Macrobrachium nipponense (oriental river prawn): 135222312
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Entry
135222312 CDS
T09903
Name
(RefSeq) ATP-dependent RNA helicase A-like
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
mnz
Macrobrachium nipponense (oriental river prawn)
Brite
KEGG Orthology (KO) [BR:
mnz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnz03041
]
135222312
03012 Translation factors [BR:
mnz03012
]
135222312
Enzymes [BR:
mnz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
135222312
5.6.2.6 RNA 3'-5' helicase
135222312
Spliceosome [BR:
mnz03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
135222312
Translation factors [BR:
mnz03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
135222312
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_C
Dicer_dimer
HA2_N
DND1_DSRM
AAA_19
ATPase
AAA_22
nSTAND3
PIK3CG_ABD
AAA_23
Motif
Other DBs
NCBI-GeneID:
135222312
NCBI-ProteinID:
XP_064116471
LinkDB
All DBs
Position
20:complement(15012184..15062185)
Genome browser
AA seq
1308 aa
AA seq
DB search
MTENVKQWLYAYCGKKKINPVYDIRNSGPKHRQRFLCEVRVPGYSYVGVGNSTTKKDAGE
NAAKDFVQYLIRQGEVAAEEVPDMKGPDKSIQAADSNAGNAEWQPSAPMKPVPGLREEGN
VYRPIQHEGREKPLTYMDRVEERRAIEDAEECDMTANIHGNWTVENAKSRLHMFMQTSKI
SADYKYKAIGPDHNRSFVAEMQFYVKDLGRDVYARETGSNKQAASKSCALSLVRQLYHLN
VIEAFTGSFKKKEAEQLKPYEVKLSSELITQLDGIIRASNVEPVDLRGIPPNVPVSLVPN
VQLAEFECSDGPDSFSGVVSWSPPQQNWNPWTACNIDVGPLANMDLEEHSVELQRLHQRR
LQDDSTLQAIIDKRYSLPVYNKKQEILEAIYDNPVTIIRGNTGCGKTTQVCQYILDDCIQ
SGSGAYCNIIVTQPRRISAVSVADRVAQERGEELGNSVGYSVRFESILPRPYGGVLFCTV
GVLLRKLEAGLRGVSHVIVDEIHERDINTDFILIVLRDMVRAFPDLRIILMSATIDISLF
SDYFENPVVVEISGRAFPVQQYFLEDCVELTKFVPVPDSKKKNKKDKDDDLPGDEPEENM
NYVKSDEYSNETKRSMAMMSEKDLSFELIEALLKYIRDLNTPGAVLVFLPGWNLIFALMK
HLNHHPAFSSRDYCILPLHSQLPREDQRRVFEPVPPGVTKIILATNIAETSITIDDVVFV
IDSCKAKMKLFTSHNNMTNYATVWASRTNLEQRKGRAGRVRPGFCFHLCSKARFDSLDEH
MTPEMFRTPLHEVSLSIKLLRLGSIGEFLSKAVQAPPIDAVIEAEVILREMKCLDRHDEL
TPLGRILARLPIEPRLGKMVILGSIFFCGDAMCTIAAHNSTSPEIFIIPPEFRRLSPFQK
AFSGNRFSDHIAALNAFNCWEEARVGGEDAEINFCDYKGLSMPTLRVTWEAKNQLKELMV
AAGFPEECLLPQTYNFVGPDPKVDVLVGLMTLGHYPNVCVHKEKRKVLTQESKAALIHKS
SVNCSNKEIHYPSPFFVFGEKIRTRAVSCKQMTMVTPIHLMLFGARRVEAVDGIVRLDGW
INLELDPEIAAKIMVLRPSIDALIVRGTTDPEHITEPNHLDEQILNCVRQLCRLNAGRFE
MEPISMGNTNSFRPPRQFSNFGGGPPNKRMRGDDGPGGGDTGGFRPGGVYTANRGFGGRG
GGGYMGNRGGRGGRGSGSRGGYGGRGGGFGGRGGFGGGYGMGGARFGGMGGSGFGDRGGG
GGGYGDRGGSGGFGDRGGSGGFGDRGGSGGFGDRGGSGGFGDRGGSGG
NT seq
3926 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaatgtaaagcagtggctgtatgcctactgtggaaagaaaaaaattaaccca
gtgtatgatatcagaaactctggaccaaagcatcgccaaagatttttgtgtgaagttcgt
gtccctggatactcttatgtgggtgttggtaattcaacaacaaagaaagatgctggagaa
aatgctgccaaggattttgttcagtacctcattcgacagggtgaggttgcagcagaagag
gttcctgacatgaagggtcctgataaatccattcaagctgcagatagcaatgctggcaat
gctgagtggcagccaagtgctccaatgaaaccagttcctggacttcgtgaagagggaaat
gtttacagaccgatacagcatgaagggagagagaaacccctgacgtacatggatagagtt
gaggagaggagagctattgaggatgctgaggaatgtgatatgactgccaatatccatggc
aactggactgtggaaaatgcaaaatcacgtctgcatatgttcatgcaaaccagcaagata
agtgcagactacaaatacaaagcaattggccctgatcacaacaggagttttgttgctgag
atgcagttttatgtaaaggacttaggaagagatgtttatgcccgagagactggttccaac
aagcaggctgctagtaagagctgcgcactgtcactagtacgacagctatatcatttgaat
gtaatcgaagcattcacaggatcatttaagaaaaaggaggcagagcagttgaaaccttat
