Morus notabilis: 21389622
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Entry
21389622 CDS
T07292
Name
(RefSeq) 5'-3' exoribonuclease 4
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
mnt
Morus notabilis
Pathway
mnt04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
21389622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnt03019
]
21389622
Messenger RNA biogenesis [BR:
mnt03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
21389622
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
21389622
NCBI-ProteinID:
XP_010090276
UniProt:
W9QSW6
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MGVPAFYRWLADRYPLSISDVVEEEPKEDSNGIPMPIDVSKPNPNGLEFDNLYLDMNGLI
HPCFHPEGKPAPATYNDVFKSIFEYIDHLFSLVRPRKLLYLAIDGVAPRAKMNQQRSRRF
RAAKDAAEAAAEEERLKKEFEDEERNLTLTEKSETSDSNVITPGTQFMAVLSVALQYYIQ
SRLNRNPGWRSTKVILSDSNVPGEGEHKIMTYIRLQRNLPGFDPNTRHCLYGLDADLIML
SLATHEIHFSILRELITLPGQQEKCFVCGQIGHLAAECRGKPDDPLDWNVVDETPIHKRK
YQFLNIWVLREYLQYELDIPDPPFDIDFERVVDDFVLLCFFVGNDFLPHMPTLEIREGAI
NLLMHVYRREFAAMGGYLTDAGEVLLDRVEHFIQSVAVYEDQIFQKRARIQQAIENNGEM
RRAKREANGEQQTLVVEKAPVVDKVKLGEPGYKERYYAEKFGVSTPEKIDEVRKDTVLKY
VEGLCWVCQYYYQGVCSWKWYYPYHYAPFASDLKDLMELEITFFIGEPFKPFEQLMGTLP
AASSSALPEKYRNLMTDPSSPIYAFYPPDVEIDMNGKRFSWQGVAKLPFIDERKLLGAIR
KLESTLTEEEQIRNSVMNDLFYVHRAHPLASQIYIYYQLNHRMPQFTRVPCAIDTNASGG
MNGYLWLCERSWMRNVVPSPISGFQDIEHNQVLTIAYLNPAAHRHIPKPPNGVFMPEKIL
NPIDIKPFPVLWHEDNSRRNQYRERQQVSGAITGPQLGEAAHRLVKNSLNLKSNDSHSGL
WEQPPSRNFPGSYPVTRSRPAGPSGYERGFRQDPNAYCDNYFTPQGHMGRPRFPVSNGTQ
NFRTPDRTHNQEQHRNMRAGMSALTMEDNVRARSPALMSPRMPNSGNSSNTFRQFLQNTG
ALPAPPPKWIDKAVTANGGMYTGRQETILHDRQAKKAYQIKTQTPPDSMNHGEQERL
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgccggcgttctaccgttggctggccgatcggtacccgctctcgatttccgat
gtcgtcgaggaagagcccaaggaggactccaatggcatccccatgcccatcgacgtttcc
aaacctaatcccaacggcttggagttcgacaatctctacctcgacatgaacggccttatt
catccttgttttcaccccgagggcaagcccgctccagctacctacaatgatgtattcaaa
tctatatttgaatacattgaccatctcttctcattggttcgcccaagaaagcttctttat
ctggcaattgatggtgttgctccaagagctaaaatgaatcagcaacgttctcgacgcttt
agagccgctaaagacgctgcggaagcagcagctgaggaagaaagattgaagaaagaattt
gaggacgaggagagaaacttgacactcacagagaagtctgaaacttccgactcgaatgtt
attactcctggaactcagtttatggcagtgctctcggtggcacttcagtattacattcaa
agtaggttgaatcgcaaccctggctggcggtctacaaaggttattctttctgattcaaat
gttcctggtgagggagaacacaaaattatgacatacattcgattgcaacgtaaccttcct
ggttttgatcctaatactcggcattgtctgtatggtctggatgcggatctcattatgttg
tctttagctacgcatgaaattcatttctcaatactacgagagttgattactctgcctggg
cagcaagaaaagtgttttgtctgcggtcagattggtcatctggcagctgagtgtcgtggt
aaaccggatgacccgttagattggaatgtggtagatgaaactccaattcacaagaggaaa
tatcagttcctcaacatctgggtattgcgagaatatttgcaatatgagctggacattccc
gaccctccatttgatattgattttgaacgagtagtggatgattttgtcctcctttgtttt
tttgtcggcaatgactttcttccacatatgcctacattagagatcagggagggtgccatt
aatttattgatgcatgtttatcgaagagagtttgctgctatgggtggttatcttactgat
gcgggtgaggtgttgttagacagagtagagcactttattcagtcagtggctgtttatgaa
gaccagatctttcagaagcgggctcgaattcagcaggccatcgagaataatggggagatg
agaagagccaaaagagaggcaaacggggagcaacagactctggtggtagagaaggctcca
gtggtagacaaggttaagctgggggaacctggatacaaagaaaggtattatgctgagaaa
tttggtgtatcaacgcctgagaagatcgatgaagttaggaaagacacagttctgaaatat
gtagaaggcttatgttgggtttgtcagtactactaccaaggtgtttgctcatggaaatgg
tattatccataccattatgccccatttgcttccgatctgaaagatctgatggaactggaa
ataacatttttcattggtgagccattcaaaccctttgaacagcttatgggaactttgcca
gctgctagttcaagtgctctaccagagaaatacagaaacttgatgactgatccatcatca
cctatttatgcgttctaccctcctgatgttgagattgacatgaacggcaagcgtttttca
tggcagggtgttgccaaattgccattcattgatgagaggaagttgcttggagcaataagg
aagcttgaaagcaccttaacggaggaagagcagatacgaaatagtgtgatgaatgatttg
ttttatgttcatcgtgcacatcctttggcttcacaaatctacatatactaccaacttaat
catcggatgccccaattcacaagagttccttgtgcgattgacacaaatgctagtggtgga
atgaatggatacctttggttatgcgagaggagttggatgagaaatgtagtcccgtcccct
atcagtggatttcaggacatcgagcataaccaagtcttaactattgcatatcttaacccc
gctgcacatagacacatcccaaaacctcccaatggtgtgttcatgcccgaaaagatttta
aatccaatagatattaaaccattccctgtgttatggcatgaagacaattcccggcgcaac
caatatagggaaagacaacaagtgtctggagcaataactggccctcagttgggagaagcc
gcacatcgtcttgtcaagaactccctaaatctcaaatccaatgattcacactctggattg
tgggagcagccaccatctagaaatttcccaggctcctatccagtaactagatcaagacca
gctggaccttctggatatgaaagaggcttccggcaagatccaaatgcttactgtgacaat
tatttcactcctcagggccacatgggtaggcctagatttccagtctcgaatggtacgcag
aattttaggacaccagatagaacacataatcaagaacagcaccgcaacatgagagccggg
atgtctgctttgacaatggaagacaatgtgagagccagatcacctgccttgatgtcgcct
agaatgccaaattcgggaaactcatcaaacacgttccgccagtttttgcagaacacaggt
gcacttccagcaccccctcccaagtggattgacaaagctgtgactgcgaatggcgggatg
tatactgggcgacaggaaaccatcttacatgataggcaggcaaagaaggcttatcagatt
aagacacaaactccgccagattcaatgaatcatggagagcaggagcgtttgtag
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