Malania oleifera: 131154107
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Entry
131154107 CDS
T09312
Name
(RefSeq) 5'-3' exoribonuclease 4
KO
K20553
5'-3' exoribonuclease 4 [EC:3.1.13.-]
Organism
mof
Malania oleifera
Pathway
mof04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
mof00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
131154107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mof03019
]
131154107
Messenger RNA biogenesis [BR:
mof03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
131154107
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XRN_M
XRN_N
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
131154107
NCBI-ProteinID:
XP_057962612
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All DBs
Position
4:complement(106445828..106533816)
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AA seq
953 aa
AA seq
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MGVPAFYRWLADRYPRCITDVVEEEPAEGENGVLLPIDVAKRNPNGMEFDNLYLDMNGII
HPCFHPEGKPAPATYDDVFKSIFDYIDHLFSLIRPRKLLYMAIDGVAPRAKMNQQRSRRF
RAAKDAAEAEAEEERLREEFEEESKGLSSKEKPETCDSNVITPGTQFMAVLSVALQYYIH
ARLNRNPGWWYTKVILSDSNVPGEGEHKIMSYIRLQRNLPAFDPNTRHCLYGLDADLIML
SLATHEIHFSILREVITLPGQQGKCFLCGQVGHLAAECPGSQAEDLNEKAVDNTPIHKKK
YQFLNIWVLREYLQYDLDIPNAPFKINFERIVDDFVFLCFFVGNDFLPHMPTLEIREGAI
NLLMNVYRRDFAAIGGYLTDAGEVLLERVEHFVQSVAVYEDQIFQKRTRIKQAIENNEET
RLRMARENSEEPKAPVVDKVRLGDPGYKERYYEEKLGLSSPEVIDKARRDMVFKYVEGLC
WVMKYYYQGVCSWLWFYPYHYAPFASDLKDLGDLEITFFLGEPFKPFDQLMGTLPAASAH
ALPEKYRELMTDPSSPILHFYPSDFEIDMNGKRFAWQGVAKLPFIDEKKLLAETKKLEST
LKEEEMVRNRVMLDLLYVFSYHPLAAQIFSYYQFYYQLSPDKRYAWSIDTNVSGGMNGFL
WLCERNEWRETVPSPLSGLPDIESNKVLNVTYVNPPHHKHIPEPPEGVTMPGKVLQLSDI
KPFPMLWHEDNGRRQLGRERAQVPGAISGPLLGEAAHRLLKNTLNIKNSFSPALHAQLPY
QTAPVNHTVHRPRPAGPSGYERGFNENGHYSNRRGIMSCPRFPPSPSEIQGNRQNIRSQY
RSSYQEQNHNYEEQYHNARVGMSALTIDSARTRPHTTASPRMPSSGSLPNLRPQLVQNTS
PLPSPPPKWINRSTGSAGMYFRPETASNEKQVKKVYQIKTRVSQSPPDSELQQ
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgccggcgttctacaggtggcttgcagatcgctaccctcggtgcatcaccgac
gtggtggaggaggagccagcggagggcgagaatggagttctcctgcctatcgatgtcgct
aagcggaaccctaatggcatggagttcgataatctctatttggacatgaatggcatcatt
catccctgctttcaccccgaaggcaagcctgcgccagccacatatgatgatgtatttaaa
tcgatatttgattacatcgaccatctcttttcattgattcgcccaagaaagcttctttat
atggcaattgatggagtcgcaccaagagctaagatgaatcagcaacgttctcggcgattt
agagctgccaaagatgctgctgaggctgaagctgaagaggaaagattgagggaagagttt
gaggaagagagtaaaggtttgtcttctaaagaaaagcctgaaacatgtgattcaaacgtg
atcacacctggaactcaatttatggctgtgctgtcagtggcgctgcaatattatatacat
gccaggttaaaccgcaatcctggctggtggtatacaaaggttattctttccgattcaaat
gttcctggtgagggagaacataaaataatgtcatacattcggttacagcgtaatcttcct
gctttcgatccgaacacccgacactgtctttatggtctagatgcagatttgattatgctg
tctttagcaacgcatgaaattcacttctcaatattaagagaggttatcactctgcctggg
cagcaggggaaatgtttcctctgtggtcaggttggtcatctggctgctgaatgtcctggg
agccaagctgaagatttgaatgagaaggctgtggacaacactcccattcacaagaagaaa
tatcagttcctgaacatctgggtgttgcgagaatatttgcagtatgatttggatattccc
aacgctccattcaagattaactttgagcggatcgtggatgattttgtgtttctatgcttt
tttgttggcaatgactttcttccacatatgccaacattggaaatccgggagggtgctata
aatctattgatgaatgtgtatagaagggactttgcagctataggtggttatctaactgat
gctggtgaggtcttgctggaaagagtagaacattttgttcagtcagttgctgtctatgaa
gatcaaatttttcagaagcggactcgtataaagcaggctattgagaataatgaagagacg
aggcttagaatggcgagagagaactctgaagagccaaaggctccagttgtggacaaggtg
aggttaggggacccaggatataaggaaagatattatgaagagaagttaggtttatcaagt
ccagaggtgattgataaagccagaagagacatggttttcaagtacgtggaaggcttgtgt
tgggttatgaagtattactatcagggtgtttgctcctggctatggttttatccatatcat
tatgctccttttgcttctgatcttaaagatcttggagatcttgagattacatttttcttg
ggtgagccatttaaaccttttgaccagctcatggggaccctaccagctgcaagtgcacat
gccctgcctgaaaaatacagagaattgatgactgacccatcatcgcctatccttcacttc
tacccttctgactttgagattgacatgaatgggaagcgctttgcgtggcagggtgttgca
aaattgccattcattgatgagaagaaattgcttgctgaaactaagaagcttgaaagcact
ttaaaggaagaagaaatggttcggaaccgtgtgatgcttgatttgttgtatgttttttct
tatcatccgttggctgcacaaatattctcatactaccagttctattatcagttaagccca
gataaaagatatgcttggtcaattgacacaaatgtgagtggtggaatgaatggattcctt
tggttatgtgagaggaatgagtggagggaaacagttccttctcctctcagtggattgcct
gacattgagtctaacaaagtcttaaatgttacctacgttaatcctccacatcataagcat
attccagaacctcctgagggggtaaccatgcctgggaaggtcttgcaactttctgacata
aaaccattccccatgttgtggcatgaagacaatggacggcgccagctaggcagagagagg
gcacaagtacctggggcaatctctggtcctctattgggagaagcagctcaccgtctcctc
aagaatacacttaatataaaaaattccttctcccctgcactgcatgctcaactaccgtat
caaactgccccagtcaatcatacggttcatagaccaagaccagctggaccctctggatac
gaaaggggctttaatgagaatggacattacagtaatcgtcgaggcataatgagttgccct
agatttccaccatctccaagtgaaattcagggcaaccgacaaaatatcaggtcacaatac
agatcttcatatcaagaacaaaaccacaattatgaagaacaataccacaatgcaagggtt
gggatgtctgctttgacaatagatagtgctagaacccgaccacatacaacagcatctccc
aggatgccaagttcaggttcactgccaaatctccgtccacagttagtgcagaatacgagt
ccacttccttccccacctcccaagtggattaatagatcgactggaagtgctggaatgtat
tttagaccagaaactgcttccaacgaaaagcaggtgaaaaaagtctatcagatcaagact
cgggtatcccagagtcctccagactctgaacttcagcagtga
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