Macrobrachium nipponense (oriental river prawn): 135216930
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Entry
135216930 CDS
T09903
Name
(RefSeq) cadherin-99C-like
KO
K16500
protocadherin-15
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
135216930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mnz03037
]
135216930
04515 Cell adhesion molecules [BR:
mnz04515
]
135216930
Cilium and associated proteins [BR:
mnz03037
]
Primary cilia and associated proteins
USH complex and associated proteins
135216930
Cell adhesion molecules [BR:
mnz04515
]
Cadherins
Protocadherins
135216930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_Cad99C_N
Cadherin_FAT4_N
Ig_CLSTN
Cadherin_CELSR2_9th
Fibulin_C
CDH23_a-b
Cadherin_pro
Ig_BT4661_4th
Big_9
At5g65660_helical
Motif
Other DBs
NCBI-GeneID:
135216930
NCBI-ProteinID:
XP_064108546
LinkDB
All DBs
Position
6:complement(15250732..15426373)
Genome browser
AA seq
1563 aa
AA seq
DB search
MVLRDVHKVLWWLLAVYSSTVFAELCDVTTGQAVVILDITESDGSQVDQLTSPSELPIEG
QIGVDTDLEISSEGKEYFTLNEGRLQLVQALDRDANDLSTLSFQLSCSIKSSGEVRNIPV
IVRITDINDNKPVFSGLPYSITIPEITPVGTTVFKNVLADDIDAGVNGQVDYSIIPGNTN
PESDGYGFFGITLPHQGLVSINRSLDYERTPVYYVTIQAMDRAATAGQRLSSTATLTVNV
ADSDDQDPVFEYASCARVGTICANPEYHTSVTSGEVSGVLGIQPERIHAMDLDSLASPIR
YSFMSGRPATYDRYFAINTRTGAVTHIAAIDRAVTKKFEIVLKAEEESEAKRFATAKLII
DVMSVDSSPPMVTATSYTGNVDENAAPGTPVYDDYPDPRPIMLTVSDPDLMETDDKPVYS
WELTTTAFRVAPDGRLVVAESSLDRDPPNPGLYTFQIVARETKGNKAASAPITLTVVLND
VNDNEPRLPVYPPISVQAGSAFRNIAKITAKDNDAGKNAEIEYSIYQVSKNGKDKFTING
TTGELALVGEVDAGAQYSVTVRATDKGGLYSQSIIDVIVNRGPNKGGPVFTLPRYSASVS
EGTPPNSVILTLSAIDPEGDQSRFSLVNGNELRHFDIGETSGMLRLIDKLDRESLDAYSL
VVKAEDPEGLANTATVSITVGDINDQTPEFLGLPYSFRVNEGQENAVVGTVKAEDGDEGI
RGEVFYYVPEDSPFTIASDTGEIRTKQALNYEKEQVHYLVVTAKDGATDPHIATATVTVL
VSDVGDEPPVFSQQVYEASVAENLPDALLAIVSATDPDTIPEITYVLVNGSSLLFNIDPE
SGRVTTARGLDYEVQSQHTIVIGTLENPSGGPQATCSVLVTVEDVNDNPPVFNDQLLSFT
IPEAKPPGSLIATVTAVDSDGTKPNNMVEYELTGFDNALEYFEVNKESGDITIKADLQTE
PESDFTLQLVARDGGEPQLETTSTVSVFVERPIPEETSEELYASFSSDKFTAAVSEELEV
GMLVKKLTVLNKPDIQRHLRCEITEGNDLGIFEMDVTAERHCAIKLKTPLDYESRSNYSL
TVLLKSPSAPSNITNRIAKVDISVTDENDNKPEIFADSPYNNRTHGYFAFISEDSPVNTQ
VIRFKAEDKDSFSNTIHYELVPESNRGRYFRIDSTGRIKTDRELSGVPSELLPFNLTVIA
KDSPHNSSSVSLTTSASVTVNVVGENHHIVLVIDESPEKVKGRQEDLAKVIQEDSNHIIK
IERIEPRKYIGNGTIERDDGATDVWFIAADSNSGRLIDWKQSDLGELFSNSSSESTSVVN
LINEKLGLQATDIRSPVLLQPVVETVAPPVRDVVTLEAFQIALIVLAGFIVVLGITGICY
ICFQWKRYVRHRDEASKAVVVVAPPYERVGSIIEPAAKEYEVQVLHMSVPMDDDSVQDLP
IDIRPSHHFSMDNVSYITKQQLSEDESSNSSRDLDMDLGRSHHPHDEPVGIDWDSPPPGQ
