Macrobrachium nipponense (oriental river prawn): 135202188
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Entry
135202188 CDS
T09903
Name
(RefSeq) RING-box protein 1A
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz03420
Nucleotide excision repair
mnz04120
Ubiquitin mediated proteolysis
mnz04141
Protein processing in endoplasmic reticulum
mnz04310
Wnt signaling pathway
mnz04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135202188
04120 Ubiquitin mediated proteolysis
135202188
09124 Replication and repair
03420 Nucleotide excision repair
135202188
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
135202188
04350 TGF-beta signaling pathway
135202188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnz04121
]
135202188
03400 DNA repair and recombination proteins [BR:
mnz03400
]
135202188
Enzymes [BR:
mnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
135202188
Ubiquitin system [BR:
mnz04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
135202188
Multi subunit type E3
SCF complex
Ring finger protein
135202188
Cul2 complex
135202188
Cul3 complex
135202188
Cul4 complex
135202188
Cul7 complex
135202188
Cul8 complex
135202188
Cul9 complex
135202188
DNA repair and recombination proteins [BR:
mnz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
135202188
TCR (transcription coupled repair) factors
Cul4-CSA complex
135202188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
135202188
NCBI-ProteinID:
XP_064087517
LinkDB
All DBs
Position
23:complement(81797689..81835797)
Genome browser
AA seq
114 aa
AA seq
DB search
MSAMEVDPQEEEVEVPSSSTSKADKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCI
ECQANQASVTSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgatggaggtcgatccacaggaagaagaggtcgaggtaccttcctcaagcaca
tccaaagccgacaagaagagattcgaagtgaaaaagtggaatgcagtagctttatgggca
tgggacattgtcgtagacaactgtgccatttgtcgtaatcatatcatggatttatgtatt
gaatgccaggcaaatcaagcctctgttacatcagaagagtgcactgttgcctggggggtg
tgtaatcatgcatttcacttccattgcatttcgaggtggctgaaaacacgtcaagtatgt
ccactagataaccgagaatgggaattccagaagtatggccattaa
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