KEGG   Microvirga ossetica: BB934_19165
Entry
BB934_19165       CDS       T05139                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
moc  Microvirga ossetica
Pathway
moc03030  DNA replication
moc03410  Base excision repair
moc03420  Nucleotide excision repair
moc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:moc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BB934_19165
   03410 Base excision repair
    BB934_19165
   03420 Nucleotide excision repair
    BB934_19165
   03430 Mismatch repair
    BB934_19165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:moc03032]
    BB934_19165
   03400 DNA repair and recombination proteins [BR:moc03400]
    BB934_19165
Enzymes [BR:moc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     BB934_19165
DNA replication proteins [BR:moc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     BB934_19165
DNA repair and recombination proteins [BR:moc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     BB934_19165
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     BB934_19165
   MMR (mismatch excision repair)
    DNA ligase
     BB934_19165
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BB934_19165
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT Nlig-Ia HHH
Other DBs
NCBI-ProteinID: ANY81925
UniProt: A0A1B2EPM0
LinkDB
Position
4063666..4065825
AA seq 719 aa
MPPRKSSSETPVDHLTPDEARLEHEAIGAEIKDHDRRYYEEDAPSVSDAEYDALRQRYEA
LEDQFPELKSPESLTEKVGSKVSEKFGKIRHKVPMLSLGNAFADEEVEEFVERIRRFLQW
KAEEPLAFTAEPKIDGLSLSLRYENGKLVSAATRGDGAVGEDVTNNARTVADIPHRLKGS
GVPDIFEVRGEVYLSHEDFAAINARQEAAGKALFANPRNAAAGSLRQLDASITASRPLRF
FAYAWGEVSKMPATTQHGMMECFKSFGLKVNPLTRLCTSVAELLEHYHAIETDRANLGYD
IDGVVYKVDSLSLQQRLGFVSRSPRWALAHKFPAQKAVTVLEGIEINVGRTGSLNPIARL
KPVTVGGVVVSNATLHNEDYIKGIGGNGEKIRGGVDIRIGDTVVINRAGDVIPKVLDVVL
EKRPRDAKPYEFPATCPACGSHAVREVNPRTGKEDAVRRCTGGLICPAQARERLKHFVSR
NAFDIEGLGMQRIDEFYEEGLIQRPQDIFTLEVRNAKSLKRLENREGWGETSAKNLFAAI
QARRSIALNRFIFALGIPHVGETSARLLARHFGTFEHLRETAKAAADPASEAHAELTAIG
GIGPVVADAIVEFFKEGHNEEMLDALLAEVATEPMEAPATASSPVAGKTVVFTGSLEQMT
REEAKAMAERLGAKVAGSVSKKTDIVVAGPGAGSKLAKAAELGLQVMDEDGWFALVGRG
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgcccccacgcaaatcctccagcgaaactcctgtcgatcacctgacgcccgatgaggcg
cgactcgagcacgaggcgatcggcgccgagatcaaggaccatgacaggcgctattacgaa
gaggatgcgcccagcgtctcggatgccgaatacgatgccctgcgccaacgctacgaggcg
ctggaggaccagtttcccgagctgaaatcgcccgagagcctgaccgaaaaggtcggctcc
aaggtgtcggagaaattcggcaagatccgtcacaaggtgccgatgctctcgctcggcaat
gccttcgcggacgaggaggtggaagaattcgtcgaacgcatccgccgcttcctgcaatgg
aaggccgaggagccgctcgccttcaccgccgagccgaagatcgacggcctgtcgctcagc
ctgcgctacgagaacggaaagctcgtctccgccgccacccgcggcgacggcgcggtcggc
gaggacgtgaccaacaatgcccgcacggttgccgacatcccgcatcggctcaagggttcg
ggtgttcccgacatcttcgaggtgcgcggcgaggtctatctctcgcacgaggattttgcc
gccatcaatgcgcgccaggaggcggccggaaaggcgctcttcgccaatccgcgcaacgcc
gcggccggcagcctgcgccagctcgatgcatcgatcaccgcatcgcgtccgttgcgcttc
ttcgcctatgcctggggcgaggtcagcaagatgccggcgacgacgcaacacggcatgatg
gaatgcttcaagagcttcggcctcaaggtcaatccgttgacccgcctctgcacgagcgtt
gccgaactgctcgagcattaccacgccatcgagaccgaccgcgccaatctcggctacgac
atcgacggcgtcgtctacaaggtcgattccttaagcctgcagcagcgcctcggcttcgtt
tcgcgctcgccgcgctgggcgctggcgcacaagttcccggcgcagaaggccgtgacggtg
ctcgaaggcatcgagatcaatgtgggacgcaccggctcgctcaatcccatcgcgcggctg
aagcccgttaccgtcggcggcgtcgtcgtgtcgaacgcgacgctgcacaacgaggattac
atcaagggcatcggcggcaacggcgagaagatccggggcggcgtcgacatccgcatcggc
gacacggtcgtcatcaaccgcgccggcgacgtgatcccgaaggtgctcgacgtggtgctg
gagaagcgcccgcgtgatgcgaagccgtatgaatttccggccacctgcccggcctgtggc
agccatgcggtgcgcgaggtcaatccgcgcacgggcaaggaggatgcggtgcgccgctgc
accggcggcctcatctgcccggcgcaggctcgcgagcgcctgaagcacttcgtgtcgcgc
aacgccttcgacatcgaaggcttgggcatgcagcgcatcgacgagttctatgaggaaggc
ctgatccagcgtccgcaggacatcttcacgctggaagtgcgcaatgcgaagagcctcaag
cggctcgagaaccgcgagggctggggcgagacgagcgcgaagaacctgttcgccgcgatt
caggcgcgccgctcgattgcgttgaaccgtttcatcttcgcgttgggcatcccgcatgtg
ggcgagacctcggcgcgtctgctggcgcgccatttcggcaccttcgagcacttgcgtgag
accgcgaaggccgcggccgatcccgcgtcggaggcgcatgcggagctgaccgccatcggc
ggcatcgggcctgtggtggccgatgccatcgtcgagttcttcaaggaaggccacaacgag
gagatgctcgacgcactgcttgcggaagtcgccaccgagccgatggaggcgccggctacc
gcgagctcgccggttgccggcaaaaccgtggtgttcaccggctccctcgagcagatgacc
cgggaagaggccaaggccatggccgagcggctgggggccaaggtggcgggctccgtgtcc
aagaagaccgatatcgtggtggccggccccggagccggctccaagctcgccaaggcggcc
gagctcgggcttcaggtcatggacgaggacggctggttcgccctcgtcgggcgggggtga

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