Mycobacterium noviomagense: MNVI_31040
Help
Entry
MNVI_31040 CDS
T06809
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
mnv
Mycobacterium noviomagense
Pathway
mnv03030
DNA replication
mnv03410
Base excision repair
mnv03420
Nucleotide excision repair
mnv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mnv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MNVI_31040 (ligA)
03410 Base excision repair
MNVI_31040 (ligA)
03420 Nucleotide excision repair
MNVI_31040 (ligA)
03430 Mismatch repair
MNVI_31040 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnv03032
]
MNVI_31040 (ligA)
03400 DNA repair and recombination proteins [BR:
mnv03400
]
MNVI_31040 (ligA)
Enzymes [BR:
mnv01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MNVI_31040 (ligA)
DNA replication proteins [BR:
mnv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MNVI_31040 (ligA)
DNA repair and recombination proteins [BR:
mnv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MNVI_31040 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MNVI_31040 (ligA)
MMR (mismatch excision repair)
DNA ligase
MNVI_31040 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MNVI_31040 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
HHH_5
Nlig-Ia
PTCB-BRCT
HHH
UPF0758_N
BRCT_2
Motif
Other DBs
NCBI-ProteinID:
BBY07786
UniProt:
A0A7I7PGU3
LinkDB
All DBs
Position
3260286..3262370
Genome browser
AA seq
694 aa
AA seq
DB search
MSSAEADSVAPEVRRQWQELADEVREHQFRYYVRDAPIISDAEFDKLFGQLVALEDRYPE
LRKPDSPTQLVGGAGFATDFMPAEHLERMLSLDNAFSEEELAAWAARIRAEVGDEAHYLC
ELKIDGVALSLVYRGGRLTRAATRGDGRTGEDVTLNARTIDDVPERLTASDDFPIPAVLE
VRGEVFFRLADFEALNAALVADGKSPFANPRNSAAGSLRQKDPAVTARRKLRMICHGVGH
TEGFRPATLHEAYLALAAWGLPVSEHTKRVDDLAGVQQQIGYWGEHRHDVDHEIDGIVVK
VDEVALQRRLGSTSRAPRWAIAYKYPPEEAQTKLLDIRVNVGRTGRVTPFAFMTPVKVAG
STVGLATLHNASEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDLRDGSEREFVMPTTCPE
CGTTLAPAKEGDADIRCPNARSCPAQLRERVFHVASRGALDIEGLGYEAGVALLQAKVIA
DEGDLFSLTEDDLLRTELFRTKAGALSANGKRLLANLHEAKSRPLWRVLVALSIRHVGPT
AARALATEFGSLDAIMSASTEQLAAVEGVGPTIAAAVTEWFTVDWHRAIVEKWRAAGVRM
ADERDTSVPRTLEGLTIVVTGSLTGFSRDDAKEAIVARGGKAAGSVSKKTDYVVAGDSPG
SKHDKAVELGVPILDEDGFRKLLAKGPAGVSAAQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcggcagaggctgattcggtcgcaccggaggttcggcggcagtggcaggaactg
gccgacgaagtccgcgaacaccagttccgctactacgtgcgcgacgcgccgatcatctcc
gatgctgagttcgacaaactgttcggccagctcgtcgcgctcgaagaccgataccccgag
ctgcgcaaacccgattcgcccacccagctcgtcggtggtgcgggttttgccaccgacttc
atgccggccgaacatctcgagcggatgctcagcttggacaacgcgttcagcgaggaggaa
ctcgccgcctgggccgcccggatccgcgctgaagtcggcgacgaggcgcactacctgtgc
gaactcaagatcgacggggtggcgctgtcgctggtgtaccgcggcggccggctcactcgg
gcggccactcgcggagacggccgcaccggtgaggacgtcacgctgaacgcccgcacgatc
gacgacgtgcccgagcgactcacggccagcgacgacttcccgataccggcggtgctcgag
gtgcgcggcgaggtgtttttccggctggccgacttcgaggcgctcaacgccgctttggtc
gccgacggcaaatcgccgttcgccaacccgcgcaacagcgctgcgggatcgcttcggcaa
aaggatccggcggtgaccgcacgccgcaagttgcggatgatctgtcacggggtagggcac
accgaagggttccgcccggccaccttgcacgaggcgtacctggcgttggctgcctggggt
ctgccggtttccgagcacaccaaacgcgtcgatgatttggccggcgtgcagcagcagatc
gggtactggggtgagcaccgccacgacgtcgaccacgaaatcgacggtatcgtcgtcaaa
gtcgacgaggtcgccctgcagcgcaggctgggttcgacatcgcgggcgccgcggtgggcg
atcgcctacaaatatccgcccgaggaggcgcagaccaaactgctggacatccgggtcaat
gtcggtcgcaccgggcgggttacgccgttcgcgttcatgacaccggtcaaggtcgccggc
tccaccgtcgggctggccaccctgcacaacgcttcggaagtcaaacgcaagggcgtgctg
atcggcgacaccgtggtgatccgcaaggccggggacgtgatccccgaggtgctgggtccc
gtcgtcgacctgcgcgacggctcggaacgcgaattcgtcatgcccacaacgtgtcccgag
tgcggcaccacgctggcgccggccaaggagggcgacgccgacatccgttgtcccaatgct
cgatcgtgcccggcgcagttgcgggagcgcgtttttcacgtcgccagccgcggagcactg
gacatcgaggggctgggatacgaggccggtgtcgcgctgctgcaggcgaaggtcatcgca
gacgagggcgatctgttcagcctcaccgaagacgacctgttgcgcacggagcttttccgg
acgaaagccggtgcgctctcggccaacggcaagaggctgttggccaacctgcacgaggcg
aaatcccggccgctgtggcgggtgctggtggcgctgtcgatccgccacgtggggccgacg
gcggcacgggcgctggctaccgagttcggcagcctcgacgcgatcatgtcggcgtcgacc
gagcagttggcggcggtggagggcgtcgggcccacaatcgccgccgcagtcaccgagtgg
ttcaccgtcgactggcatcgcgcgatcgtcgagaagtggcgggcggcgggcgtgcggatg
gccgacgagcgcgacaccagcgtgccgcgcacgttggaggggctgaccatcgtggttacc
ggatcgctgaccggcttctcgcgcgacgacgccaaggaggccatcgtggcccgcggcggc
aaggcggccggttcggtgtcgaagaaaaccgactacgtggtcgctggtgattcgcccggc
tcgaaacacgacaaggccgtcgagctgggtgtgccgattctcgacgaggacgggttccgc
aagcttctggccaaggggccggccggtgtttcagccgcgcagtag
DBGET
integrated database retrieval system
