KEGG   Mustela nigripes (black-footed ferret): 132016770
Entry
132016770         CDS       T09425                                 
Symbol
SMNDC1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30 isoform X1
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
mnp  Mustela nigripes (black-footed ferret)
Pathway
mnp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132016770 (SMNDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mnp03041]
    132016770 (SMNDC1)
Spliceosome [BR:mnp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    132016770 (SMNDC1)
 Complex B
    132016770 (SMNDC1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    132016770 (SMNDC1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR TraX-like
Other DBs
NCBI-GeneID: 132016770
NCBI-ProteinID: XP_059254527
LinkDB
Position
4:complement(172697950..172710398)
AA seq 238 aa
MSEDLAKQLASYKAQLQQVEAALSGNGENEDLLKLKKDLQEVIELTKDLLSTQPSETLAS
SDSFASTQPTHSWKVGDKCMAIWSEDGQCYEAEIEEIDEENGTAAITFAGYGNAEVTPLL
NLKPVEEGRKAKEDSGNKPMSKKEMIAQQREYKKKKALKKAQRIKELEQEREDQKVKWQQ
FNNRAYSKNKKGQVKRSIFASPESVTGKVGVGTCGIADKPMTQYQDTSKYNVRHLMPQ
NT seq 717 nt   +upstreamnt  +downstreamnt
atgtcagaggatctagcaaagcagctggcaagctacaaagctcaactccagcaagtcgaa
gctgcattgtccggaaacggagaaaatgaagatttgctaaaattaaagaaagatttacaa
gaagttatagaactaaccaaagaccttctgtcaactcaaccttctgaaactcttgcaagt
tcagacagttttgcttctacccagcccactcattcatggaaagtgggagacaagtgtatg
gcaatctggagtgaagatggacagtgttacgaagcggagatcgaggagatagatgaagaa
aacggcaccgctgccatcacctttgctggctacggcaatgcggaagtgaccccgctgttg
aacctcaagcctgtagaagaaggaaggaaggcaaaggaggacagtggcaataaacccatg
tcaaaaaaagaaatgattgcccagcagcgtgaatataaaaagaagaaagctttgaaaaaa
gcacagagaataaaagaacttgagcaggaaagagaggaccagaaggttaaatggcaacag
ttcaacaacagagcctattctaaaaacaaaaaaggccaggtaaaaaggagtatttttgct
tcacctgagagtgtaaccggaaaagttggagtaggaacttgtggaattgctgataaacct
atgacacaatatcaagatacctctaaatacaatgtcaggcatttgatgcctcaataa

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