Mesomycoplasma neurolyticum: NCTC10166_00112
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Entry
NCTC10166_00112 CDS
T06888
Symbol
lig
Name
(GenBank) NAD(+)-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mnu
Mesomycoplasma neurolyticum
Pathway
mnu03030
DNA replication
mnu03410
Base excision repair
mnu03420
Nucleotide excision repair
mnu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10166_00112 (lig)
03410 Base excision repair
NCTC10166_00112 (lig)
03420 Nucleotide excision repair
NCTC10166_00112 (lig)
03430 Mismatch repair
NCTC10166_00112 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnu03032
]
NCTC10166_00112 (lig)
03400 DNA repair and recombination proteins [BR:
mnu03400
]
NCTC10166_00112 (lig)
Enzymes [BR:
mnu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NCTC10166_00112 (lig)
DNA replication proteins [BR:
mnu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC10166_00112 (lig)
DNA repair and recombination proteins [BR:
mnu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NCTC10166_00112 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10166_00112 (lig)
MMR (mismatch excision repair)
DNA ligase
NCTC10166_00112 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC10166_00112 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_2
PTCB-BRCT
BRCT_2
HHH_5
Nlig-Ia
RNA_ligase
RNA_pol_A_CTD
Zn_ribbon_IFT122_C
Motif
Other DBs
NCBI-ProteinID:
VEU59157
UniProt:
A0A449A4J2
LinkDB
All DBs
Position
1:126094..128076
Genome browser
AA seq
660 aa
AA seq
DB search
MKENEQKIKEKIVDLRKKIIYHDSLYFEKNISEISDYEYDKLFKLLQKLEHNYYYLFSQE
ENDNSPTQRVAPLNISVFKKEKHSQSMLSLNKAYSFEELEKFSNDAQAMKQDGNIEFYIE
PKIDGMSIAIYYENGNLIKALTRGNGIEGEDITENVLKMSSNFINKKINYMLPLEIRGEI
FLSKTDFEKLKSKSNNILANPRNATAGILRRKKDLNNEISYLSAFFYQVINPFSHNLLTH
DKTIDFLKENNFSVNDLGLKTKSISKAYKHIEKIMNLKNTLDYEIDGCVVKINDFDLFNK
LGVTSKFPKGAIAFKFYDEIVNTKLIGIDYQIGRTGKLAYIAKLEPVILNGTKVSKAYLH
NYQNIINLKINLNEEVQIKKAGEIIPQVIGTTKKFSESNIEILVNCPFCGQKIHTTDKEQ
FCLNENCIPIILNKILHFFSKEAINVETLSKKTVESLYKNKIIFSAYDIFNLKNKLKELS
EIGFRQKSAQKLLKAIEVSKKTTIAKFIYGLGIKNVGLRNAKLLANEINTIDEFINYDYN
KLLNIKNLGPIIVEQIQLYLKNENNISFLNKLKNIDFIFEQKQQNNNLIFKDKVFVITGT
LTKPRNYFKKIIEENGGKISSSISANTNYLLLGENPGSKYTKAKELKINILTEEDFLKLL
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaatgagcaaaaaataaaagaaaagatagttgatttaagaaaaaaaattatc
tatcatgattcgttatattttgaaaaaaacatttctgaaatttcagattatgaatatgac
aaactttttaagttattacaaaaacttgaacataattattactatctttttagtcaagaa
gaaaatgataattcacctactcaaagagttgctccattaaatatcagtgtttttaaaaaa
gaaaaacatagtcaatcaatgttatctttgaataaagcttattcatttgaagagttagaa
aaattttcaaatgatgctcaagcaatgaaacaagatggaaatattgaattttatatagaa
cctaaaattgatggaatgtcaattgctatttattatgaaaatggtaatttaataaaagca
ttaacaagaggtaatgggattgaaggtgaagatataacagaaaatgttttaaaaatgtct
tcaaattttataaataaaaaaattaactatatgctaccacttgaaataaggggcgaaatt
tttttgtccaaaactgattttgaaaaattaaaatctaaatcaaacaatattttagccaat
ccaagaaatgcaactgcaggaattttaagaagaaaaaaagatttaaataatgaaattagt
tatttgagtgcttttttttatcaagttattaatcctttttctcataatcttttaactcat
gataaaactattgattttttaaaagaaaacaacttttcagttaatgatttaggtcttaaa
actaaaagtatttcaaaagcatataaacatattgaaaagattatgaatttaaaaaatact
cttgactatgaaatagatggttgtgtagtaaaaataaatgattttgatttatttaataaa
ttaggtgtaacttctaaatttccaaaaggagcaattgcttttaaattttatgatgaaatt
gtaaatactaaattaataggtattgattatcaaattggaagaacaggaaaattagcgtat
attgcaaaacttgaacctgttattctgaatggtacaaaggtttcgaaagcttatttgcat
aattatcaaaatattattaatctaaaaataaatctaaatgaagaagtgcaaataaaaaaa
gctggagaaataataccacaagtcattggtacaactaaaaaatttagtgaaagtaacata
gaaattttagttaactgtccattttgtggacaaaaaattcatactaccgataaggagcaa
ttttgtttaaatgaaaattgcattcctattattttaaataaaatattacattttttttca
aaagaagcaataaatgttgagacattatctaaaaaaacagttgaatctttatataaaaat
aaaataattttttcagcttatgatatttttaatttgaaaaacaaattaaaagaattaagt
gaaataggctttaggcaaaaatcagcacaaaaacttttaaaagcaatcgaagtttcaaaa
aaaacaacaattgcaaaatttatctatggtttaggaataaaaaatgttggtttaagaaat
gctaagcttttagctaatgaaataaacactattgatgagtttattaattatgattataat
aaattgttaaatataaaaaatttaggaccaattattgttgaacaaatccaactttattta
aaaaatgaaaataatatttcttttttaaataaattaaaaaatattgattttatttttgag
caaaaacaacaaaacaataatttaatttttaaagataaagtctttgttattacaggaaca
ttaactaaaccgagaaattattttaaaaaaataattgaagaaaatggaggaaaaatttct
tctagtattagtgccaacactaattatttattattaggagaaaacccaggtagtaaatat
acaaaagcaaaagaattaaaaataaacattcttactgaagaagattttctaaaattatta
taa
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