KEGG   Myroides odoratimimus: AS202_01505
Entry
AS202_01505       CDS       T04190                                 
Name
(GenBank) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
mod  Myroides odoratimimus
Pathway
mod03030  DNA replication
mod03410  Base excision repair
mod03420  Nucleotide excision repair
mod03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mod00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AS202_01505
   03410 Base excision repair
    AS202_01505
   03420 Nucleotide excision repair
    AS202_01505
   03430 Mismatch repair
    AS202_01505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mod03032]
    AS202_01505
   03400 DNA repair and recombination proteins [BR:mod03400]
    AS202_01505
Enzymes [BR:mod01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     AS202_01505
DNA replication proteins [BR:mod03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     AS202_01505
DNA repair and recombination proteins [BR:mod03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     AS202_01505
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     AS202_01505
   MMR (mismatch excision repair)
    DNA ligase
     AS202_01505
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      AS202_01505
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT BRCT_2 DNA_ligase_A_M
Other DBs
NCBI-ProteinID: ALU24924
UniProt: A0A0S7EA39
LinkDB
Position
complement(345854..347851)
AA seq 665 aa
MDIKAQLDLLRKELNEHNYNYYVLDNPTISDFDFDQKLKELEKLELAHPEYFDINSPTQR
VGGTVTKNFDTIVHRYRMYSLDNSYSKEDLLDWEQRVQKVLGDVPVEFTCELKYDGASIT
ITYEDGVLVRAVTRGDGVQGDDVTNNIRTIRSVPIRLNGDYPQSFDIRGEIVLPLAGFEK
MNQDLIEIGETPYSNPRNTASGSLKLQDSAEVAKRPLDCLLYNIVGSDLGVTTQYESLDK
ARAWGFKVPTISKLAKNIDEVLEFINYWDIHRHELPYETDGVVVKVNSLHYQDELGYTSK
APRWAIAYKFKAEQAETVLNSISYQVGRTGAITPVANLEPVQLAGTIVKRASLHNADQIA
KLDIRVNDSVYVEKGGEIIPKIVGVNLEARPADSERTVYIKECPECGTKLKRSVGEAQHY
CSNVYGCPPQIAGRIQHFISRKAMDIEGLGEETVVLLYKNELVENYADLYELKKEDVLGL
ERMGEKSADNLIKGIEASKQVPFERVLYALGIRYVGETVAKKLANHYKTIDALAEAPLME
LITVDEIGERIAQSVIDFFSSDINKEIIARLKGYGVQFVLEEKESTVVSDVLLGQTLVVS
GVFEQMSRDEIKQAIEDHGGKVGSSITSKTNYVVAGDKMGPSKLEKANKLGIKILTEAEF
IALIQ
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggatattaaagcacaattagatttacttcgcaaagaattaaatgaacataattataat
tattatgtgttggataatccaacgatttcagatttcgattttgatcagaaattaaaagaa
ttagagaagttagaattagctcacccagaatattttgatataaattctccaacacaaaga
gtaggaggtacggtgactaagaactttgatactatagtacaccgttatagaatgtattct
ttagataactcttattctaaggaagatttattagactgggaacaacgtgtacagaaagta
ttaggtgatgtgccagtagagtttacatgtgaattaaagtatgatggtgcatctattacg
attacgtatgaagatggagtgctggtaagagcagtgacacgaggtgatggagtgcaaggg
gatgatgtgactaataatattagaacaattagatcagttcctattcgattaaacggagat
tatcctcagagttttgatattcgtggagagattgtattgccattggcagggtttgaaaag
atgaatcaagatttgatagaaatcggagagacgccttattctaatccaagaaatacagct
tctggtagtttgaaattacaagatagtgccgaggttgcaaaacgtcctttagattgtcta
ctttataatatagtaggaagtgatctaggggtaacaacacaatatgaaagtttagacaaa
gctagagcatggggatttaaagttcctactatctctaagttagctaagaatattgatgaa
gtattagagtttataaattattgggatattcatagacatgagctaccttatgagacagat
ggagtggtggttaaggtcaattcattgcattatcaagatgaattagggtatacttctaaa
gcaccgagatgggctatagcatataaatttaaagctgaacaagcagagactgtattaaac
tctatatcatatcaagtaggtagaacaggtgctataactcctgtagcaaacttggaacct
gtacagttggcaggaacgatagtaaaacgtgcttctttacacaatgcagatcagatagcg
aagttagatattcgtgtaaatgactctgtatatgtggaaaaaggaggagagattatcccg
aaaatagtaggtgtgaatttagaggctagaccagctgactctgaacgtacagtatacatt
aaggaatgccctgaatgtggtactaagttaaagagaagtgtcggggaggcacaacactat
tgttcaaatgtgtatggatgtccacctcaaatagcgggtaggatacagcactttatctct
cgtaaggcgatggatatagaggggctgggagaagaaactgtagtactgttgtacaaaaat
gaattagtagagaattacgctgacttatacgagttaaagaaagaagatgttctaggttta
gaacgcatgggagagaagtctgcagataatctgataaaaggtatagaagcttctaaacag
gttccttttgaacgtgtattatacgcattagggatccgttatgtaggagagactgtggct
aaaaagttagcaaatcattataagacaatagatgctctggcagaagctccgttaatggag
ttgataacagtagatgaaattggagaaagaatagcacaaagtgtaatagacttctttagt
agtgatattaataaagaaataattgctagactaaagggatatggtgtgcaatttgtgtta
gaagaaaaggaatctacggtagtgtcagatgttcttctaggacagacattagtggtatct
ggggtgtttgaacaaatgtctcgcgatgagattaaacaagctatcgaagatcatggagga
aaagtaggaagttctattacctctaagactaattatgtcgtggcaggagataaaatggga
ccatctaagctagaaaaagcaaataaactaggtattaaaatattaacagaagcggagttt
attgcgttaattcaataa

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