RHLQHMAAMAASSPSGRNPAYEHFADDDDGGDGPISVSATNENVMFGRRGILDPSPVQTT
TEL
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggtgttaagggatgtccataaagtgctgtggtggttgttggctgtatattcgtccacc
gttttcgcagaattgtgtgatgtcacaactggacaggctgtcgtcatcctggacataact
gagagcgacggatcacaagtcgaccagttgacctccccctcggagttgcccatcgagggg
cagatcggcgtagacaccgacctggagatctcctcggaagggaaggaatacttcaccctg
aatgagggcagacttcagctcgtccaggccctcgacagagatgccaatgatctctccact
ttgagtttccagttgtcgtgttccatcaaaagctcaggtgaggtgaggaacatacctgtg
atcgtgcgaataacggacattaatgacaacaagcccgtattttccgggttaccctactcc
atcaccattccagagataacgccagtaggaacgacggtcttcaaaaacgtgttggcagat
gacattgatgcaggtgtaaatggccaggtagattacagcatcataccaggtaacacgaat
ccggagagcgatgggtacggcttcttcggcatcactctccctcaccaaggcctcgtcagc
atcaacagatcccttgactatgagagaacacctgtctactacgtcaccatccaagctatg
gaccgagcggcaacagcgggacagcggctcagcagcactgccacgctcacggtgaatgtc
gcggacagcgacgatcaagatcccgtctttgagtatgcatcttgcgctcgcgtgggcacc
atttgcgctaaccctgagtaccatacgtccgtcacctcaggagaagtttctggtgttctt
ggaattcagcccgagagaattcatgcaatggatttggattctttggcatctcctataaga
tattccttcatgtcaggacgtccagcaacttatgatcgatactttgcaataaatactaga
actggagcagttacgcatatcgcagcgattgacagagctgtcaccaaaaaatttgaaatt
gtcttgaaggctgaagaagaaagtgaagcaaagagatttgcaactgccaagttgatcata
gatgtaatgagtgttgactcctccccacctatggtcactgccacctcctatactgggaat
gttgatgaaaatgcagctcctggaacaccagtatatgatgactatcctgatcctcggccc
attatgctgactgtgtcagaccctgatcttatggagactgatgataaaccagtttattct
tgggaattgactacaacagctttccgtgtggcaccagatgggcgactagttgttgcagag
agcagccttgatagagatcctcctaatcctggattatatacttttcagatagtggcacga
gagaccaaaggcaataaggctgctagtgcacctatcactctcactgttgtattgaatgat
gtcaatgacaatgaaccaagactacctgtatatccaccaatatctgttcaagctggttca
gccttcaggaatattgctaagattactgctaaggacaatgatgctggaaaaaatgccgag
attgaatacagtatctaccaagtttccaagaatgggaaggacaagttcactattaatggc
actactggtgaattggcccttgttggtgaagtagatgcaggagcacagtattcagttaca
gtcagggctactgataaaggaggattgtatagtcaaagtattattgatgtcatagttaac
agaggaccgaacaaaggaggcccagtattcactcttcctcgttactctgcatccgttagt
gaaggaaccccaccgaattctgttattttaactttgtcggccatagacccagaaggagat
caatctcgtttctcattagttaatggcaatgaactccgccactttgatattggagaaact
tcagggatgctccgtctaattgataagttagacagagaaagtttagatgcatactcattg
gttgtgaaagcagaagatccagaaggcttggcaaacacagctacagttagtataacagtg
ggagatatcaatgaccaaaccccagaatttttaggtcttccctattcctttagagtgaat
gaaggccaagaaaatgctgtggttggtactgtaaaggctgaggatggtgacgagggaata
cggggtgaagttttctattatgttcctgaagattctccattcactattgcaagtgataca
ggggaaataagaactaagcaggctcttaactatgagaaggagcaggtacactatttagtt
gtaacagctaaagacggtgcaactgatcctcacatagctacagctacagtaactgttctt
