KEGG   Macrobrachium nipponense (oriental river prawn): 135215640
Entry
135215640         CDS       T09903                                 
Name
(RefSeq) intraflagellar transport protein 122 homolog
  KO
K19656  intraflagellar transport protein 122
Organism
mnz  Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:mnz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:mnz03037]
    135215640
Cilium and associated proteins [BR:mnz03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   135215640
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd WD40 Beta-prop_EML_2 WD40_WDHD1_1st Zn_ribbon_IFT122 WD40_CDC20-Fz WD40_Prp19 Zn_ribbon_IFT122_C ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_EML Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd TPR_GEMI5 Beta-prop_IFT140_1st WDR90_beta-prop_4th TPR_IF140-IFT172 TPR_IFT80_172 PEP5_VPS11_N Beta-prop_IFT140_2nd Beta-prop_Vps41 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 135215640
NCBI-ProteinID: XP_064106632
LinkDB
Position
5:128507653..128742919
AA seq 1210 aa
MRAVPTWVDKVHDRDKVEQCIYDLCFRPDGSQLIVAAGNRVLVYDTADGALVQPLKGHKE
AVYCVCYSRDGKRFASGSADRSVIIWTSKLEGILKYSHNDAIQCLSYNPVSHQLASCALS
DFGLWSPEQKSVQKYKITSRIYSCAWTNDGVYLALGLANGTVSIRNKVGEEKMRIERPGG
TNSPVWSLAWNPAKDEPVDVLCVADWGQNLSFYCLSGKQVGKERPLGFDPCCVSYFSKGE
YLLLGGSNKSCLLYTREGVKLGTVGEQASWVWCCAARPDSNFVALGCQDGTIAYYQLIFS
TVHGLYKERYAFRENMTDVIIQHLITEQKVRIKCRDLVKKIAIYKHRLAVQLPERIIIYE
LYSQDASDMHYRVREKINQRLDCNLLVVCTNNIVLCQEKRLQCLNFSGVKEREWQMDSLI
RYIKVVGGPPNREGLLLGLKNGQVLKIFLDNAFPVPLLKIPAAIRCLDLSASRKKLAVVD
EHSTLLVYDVNTSELLFEEPNANSVAWNTSCEDMLCFSGNNTLNIKASNFPTHQQKLQGF
VVGFSGSKIFCLHIYSMSTIEVPQSAPMYQYLDKKLYKEAYEIACLGVTDGDWETLAKTA
LEGLQYDIAKKAFTRIKALKYLELINSIEERRHKGEVDNTIFLGDILAYDGKFSESAKLY
RKSGNDQLAMNMYTDLRMFDLAQEFLGSDETVDRKQLIKKKADWARNINEPRAAAEMYLS
AGETTKAIDIMGENGWVDMLLDVGRKTDKADRQTLSLCAQHLRRLGALTHAAEMYKKMGE
MQSVVELYVEVQDWEEAFALAEKHPEYRQLVYVPYATSLAEQDKFLQAQKAFHKAGKPEE
AFRVLEQLTLNAVNENRFDDAGYYFWMLSMQCLDIASEDEEEHDAMMEKFRNYQRKASMY
YVYHTIQRYMDEPFTSYMPEALFNISRFLMHELMTMQPDGVSKFSTMYTLAKQSRNLEAF
KLARYVLDKLQTLRIPPRFQEDVELAALKIRAKPFHDNEEHQPLCYRCSTTNPLVNNSGN
QCVNCGHPFVYSFVSFEILPVVEFVLEEDVTDEEGVRLIQQSGGNGPDDQEGGSKENDDD
DDDDNRWKQTHSGNAQALTLDSSPVHGSNNEDPFTANLMSFYPGGSEYQPVLLNRAALLA
LEPHDIIVCRWPKPLRYQFFKNIMPDVPITHCTHCNKMFHTDDYILQVLQKGHCPFCRTP
STDIGDHNIE
NT seq 3633 nt   +upstreamnt  +downstreamnt
atgagggcagttcctacttgggtggataaagttcacgacagagacaaagttgaacaatgt
atctatgatttgtgctttagacctgatggatctcaactaattgtagcagcaggaaaccgt
gtgttagtgtatgatacagcagatggggcattagttcagcctctaaaaggtcataaagaa
gctgtatattgtgtgtgttacagtcgagatgggaagcgatttgcttcaggaagtgcggat
agaagtgttattatatggacttcaaaactagagggcattttaaagtattcacataatgat
gcaatacagtgcttatcttataatccagtttcacatcagttagcctcatgtgctctaagt
gattttggcttatggtcaccggaacagaagagtgtacaaaaatataagatcaccagtaga
atttacagctgtgcttggactaatgatggtgtttatttggctcttggcttggcaaatgga
actgtgtccattaggaacaaggtgggtgaagaaaaaatgcgaattgaacggcctggaggt
accaactctcctgtttggtccttggcatggaatccagccaaagatgaaccagttgatgtg
ctttgtgtagctgactggggacagaatctttcattctattgtttgagtggaaaacaggtt
ggcaaagagaggcctctgggttttgatccatgttgtgtcagctatttcagtaaaggggag
