Morus notabilis: 21393265
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Entry
21393265 CDS
T07292
Name
(RefSeq) LOW QUALITY PROTEIN: 110 kDa U5 small nuclear ribonucleoprotein component CLO
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
mnt
Morus notabilis
Pathway
mnt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mnt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
21393265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnt03041
]
21393265
Spliceosome [BR:
mnt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
21393265
Complex C
U5 SnRNP specific factors
21393265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFL1
EFG_III
MMR_HSR1
Roc
EF-G_D2
Septin
Ras
Motif
Other DBs
NCBI-GeneID:
21393265
NCBI-ProteinID:
XP_010099513
UniProt:
W9RZ27
LinkDB
All DBs
Position
Unknown
AA seq
991 aa
AA seq
DB search
MDDSLYDEFGNYIGPEIESDQESDRDEEDENLPDRPGDEAVASDGDRGEEAPAASDGWLT
ASNDVDMDNQIVLAEDKKYYPTAEELYGEDVETLVMDEDEQPLEQPIIKPVRNIKFEVGV
KDSSTYVSTQFLVGLMSNPSLVRNVALVGHLQHGKTVFMDMLVEQTHHMSTFDPNSEKHM
RYTDTRIDEQERRISIKAVPMTLVLEDSNSKSYLCNIMDTPGHVNFSDEMTASLRLADGA
VLIVDAAEGVMVNTERAIRHAIQERLPIVVVINKVDRLITELKLPPRDAYFKLRHTLEVI
NNHISAASSTAGDVQIIDPAAGNVCFASATAGWSFTLQSFAKLYVKLHGIPFDADKFASR
LWGDMYYHPDARAFRKKPPPNGGERSFVQFVLDPLYKIYSQVIGEHKKSVEATLAEFGVT
LSNAVYKLNVRPLLRLACSSVFGSASGFTDMLVRHIPSPKEAATRKVDHTYTGPKDSLIY
KAMKDCDPSGPLMVNVTKLYPKSDCSVFDAFGRVYSGRIQTGQTVRVLGEGYSPEDEEDM
TVKEVTKLWVYQARDRIPIAEAPPGTWVLIEGVDASIMKTATLCSEYYDEDVYIFRPLQF
NTLSVVKTATEPLNPSELPKMVEGLRKISKSYPLAITKVEESGEHTILGTGELYLDSIMK
DLRELYSEVEVKVADPVVSFCETVVESSSMKCFAETPNKKNKITMIAEPLERGLAEDIEN
GVVSLDWPRKDIGNFFQTRYEWDVLAARSIWAFGPDKQGPNILLDDTLSTEVDKGLLNAC
KDSIVQGFQWGAREGPLCDEPIRNVKFKIVDAKIAPEPLHRGSGQIIPTARRVAYSSFLM
ATPRLMEPVYYVEIQTPIDCVSAIYTVLSRRRGHVTADVPQPGTPAYIVKAFLPVIESFG
FETDLRYHTQGQAFCLSVFDHWAIVPGDPLDKSIVLRPLEPAPIQHLAREFMVKTRRRKG
MSEDVSINKFFDEAMMVELAQQAADLHQQMI
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atggatgatagtctttacgatgagttcggaaactatataggacctgagattgagtctgac
caagagagtgatagggatgaggaagatgagaatcttccagataggcccggggatgaggcg
gtggcatccgatggtgatcgtggagaggaggcgcctgccgcttccgacgggtggttaaca
gcctccaacgatgtcgatatggataatcagattgtccttgctgaggacaaaaagtactac
cctactgcggaagagctttatggtgaagatgttgagacattggttatggatgaagatgag
caaccacttgagcagcccattatcaaacctgttagaaatattaagtttgaggttggggtt
aaggattcgtcgacttatgtgtccacgcaattccttgttggtttaatgtcgaaccctagt
ctggtacggaatgttgcacttgtggggcatttgcagcatgggaagactgtcttcatggat
atgctagttgagcaaactcaccatatgtcgacttttgatccaaatagtgagaagcatatg
agatacacagatacaaggattgatgagcaagagaggaggatatcaatcaaagcagttcca
