Microbacterium oleivorans: BWL13_01500
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Entry
BWL13_01500 CDS
T05832
Symbol
ligA
Name
(GenBank) DNA ligase A
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
moo
Microbacterium oleivorans
Pathway
moo03030
DNA replication
moo03410
Base excision repair
moo03420
Nucleotide excision repair
moo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
moo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BWL13_01500 (ligA)
03410 Base excision repair
BWL13_01500 (ligA)
03420 Nucleotide excision repair
BWL13_01500 (ligA)
03430 Mismatch repair
BWL13_01500 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
moo03032
]
BWL13_01500 (ligA)
03400 DNA repair and recombination proteins [BR:
moo03400
]
BWL13_01500 (ligA)
Enzymes [BR:
moo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BWL13_01500 (ligA)
DNA replication proteins [BR:
moo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BWL13_01500 (ligA)
DNA repair and recombination proteins [BR:
moo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BWL13_01500 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BWL13_01500 (ligA)
MMR (mismatch excision repair)
DNA ligase
BWL13_01500 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BWL13_01500 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
HHH
Nlig-Ia
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
AZS43924
LinkDB
All DBs
Position
complement(1519261..1521585)
Genome browser
AA seq
774 aa
AA seq
DB search
MADAELPALTLDEARAEAERLTERILGAREAYYGGDVGLVDDVTYDAWMHELEAIERAHP
ELQGQDSPTQTVGAAESSMFAPVEHAERMLSLDNVFSPEELREWCTKAEASAGRPVEWLT
ELKIDGLAISLRYENGVLTSAATRGDGRIGEDVTVNAVRVAGIPERLSGTGHPRIVEVRG
EVFIPVAAFEELNALQARLRERVIADAAARPRYDEEKAQKSAARRFPAFANPRNAASGGL
RQQLDKKSGLELEAGEARLASLRMYVHGIGAWPDPPVAAQSEVYGLLAEWGLPVSPYPRT
FDDVDGVLAFVAEYGEKRHSVAHELDGIVVKVDELSLHDELGMTSRAPRWAIAYKYPPEE
VQTRLVDIIVSVGRTGRATPYAQMAPALVAGSVVRQATLHNQDVVKAKGVLIGDMIVLRK
AGDVIPEVLGPVAELRDGSERAFVMPTQCPECGSTLAPAKEGDIDLRCPNTRGCPAQVRG
RVEHIGSRGALDIEALGEVTAAALTQPLAPQEPALETEAGLFDLTLDQLVPIEVIVRDSE
TGEARRDDVTGDVIRRAPFRRNPSVAEKKEGLTGPQPSAQALTLIDELEKAKTKDLWRFL
VALNIRHVGPVAARALAQYFGSLDAIRAATRDELAAVDGVGGIIADALQDWFALDWHVDI
VQRWVAAGARLAIPGHPGPGAAAAAGGVLEGMTVVATGSLEGYTREGAQEAIMQAGGKAA
SSVSKKTDFVAAGPGAGSKLAKAEALGVRIIDAAQFHLLVTEGPGALGNPPAAE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacgcagaactccccgcactgaccctcgacgaggcgcgagccgaggccgagcgc
ctcaccgagaggattctcggtgctcgagaggcgtactacggcggcgacgtcggcctcgtc
gacgacgtcacgtacgacgcgtggatgcatgagctcgaggcgatcgaacgcgcacacccc
gagttgcagggccaggactcaccgactcagacggtcggcgccgcagaatcgtcgatgttc
gctccggtcgagcacgccgagcggatgttgagcctcgacaatgtgttctccccggaggag
ctccgcgagtggtgcaccaaggccgaggcgtcggccggtcggcccgtggagtggctcacg
gagctcaagatcgacggtctcgcgatctccctccgttacgagaacggcgtcctgacctcc
gcagccactcgcggcgacggccgcatcggcgaggacgtgacggtcaacgccgttcgcgtg
gcgggcatcccggagcgactgtcgggcacggggcatccgcggatcgtcgaggtgcgcggc
gaggtcttcatccccgtcgcggccttcgaagaactcaacgcgctgcaggcgcgccttcgc
gagcgcgtcatcgcggatgccgccgcacgccctcgctacgacgaggagaaggcgcagaag
agcgcggcccgacgtttcccggcgttcgcgaacccccgcaacgccgccagcggaggcctg
cgccagcagctcgacaagaagtcgggactcgaactcgaagccggcgaagcgcgactcgcg
tcgctccgaatgtacgttcacggcatcggcgcctggcccgacccgcctgtcgccgcgcaa
agcgaggtctacggcttgcttgccgaatgggggctgcccgtcagcccgtacccacggacg
ttcgatgacgtcgacggggtcctcgctttcgtcgccgagtacggcgagaagcgccactcg
gtcgcgcacgagctcgacgggatcgtcgtgaaggtcgacgaactctcgttgcatgacgag
ctggggatgacgagtcgtgcgccgcggtgggcgatcgcctacaagtacccgcccgaggaa
gtccagacgcgcctggtggacatcatcgtctccgtgggtcgcaccgggcgtgcgactccg
tacgcgcagatggcccccgcgctcgtggcgggcagcgtcgtgcggcaggccacgctccac
aaccaggacgtcgtgaaggccaagggcgtcttgatcggcgacatgatcgtcctgcgcaaa
gccggtgacgtgatccccgaggtgctcggtcccgtggcggaactccgcgacggcagcgag
cgcgcgttcgtcatgccgacgcagtgtcccgagtgcggatcgaccctggctcccgccaaa
gagggagacatcgatctccgctgccccaacacgcgcgggtgtcccgcgcaggtccgcggg
cgcgtcgaacacatcggttcacgaggtgcgctcgacatcgaagccctcggcgaggtgacg
gcggccgccctgacacagccgctcgcgccccaagagccggccctcgagacggaggccggt
ctgttcgacctgaccctcgatcagctcgtccccatcgaagtgatcgtgcgggattccgag
accggcgaggcccgcagagacgacgttaccggtgacgtgatccggcgggcgcccttccgg
cgtaacccgagcgtggcggagaagaaggagggcctgaccggtccgcagccgtcggcacag
gcgttgacgctcatcgacgaactcgagaaggccaagacgaaagacctgtggcggttcctc
gtcgcgctgaacatccgccacgtcggccccgtcgccgcgcgtgcgctggcccagtacttc
ggctcactcgacgcgatccgcgcggcgacgcgggacgagcttgccgccgtcgacggcgtc
ggcgggatcatcgcggacgccctgcaggactggttcgcgctcgactggcacgtcgacatc
gtgcagcggtgggtcgctgccggtgcgcggctcgcgatccccgggcatcccggtcccggt
gctgcagctgcggccggcggcgtgctcgagggcatgaccgtcgtcgcaacgggatcgctc
gaggggtacacccgagagggcgcgcaggaggcgatcatgcaggccggggggaaagcggcc
tcgagcgtctcgaagaagaccgatttcgtcgccgccggccccggcgccggatcgaagctc
gcgaaggcggaggcgctcggtgtgcgcatcatcgatgcggcgcagttccacctgcttgtc
acggagggacctggcgctctcggcaacccgcccgccgcagagtag
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