctgcctcgcgctggccgcggccctggcc
gcgctactgctgctgcccctgccactgccccgcgtaccggcgccggcccccgcccctgcc
agggctcccagtccgagccccggccggcgggggtccccagcccgacccgcctccgtcccc
cgcctgcggccggacgacgtcttcatcgctgtcaagaccacccagaagaaccacgggcca
cgcctggggctgctgctgagcacctggatctcccgggcccgccagcagctccattcgggt
ccccctggggcctcacaggttgtctctccccagaccttcatcttcaccgacggggatgac
cctgaactgcaactccgggcaggcagccacgtcatcaacaccaactgctcggccgtgcac
acccgccaggccctgtgctgcaagatggccgtggaatacgacaagttcatcgagtccgga
cgcaagtggttctgccacgtggacgacgacaactacgtgaaccccagaggcctgctgcgg
ctgctctccgccttctcgcccagccaggatgtctacctgggccggcccagcctggaccac
cccatcgaggccgctgagagggtcccgggagggggcaccgtgaccaccgtcaagttctgg
ttcgccacgggcggagccggcttctgcctgagcagaggcctcgctctgaagatgagcccc
tgggccagcctgggcagcttcatcagcaccgccgagcgggcgcggctgccggatgactgc
accgtgggctacatcgtggaggggctgctgggcgcgcgcctgttgccgagcgcgctcttc
cactcgcacctggaggacctgcggaggctgccgcccgacgccgtgctgcggcaggtcacc
ttgagctacgggggtccagagaacccacataacgtggtgaacgtcgggggcttcagcctg
cagcaggaccccacacggttcaagtctgtccactgccttctctatccagacacggattgg
tgtccaatgcacaagcagagtgacctcgttgctcggtga
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