Macrobrachium nipponense (oriental river prawn): 135220585
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Entry
135220585 CDS
T09903
Name
(RefSeq) lysosomal cobalamin transporter ABCD4-like isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Pathway
mnz02010
ABC transporters
mnz04146
Peroxisome
mnz04977
Vitamin digestion and absorption
mnz04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
135220585
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
135220585
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
135220585
04980 Cobalamin transport and metabolism
135220585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnz04131
]
135220585
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mnz02000
]
135220585
Enzymes [BR:
mnz01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
135220585
Membrane trafficking [BR:
mnz04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
135220585
Transporters [BR:
mnz02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
135220585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
135220585
NCBI-ProteinID:
XP_064113907
LinkDB
All DBs
Position
2:complement(53305886..53580393)
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AA seq
638 aa
AA seq
DB search
MICMASMEKPKDKSDDVGFDLHMFQRLLKILGVIFPGVLSVPSGLFFLLLCLSCLEQYLV
YYMGLVPSKYYGVFGGRDFDGFVLLTLQSCGLIVAISGAKAVKDYINNVLYVTWRQLLGR
GLHRLYFFGINYYTLNVLNTTIDNPDQRMTQDVDKLCFTLAGITTKVIISPFQIGYYTHQ
TFAVAGWLGLLAIYGMFFVGTVVNKFLMSPLVKFVVRQEKREGNFRFKHMQVRVNAESVA
FHVSGSVESRKTNQALDLLIRSQQKLFNRQIWLTFFKNILDYFGSIVSYLAISMPIFSGK
FDDTEDISTIVSAYSFVSMYLVYSLTSLADLTTKVVLLSGVTHRVAQLVECLLKLQSDWD
ISTLQASSSFTNITQKFRKSTEPHASSGDAECLVNDDDDDDVTQVFGGDYSALEYAFILN
DVTIIAPGGSEPLVKNFHLEVKKGENILFMGPSSSGKSSIFRVMLGLWPSSHGTVAHDFA
PGPKTVIFVPQKPMLTNGSLTEQIIYPLRLDPGNPLSDDVCRGILHLLQELHMTGLVERC
GGLHNDPEWNWDDALSPGEMQRVCFARVLFHRPQFALLDESTSALSLDVENYLYQACLDL
NITIVSIGHRETLLKYHDTLITLDGKGGWRKDEIRVGS
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtatggcaagtatggagaaaccaaaagataaaagcgatgacgtgggatttgat
ttgcacatgttccaacggttactcaagatcctcggtgttattttccctggagttttatca
gttccctcagggctcttcttcctcctcttgtgccttagctgtctagagcagtacctggta
tactacatgggccttgttccaagcaaatattatggtgtttttggaggaagagattttgat
ggttttgtgttgttaacacttcagtcctgtggtcttatagttgctatctctggggcaaag
gctgtgaaagattacatcaataatgttttgtacgttacttggaggcagcttctaggacgt
ggtcttcatcgtttgtatttctttgggatcaattattacactctcaacgttctaaacaca
acaattgataatccggatcagcgcatgacccaagatgttgacaagctctgcttcaccttg
gcaggaattacaacaaaggttatcataagccctttccaaatagggtattacactcaccaa
acttttgcagtggcaggatggcttggattgctagctatctatggcatgttttttgttgga
actgttgttaacaagtttttgatgtctccgcttgtgaagtttgttgtaaggcaagaaaaa
cgtgaaggaaattttaggtttaagcacatgcaagtgcgtgtgaatgcagaatcagttgct
ttccatgtatcagggtcagttgaatctcgcaaaacaaatcaagcgttagatcttcttata
cgttcacagcaaaagctctttaatcgacagatctggttgactttcttcaaaaatattttg
gactattttggctccattgtatcttatttggctatatcaatgccaatattcagtggcaag
tttgatgacactgaagatatttctaccattgttagtgcttattcctttgtttcgatgtac
ctagtttatagccttacatccttagctgatcttacaaccaaagttgtgctgttatctgga
gtaacacatcgagtggcacagttagtagagtgtcttctgaaacttcaaagtgattgggac
atttcaactttacaggcatcatcatcttttaccaacattacccagaagttccgaaagtca
actgaacctcatgcatcttcaggtgatgcagaatgtttggttaatgatgatgatgatgat
gatgtcacccaagtatttggaggagattacagtgctctagagtatgccttcattttaaat
gatgtaacaattattgctccagggggcagtgaaccactagtgaaaaattttcatctagag
gtaaaaaaaggtgaaaatattcttttcatgggccctagttcctctggcaagtccagtatc
tttagggtaatgcttggcttatggccttcatcccatggtacagttgcacatgattttgct
ccgggcccaaaaactgtgatttttgttcctcagaaaccaatgttaacaaatggctcactt
actgaacagataatctaccccttgaggctggatccagggaatccattaagtgacgatgta
tgtagaggaattttgcatcttctgcaggaactgcacatgactggtcttgttgagagatgt
ggtggccttcacaatgatccagagtggaactgggatgatgccttatctcctggagaaatg
cagagagtgtgtttcgctagagtacttttccaccgacctcagtttgcattactggatgag
tcaacaagcgctttaagtcttgatgttgaaaactacttgtatcaagcatgtttagacctc
aatataactatagttagcataggacatagggaaactttattaaagtatcatgacacttta
attacccttgatgggaagggtggttggaggaaagatgaaattcgtgttggctcctaa
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