tatcttcttttgggaggctcaaacaagtcatgcttgttatacaccagagaaggtgtgaag
cttggaactgttggagaacaggcttcgtgggtttggtgttgtgctgccagacctgactcc
aattttgttgcacttggatgtcaggatggaaccattgcttactaccagctaatattctct
acagtgcatggtctttacaaagagcgctatgcattcagagaaaatatgactgatgtcatt
attcagcatttgataactgagcagaaagtgcggatcaaatgccgagatcttgtgaagaaa
atagctatatacaagcaccgtttagcagtccagcttcctgaacggatcatcatttatgag
ctgtattcacaagatgcatcagatatgcattacagggtgcgagagaagataaatcagcgg
ctagactgcaatttacttgttgtttgtacaaacaatatagttctttgtcaggagaagcgg
ttacagtgtcttaattttagtggtgtcaaggaacgtgagtggcagatggattcacttatt
cgttacatcaaagtggttggtggcccacctaatagagaaggattgttgcttggcttgaaa
aatggacaggttttgaagatttttctggacaatgcatttcctgttccattgttgaaaatt
ccggcagccatacgttgtctcgatctcagtgcttcaaggaaaaagttagctgtagtagat
gaacatagtacactcctggtttatgatgtcaatacttcagagttattatttgaggaacca
aatgccaatagtgtagcatggaataccagctgtgaagacatgttatgtttctcaggaaat
aataccttaaatattaaagcatcaaattttccaactcatcaacaaaaactgcagggattt
gttgtagggttcagtggcagcaaaatattctgtctacatatctatagcatgtcaactatt
gaagttcctcagtctgctcccatgtaccagtacttggataagaaattgtacaaagaggcg
tatgaaattgcttgcttaggggtaactgatggtgactgggaaaccctagctaagactgct
ttagaaggccttcagtatgacattgcaaagaaagccttcacacgcatcaaagctctgaaa
tatttagagctgattaactctattgaggaacgacggcataaaggagaagttgataacact
atatttttgggtgatattcttgcatatgatggcaagttctcagagtcggctaaactgtat
cgtaagagtggtaatgatcaactggcgatgaatatgtatactgatctcaggatgtttgat
ttggctcaggagttccttggttctgatgaaacagtagatagaaaacaactaatcaagaag
aaagctgattgggcacgaaacataaatgaaccccgtgcagctgctgaaatgtatttatct
gctggagagacaaccaaagcaatagacatcatgggagaaaatggttgggttgacatgtta
ttggatgttggccgcaaaacagataaagcagatcgacaaactctaagtttatgtgcccaa
cacctacgtcgtcttggagcattgactcatgctgcagaaatgtacaagaaaatgggagaa
atgcagagtgttgttgaattatatgttgaagtacaagattgggaggaagcttttgcttta
gcggagaaacacccagagtatcgtcaactagtttatgttccatatgctacctcgctggct
gaacaagacaaatttttgcaagcacaaaaagcttttcataaggcgggtaaaccagaggaa
gcctttagagtacttgagcaactcactttgaatgcagtcaatgagaatcgttttgatgat
gctggatactacttttggatgctttctatgcagtgccttgacatagcttcagaggatgag
gaagaacacgatgcaatgatggagaaatttcgcaactaccaaaggaaggcttcaatgtat
tatgtttaccacacaatacagcgttatatggatgaaccatttacatcttacatgccagag
gctctctttaacatctccaggtttttaatgcatgaattgatgacgatgcaaccagatggt
gtttcaaaattctctaccatgtatactctagccaagcaatcacgaaatctagaagcattt
aaacttgctagatatgttttggataagttacaaacactacgtattccaccaagatttcag
gaagatgtagaattggctgctctcaaaatccgtgccaaaccttttcatgacaatgaagag
caccagccactatgttaccgttgctcaaccactaatcctttagtaaacaacagtggtaac
cagtgtgttaactgtgggcatccctttgtttattcttttgtgtcatttgagattcttcca
gtggttgaatttgttttagaggaggacgttacagatgaagagggggtacgtttgattcag
cagtctggaggaaatggcccagatgatcaggaaggtggatcaaaagaaaatgatgatgat
gatgatgatgataacagatggaaacaaactcattctggaaatgcccaggctttgacattg
gacagctcacctgtacatggaagcaacaatgaagatccgttcactgctaatcttatgagc
ttttatcctggcggttctgagtatcaaccagttcttcttaaccgagcagcactattagct
cttgaaccacatgacattattgtctgtcgctggccgaagcctctgaggtatcaattcttt
aagaacatcatgccagatgttcctatcacacactgtactcactgtaataagatgttccat
actgatgattacatacttcaggtactgcaaaaaggccactgccctttctgtcgtacacct
tcaacagatattggagaccacaacatagagtga

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