Mesomycoplasma ovipneumoniae: NCTC10151_00634
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Entry
NCTC10151_00634 CDS
T08113
Symbol
lig
Name
(GenBank) NAD(+)-dependent DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
moe
Mesomycoplasma ovipneumoniae
Pathway
moe03030
DNA replication
moe03410
Base excision repair
moe03420
Nucleotide excision repair
moe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
moe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10151_00634 (lig)
03410 Base excision repair
NCTC10151_00634 (lig)
03420 Nucleotide excision repair
NCTC10151_00634 (lig)
03430 Mismatch repair
NCTC10151_00634 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
moe03032
]
NCTC10151_00634 (lig)
03400 DNA repair and recombination proteins [BR:
moe03400
]
NCTC10151_00634 (lig)
Enzymes [BR:
moe01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
NCTC10151_00634 (lig)
DNA replication proteins [BR:
moe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC10151_00634 (lig)
DNA repair and recombination proteins [BR:
moe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
NCTC10151_00634 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC10151_00634 (lig)
MMR (mismatch excision repair)
DNA ligase
NCTC10151_00634 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NCTC10151_00634 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
BRCT
PTCB-BRCT
DNA_ligase_ZBD
Nlig-Ia
BRCT_2
Nucleolin_bd
RNA_ligase
OGG_N
Motif
Other DBs
NCBI-ProteinID:
VEU71923
LinkDB
All DBs
Position
4:complement(898247..900304)
Genome browser
AA seq
685 aa
AA seq
DB search
MENNSKIRNEILELRKQIETWNHHYYQLQNPLVDDLIYDKKLRELINLEQKYYYLFTLEE
LNSSPSQQVGSKITSKFAKIKHSVPMLSLNKSHTKSELEKWAQKAMVILENVTFFVEPKI
DGISLSLIYKNGQLIQALTRGDGVFGEDVLVNVLKIKDEFIPKSINYFDDLEIRGEIYID
NFAFESLQTETNVFKNPRNAASGILRRYKKNQSKTEKDSASSDFSFLSGFFYTLVEPEKH
KIFRQSEAITFLKKLGFKTNDFQKKCNNLNEVFDFIGQIKQKREQLNYNIDGVVIKINEF
LLYDQLGFTSKFPHSIIAFKFEDDVAKTKLLEIFPTIGRTGKVTYNAKIEPVNLGGSLIS
SAVLPNYSYIENLKLNLMSDVFVKKAGEIIPQIIGSVEKHEKTNFSISKNCPKCQSELIF
SESGIDQFCQNKNCPGIILQKIVHFSSKAALNIETLAEKRIQTLLDKKIISNICDIFDLK
NNLEKIYSEFKPSQLNSENKRAPSLQIKSVIKLLNEVEKAKNIDFHRLIFGLGIKNVGIK
AAKILARYAKNISELRKLDFEILKNQNDFGPVIISSLTDYFNNEENQKLLDCLENVNFNF
KNPTISPSSIGWTSFAISGKLSKPRHEFVKIIEQTGAYFHTSITKQTAYLVAGESTGSKI
EKAIKLGVKRISEEEFWDLIKSKIE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataattctaaaattcgcaatgaaattcttgagttaagaaagcaaattgaaact
tgaaatcatcattactatcaactgcaaaatccacttgttgatgatttaatttatgacaaa
aagctgagagaattaataaatttggagcaaaaatattactatctttttactttagaagaa
cttaattcatctccaagccaacaagttggtagcaaaattacatcaaaatttgccaaaatt
aaacactcagttccgatgctgtcgctcaataagtctcatacaaaatctgaacttgaaaaa
tgagcccaaaaagcaatggtaattttagaaaatgtaactttttttgtcgagccaaaaatt
gatggaatttccctttcactaatttataaaaacggccaacttattcaagcgctaactcgt
ggcgacggtgtttttggcgaggatgttttagttaatgtccttaaaattaaggatgaattc
atccctaaatcaataaattattttgatgaccttgaaataagaggggaaatttacatagat
aattttgcctttgaaagtttacaaactgagacaaatgtctttaaaaatccacgtaatgct
gcaagtggaattcttagacgatataaaaaaaatcaatctaaaacagaaaaagattcagcc
agcagtgatttttcatttttaagcgggtttttttatacacttgttgagccagaaaaacat
aaaatttttagacagtcagaggcaatcacttttttaaaaaaattaggttttaaaactaat
gattttcaaaaaaaatgcaataatttaaacgaagtttttgactttattggtcaaattaag
caaaaaagagagcaactaaattacaatattgacggcgttgttatcaaaattaatgagttt
ttactttatgatcagttaggctttacttcaaaatttcctcatagtattattgcctttaaa
tttgaagatgatgttgcaaaaactaaactactagaaatttttcccacaattggaagaacg
gggaaagtcacatataatgccaaaattgaacccgtaaatcttggcggtagtcttatttct
tcagctgttttgcctaattattcttatattgaaaatctaaaattaaatttaatgtctgat
gtttttgttaaaaaagcaggcgaaattatcccgcaaattatcggaagtgttgaaaaacac
gaaaaaactaatttttcaatttcaaaaaactgtcctaaatgtcagtctgaactaattttt
agtgaatcaggaattgatcaattttgtcaaaacaaaaattgtcctggcataattctccaa
aaaatcgttcacttttcatcaaaagctgctttaaatattgaaactttagccgaaaaaaga
attcaaacactactggataaaaaaattatttctaatatttgtgacatttttgaccttaaa
aataaccttgaaaaaatttattccgaatttaaacctagtcaattaaattcagaaaataaa
cgcgctccatctttgcaaattaagtcagtaattaaattgcttaatgaagttgaaaaagca
aaaaacatcgattttcataggttaatttttggtttaggaataaaaaacgttggaataaaa
gctgctaaaattcttgcaagatatgctaaaaatatctctgaattaagaaaattagatttt
gaaatactaaaaaatcaaaatgattttggccctgttataattagttcgctgactgattat
tttaataatgaggaaaatcaaaaactacttgactgtcttgaaaatgtgaattttaatttt
aaaaatccaactatttcaccgtcttcaattggttgaacatcgtttgcaatctcgggaaaa
ttatcaaaaccaagacacgaatttgttaaaattatagaacaaacaggcgcatattttcat
acatcaataacaaaacaaaccgcttatttagtggcaggggaatcgactggatcaaaaata
gaaaaagcaattaaattaggtgttaaaagaatctctgaagaagaattttgagatctaata
aaaagtaaaattgaataa
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