Mustela nigripes (black-footed ferret): 132019306
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Entry
132019306 CDS
T09425
Symbol
TDG
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132019306 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132019306 (TDG)
Enzymes [BR:
mnp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
132019306 (TDG)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132019306 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
132019306
NCBI-ProteinID:
XP_059258197
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All DBs
Position
6:complement(17587210..17612694)
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AA seq
406 aa
AA seq
DB search
MEAENAGSYSLQQAQAFYTFPFQHMMAEAPDGAVVSEQHMPAEVPDPAPAQEPVQETPKG
RKRKPRATEPKKPVEPKKPAEAKKSGKSTKSKEKQEKITDTFKVKRKVDRFNGVSEAELL
TKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHT
LPGKYGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSK
EVFGVKVKNLEFGLQPHKIPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLK
GIERNTDVQEVQYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGAYTENPCAGDPCSFSS
GGLADSAESTFGDIPNGQWMTQSFTDQIPSFNNHCGTAEQEEGSHA
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagcggagaacgcgggcagctattcccttcagcaagctcaagctttttatacgttc
ccatttcaacacatgatggctgaagctcctgatggggccgtggtgagcgaacagcacatg
ccagcagaagttccagaccccgctcctgctcaggaacctgtgcaagagactccaaaagga
aggaaaagaaaacccagagcaacagaaccaaaaaaaccagtagaacccaaaaagcctgct
gaggccaaaaaatctggcaagtccacaaaatcaaaagaaaagcaagaaaaaattacagac
acatttaaagtgaaaagaaaagtagaccgttttaatggtgtttcagaagctgaacttcta
accaagaccctcccagacattttgaccttcaacctggacattgtgattattggcataaac
ccaggactaatggcagcttacaaagggcatcattaccctggacctggaaaccatttttgg
aagtgtctgtttatgtccggcctgagtgaggtccagctgaaccatatggatgatcacact
ttaccggggaaatacggtattggatttaccaatatggtggaaaggacaacaccaggcagc
aaagatctctccagtaaagaatttcgtgaaggaggacgtattctagtgcagaaattacag
aaatatcagccacgaatagcagtgtttaatggaaaatgtatttatgaaatttttagtaaa
gaagtttttggagttaaggttaaaaacttagaatttggacttcagccccataagatccca
gacacagaaactctctgctacgttatgccgtcatccagtgcgagatgtgctcaatttcct
cgagcccaggacaaagttcattactacattaagctcaaagacttgagagatcaattgaaa
ggcattgaacgaaacacagacgttcaagaggtgcagtatacatttgatctgcagctggcc
caagaggatgcaaagaagatggctgttaaggaagaaaaatacgacccaggttatgaagca
gcgtatggcggtgcttatacagaaaatccgtgcgctggcgacccctgcagcttctcctcc
ggggggctagctgacagtgcagaatcaactttcggtgacattccaaatgggcagtggatg
actcagtcgtttacagaccagattccttcctttaacaatcattgtgggacggcagaacag
gaagaaggaagccacgcttaa
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