Macrobrachium nipponense (oriental river prawn): 135207206
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Entry
135207206 CDS
T09903
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04120
Ubiquitin mediated proteolysis
mnz04140
Autophagy - animal
mnz04144
Endocytosis
mnz04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
135207206
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
135207206
04140 Autophagy - animal
135207206
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135207206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135207206
04121 Ubiquitin system [BR:
mnz04121
]
135207206
Enzymes [BR:
mnz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
135207206
Membrane trafficking [BR:
mnz04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
135207206
Ubiquitin system [BR:
mnz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
135207206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_5
RING_XB3-XBAT31
Sina_ZnF
zf-RING_6
zf-TRAF_2
zf-RING_11
zf_UBZ
Motif
Other DBs
NCBI-GeneID:
135207206
NCBI-ProteinID:
XP_064094878
LinkDB
All DBs
Position
32:complement(9113617..9167989)
Genome browser
AA seq
564 aa
AA seq
DB search
MEGSDGSSITLISRQEGFDYDFVPPLDSKYECAICLLGLRSPMQTTCGHRFCKDCIFNCL
SESSSRCPVDNTPLLESDLFADSCAEREILQLKVKCPNHALGCSTVVDLMYIEHHTQACS
CQPVMCPNECSATVLQKELEQHLTSQCILRVTRCALCDQPFTFNQEQLHLLSCSRVTVTC
EMCGAMMPRGEVPSHTTESCPRVVVACSYAEHGCHHKMTRSDLDQHNEQAIQYHLQLLSS
AHKKMNAFVSDLSRTVGLIQSPYGNFSRQPSLRSQMSATSPIPENHSSPSQHDRNLEKSF
GAYGGTVSLNDRSSLTPQSDEFGNEINKLELQLNNLSASETKSGSKIPNTVTHQEIILRD
VSEKTVDLNQRMLEETIKLSNLSKRIEEVDAMVEVQLADVTGKFCNGEYVWKIKHFSHLC
TELQNKPGRVLHSPAFYTSQFGYKFCLRTNITWKSNEYFFTLFIHSMQGENDDFLEWPFS
GEITLSILDCGPNVPKKHITESMVSKPDLQAFQRPVVSRNPKGFGYTEFVPLAKLLKSQG
GSYINSDVLCIRAVVSPKAPKSSS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctcagatggaagttcgataactctgatatctaggcaagaggggtttgattac
gacttcgtgccccccttagatagcaagtatgagtgtgccatatgtctccttggcctcaga
tctccaatgcagacaacctgtgggcaccgattttgtaaagactgcatcttcaattgttta
agtgagagtagcagtcggtgtcctgttgacaatacgccactattggagagtgacttgttt
gcagattcttgtgctgaaagggagatactacagcttaaagtaaagtgtccaaaccatgca
cttggatgttcaacagttgtggatctcatgtacatagaacatcacacacaggcttgttcc
tgtcagcctgtgatgtgccctaatgagtgttcagcaacagttctgcagaaggaacttgaa
cagcacctaacatcgcagtgcatcttgcgggttaccaggtgtgcactgtgtgaccagcct
ttcacttttaatcaagaacagctccatctcttgagttgttcgcgggtgactgtgacatgc
gagatgtgtggagctatgatgcctcgaggtgaagtgccatcccataccacagagtcctgt
cctagagttgtagttgcctgttcatatgcagaacatgggtgccatcataaaatgacaaga
tctgaccttgatcagcataatgaacaagcaatccagtatcatcttcagcttctttcatct
gcacacaaaaagatgaatgcatttgtttctgacttgagtcgaacagtaggactcattcag
tctccttatggaaacttcagccggcaaccaagtcttcgaagtcagatgtcagcaacttcg
cctataccagaaaatcattcaagcccatcacagcatgacagaaatcttgagaagtctttt
ggtgcttatggaggaactgttagtctcaatgatagatcatcattaactccacagagtgat
gaatttggaaatgaaatcaataagctggagcttcaattaaacaatttaagtgcaagtgaa
acaaagagtgggtctaaaattccaaacaccgttactcatcaggaaatcattttacgggat
gttagtgaaaagacagttgacttaaatcaaaggatgttagaggaaactatcaagttaagc
aatttgagtaagagaattgaggaagttgatgctatggtagaagttcaattagcagatgtg
actgggaaattttgtaatggagagtatgtctggaaaatcaagcatttctctcatttatgc
acagagcttcagaataaaccaggtagagtgctccatagtccggcattttacacatcccaa
tttggatataaattttgtttacgtactaatataacatggaagtctaacgagtattttttt
actttattcatacactctatgcaaggagaaaatgatgactttttagaatggccttttagt
ggagaaataacactctccattttggattgtggtcccaatgtaccaaaaaaacatattacg
gaatccatggtaagcaagccagatctgcaagcatttcagcgacctgttgtatcaagaaat
cctaaaggctttggttatactgaatttgtacccctggcaaaattattgaaatctcaaggt
ggaagttacataaacagtgacgttctttgtatccgtgcagtcgtttctccaaaagcacca
aaatcatcaagttga
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