gtgagtgatgttggagatgaaccaccagtcttttctcaacaagtctacgaagcctctgtt
gctgaaaatttacctgatgcactgctagccatagtgtctgcaactgatccagatactata
ccagagataacttatgttttggtgaatggtagttccctgttgttcaatatagatccagag
agtggccgtgttactacagcccgtggattggactatgaagtacagtcacagcacactatc
gtcattggaacccttgaaaatccaagtggtggtcctcaggcaacttgttctgttctagta
acagtagaagatgttaatgacaaccctccagtattcaacgatcagttactctcttttaca
atacctgaggcaaaaccacctgggtcattaattgctactgtcactgctgtagatagtgat
ggtaccaagcctaacaatatggtcgagtatgaattgactggtttcgataatgcacttgag
tattttgaagttaataaagaatcaggtgatatcaccataaaagctgatctccaaactgaa
ccagaatctgatttcacactacaattagtagcacgagatggtggtgaaccgcagcttgaa
actacatcaacagtttcagtattcgttgaacgtccaattccagaagaaacaagtgaagag
ttatatgcttcattttccagtgataaattcactgctgcagtttctgaagagctggaagta
ggcatgcttgttaaaaaattgacagtcctcaacaagccagatattcagagacacctacgc
tgtgaaatcacagaaggcaatgacttaggaatatttgaaatggatgtcactgctgagagg
cattgtgctataaagcttaaaacgcctcttgattatgagtccagaagcaactattctttg
actgttttgttaaagtccccatcagccccatcaaatataacaaatagaattgcgaaggta
gatatcagtgtgacagatgaaaatgacaacaagccagaaatatttgctgattccccatac
aataatcgtactcatggatattttgcctttatatctgaggattctcctgttaatacacaa
gtaataaggttcaaggcagaggacaaggactctttcagtaacacgattcactatgaactg
gttccagagagtaatcgtggacgctattttcgaattgattctaccggtcgcatcaaaaca
gatcgggaactatcgggagtaccctcagagctgcttccattcaatttgactgttatagcc
aaggatagccctcacaacagctcttctgtctcactcactacctcagcctcagttactgtt
aatgtggttggagaaaatcatcacatagtgttagtcattgatgaatctcctgaaaaagta
aaaggcagacaagaagatcttgcaaaagttattcaggaagattcaaatcatatcattaag
attgagagaatagaaccacgcaaatatattggaaatgggaccattgagagggatgatgga
gcaacagatgtatggttcattgcggctgattccaactctggtcggttaatagactggaaa
caatcagatttaggggaactcttcagtaatagttctagtgagagtacaagtgttgtgaat
ctaataaatgaaaagctcggtctccaagcaacagatattcgatctccagttttgctccag
cctgtagtggaaacagttgctcctccagtcagagatgtagtcactttagaagcttttcaa
atagcactcattgtccttgctggcttcattgtggttttaggaatcactggcatttgttac
atttgcttccagtggaaaaggtatgtcagacatcgagatgaggctagcaaagctgtggtg
gtagtagctccaccttatgaaagagtgggatctatcatagaaccagcagcaaaggaatat
gaagtgcaggttcttcatatgagtgttcctatggatgatgactctgtacaagatttacca
atagatatacgtccttcacatcatttttcaatggataatgtgtcatatataacaaaacaa
caattgagtgaggatgagagtagtaatagcagcagagatttggacatggacttaggaagg
tctcatcaccctcatgatgagcctgtcggaattgactgggatagtcctcctcctggacaa
cggcatttgcagcacatggctgccatggcagcttcatctccttccggaaggaatccagct
tatgagcactttgctgatgacgatgatggaggtgatggtccaattagtgtaagcgcaaca
aatgaaaatgtaatgtttggtcgtcgtggtattttggatccttctcctgtacaaacaact
acagaactttag
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integrated database retrieval system