gaagtaaaacttagctcagagttaataacacagttggatggaattataagggcatcaaat
gtagaaccagtagatttgagaggtattcctccaaatgtcccagtaagtttggtacccaat
gtacagctggctgaatttgagtgttcagatggaccagattcatttagtggcgtcgtttca
tggtcaccaccccagcagaattggaatccctggactgcatgtaacatcgatgttggacca
ctagccaatatggatctagaggaacatagtgtagaacttcaaaggttacaccaacgtcgt
ctccaggatgacagcaccctccaggccattatagataagagatattcactccctgtttat
aacaagaaacaagagatcctggaagcaatttacgataaccctgtcactataataagaggc
aacactggctgtggaaagacaacacaggtttgtcagtacatacttgatgactgtatccag
tcgggttcaggtgcatactgtaacattatcgtcacccagcccagacgaatatctgcagtt
tcagtggcagatcgtgttgctcaggaacgcggagaggaattgggtaacagtgtagggtat
tcagtgaggtttgagtccattctcccaaggccctatggtggagtgctcttctgcacagta
ggtgttctccttcgaaaactagaagctggtttgagaggtgtatcccatgtcattgttgat
gaaattcatgagcgagacatcaatacagatttcatccttattgttcttcgtgatatggtc
cgtgcattcccagatcttcgcatcattcttatgtcagccaccatagatataagtctgttc
tcagattattttgaaaaccctgttgtggtagaaatttctggtcgggctttccctgtacag
cagtacttcttagaagattgtgttgagcttaccaagttcgttcctgttcctgacagcaag
aagaaaaacaagaaggacaaggatgatgatctgcctggtgatgaacctgaagaaaatatg
aattatgtgaaatcagatgagtactcgaatgaaactaaacgttcaatggctatgatgagt
gaaaaggatttgagcttcgagctcatcgaagcattgctgaaatacataagggacctcaac
actcctggggctgtcttggtgtttcttcctgggtggaatcttatatttgctctaatgaaa
catctgaatcatcatccagcattcagtagtcgtgattactgtatcttaccattgcattct
caattgccccgtgaagatcagagaagagtatttgaacctgtacctccaggtgtgactaag
attatccttgctaccaatattgctgaaacttcaatcactatcgatgatgtcgtctttgtg
attgactcctgcaaagcaaaaatgaagctctttacatctcataacaacatgacaaattat
gccaccgtttgggcatcacgtacaaatcttgagcaacgaaagggtcgtgcagggagagtc
agacctggtttctgcttccatctttgcagtaaagcacgctttgacagtcttgatgaacat
atgactcctgagatgttccgaacaccacttcatgaagtttccctgtcgatcaagttgttg
cgtcttggatccattggagagttcctttcaaaggcagtgcaggcaccccccatagatgct
gtaattgaagctgaagtaattttaagagaaatgaagtgtttggatagacacgatgagtta
actccccttgggcgaatattggcacgtttacccattgagccacggttagggaagatggtg
attttaggatcaattttcttctgtggagatgcgatgtgtacaatagctgcccataattcc
acttccccagaaatctttatcattcctcctgaatttaggagactgagtcctttccagaaa
gcattctctggcaaccgttttagtgatcacatagcagccctcaatgcatttaactgctgg
gaagaggctcgtgtgggtggtgaggatgctgaaatcaatttctgtgattacaagggactt
tcgatgccaactctgcgagtaacttgggaagctaagaaccagcttaaagagctaatggta
gctgctggcttcccagaggagtgtcttctcccacagacctacaattttgttggccctgat
cctaaagttgatgtcttagtaggtctcatgactttaggacattaccctaatgtttgtgtt
cataaggaaaaacgaaaggtgctaacacaggagtcgaaagctgcgctcatccataaatct
tctgttaattgcagtaacaaggaaattcattacccatcaccattctttgtatttggagaa
aagattcgtacaagagcagtgtcttgtaagcagatgactatggtgactccaatacatctg
atgctgtttggtgctcggagagttgaagccgttgatggtattgtgcgtctagatggctgg
ataaatttggaattggatccagagatagctgcaaaaatcatggtcttgaggccgtccatt
gatgctttgatagtaagaggcaccacagatccagagcacataaccgaaccaaatcatcta
gatgaacagattttgaattgtgttcgtcagttgtgccgactaaatgctggaagatttgaa
atggaacctatttcaatgggaaatacaaattccttcagaccacctcgtcagttcagtaac
tttggcggcgggcctccaaacaaacgaatgagaggtgatgatggacccggtggtggtgat
acaggaggttttagacctggaggagtgtacactgctaacagaggttttggtggcagagga
ggtggaggctacatgggaaacagaggaggacgtggtggaagaggaagtggaagcagagga
ggatacggtggaagaggtggaggatttggaggcaggggtggattcggcggtggctatgga
atgggtggtgccagattcggtggcatgggaggaagcgggtttggtgatcgaggaggtggc
ggcggaggatacggagacaggggtggcagtggaggtttcggagacaggggtggcagtgga
ggtttcggagacaggggtggcagtggaggtttcggagacaggggtggcagtggaggtttc
ggagacaggggtggcagtggaggttt
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integrated database retrieval system