atgactcttgtacttgaggatagcaattcaaaatcctacctctgtaatatcatggatacc
cctggtcatgtcaatttctctgatgaaatgactgcctccttgaggcttgctgacggtgcc
gtgttgattgtggatgctgcagaaggagttatggttaatacagagagggctatacgtcat
gcaatccaagagcgcctccccattgttgttgtaatcaataaggttgacaggttgattaca
gaacttaaactgccacctagggatgcttattttaagctaagacatactctggaagttatc
aataaccacatatctgcggcctcgtctactgctggtgatgtccagattattgatccagct
gctggaaatgtttgcttcgcaagtgctactgcaggatggtcgtttactttgcaatccttt
gctaaattgtatgtgaaactccatggaatccctttcgacgctgataagtttgcttctcgt
ctttggggagatatgtattatcatccagatgcgagggctttcaggaaaaaacctcctcca
aatgggggagaaagatcgtttgtccagtttgtacttgaccccctttataaaatatatagc
caggtgattggtgaacataagaagagcgtggaggcaactcttgcagaatttggtgttact
cttagcaatgcagtgtacaaattgaatgtaagacctttgctgaggcttgcttgtagctct
gtctttggttcagcctcgggctttactgacatgttggttcgtcatattccttcccccaag
gaagctgcaactaggaaggttgaccatacatatacggggccaaaagattctctaatatat
aaggccatgaaagattgtgatccttctggccctctaatggtaaatgtgacaaaactgtat
cccaagtccgactgtagtgtgtttgatgcctttggtagggtttacagtggcaggattcag
actggacagactgtacgggtattgggagaaggatattcaccagaggatgaggaggacatg
acagttaaagaagtaacaaaattatgggtatatcaagctcgagacaggataccaatagct
gaggctcctcctggtacttgggttctcattgaaggagtggatgcttccatcatgaaaact
gccactctctgcagcgagtattatgatgaggatgtgtacatattcaggcctcttcaattc
aatactctttcggttgtgaaaacagctactgaaccactaaatcctagtgagctgccaaaa
atggtcgagggccttagaaagatcagcaagagctatcctctggccatcactaaagttgag
gaatctggggagcacactattttaggtacaggagagctctacttggattctatcatgaag
gatctgagagagctttattcagaagtagaagtgaaggtggcagatcctgttgtttcgttc
tgtgaaacagtggtggagtcctcttcaatgaaatgttttgcagaaacacccaacaagaag
aataaaataaccatgattgcggagccactggagagaggacttgcagaggacatagagaat
ggtgttgttagccttgattggccgcggaaggatattggtaactttttccagacaagatat
gaatgggatgtgcttgctgcacggtccatatgggcgtttggtcctgataagcagggccct
aacattctattagatgacacactttcaactgaagttgacaaaggcttgctgaatgcttgc
aaggattctatcgtccaaggatttcaatggggtgctcgagaaggacctctttgtgatgag
cccatcagaaatgtgaagttcaaaattgttgatgcaaaaattgcacctgagccattgcac
cgtggatctggtcagatcattcccacagctcgtcgagtggcctattcatcatttcttatg
gcaaccccaaggcttatggaacctgtatattatgtggagatccaaacaccaattgactgt
gtctctgcaatttacaccgttttatctcgaagacgtggacatgttacagctgatgttcct
caaccggggactccagcttatatcgtcaaggcattcttgcctgtaatagagtcatttggg
ttcgagacggacttaagataccatacccaaggacaagccttttgcctttcagtttttgat
cactgggctatagttcctggggatccccttgacaagagtatcgttctgcggccacttgaa
ccagcacctattcagcaccttgctcgtgagtttatggtaaagacaaggcgtagaaaggga
atgagtgaggacgtgagcatcaacaaattttttgacgaggcaatgatggttgagctggct
cagcaagcagctgatctccaccagcaaatgatatga
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