Marasmius oreades (fairy-ring mushroom): E1B28_001671
Help
Entry
E1B28_001671 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
E1B28_001671
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
more03041
]
E1B28_001671
Spliceosome [BR:
more03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
E1B28_001671
Complex C
U5 SnRNP specific factors
E1B28_001671
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
MMR_HSR1
EFG_III
EFL1
Dynamin_N
SRPRB
EF-G_D2
Ras
Motif
Other DBs
NCBI-GeneID:
66070747
NCBI-ProteinID:
XP_043016337
UniProt:
A0A9P8AFN0
LinkDB
All DBs
Position
1:4606843..4610666
Genome browser
AA seq
986 aa
AA seq
DB search
MASLDDYDEFGNYIGADLDSDDEEVPTNTFIPQQPTGGAPAPLEGFEDEPMQEEVPEGAL
MEIDSEPVNRAVILHEDKQYYPSAQDVYGADVETLVQEEDAQPLSEPIIAPIKVRKWTVE
EKDMPETRFDKGFLLDMAAFPEMIRNVAVVGHLHHGKTALMDMLVFETHKLIWDSDKPTR
YTDTHVLSRERQISIKSSPMSLILSTTKGKSHLIHLIDTPGHINFVDEVASAIRLVDGIV
LVVDVIEGMMVGTEHIIRHALQENVKITLVVNKIDRLILELRIKPADAYYKIKHTIEEIN
TFISGIDPDPGLRLSPENGNVAFASTDMNWCFTLTSFAQMYADSFRTKVDVPSFAARLWG
DVYFDDSTRKFTRKPADAEHNRSFVHFILEPLYKLYSQVLSEETETLRETLEGLGIKLKP
VMYKMDVRPLLKAVLDQFFGPATGLIDVIVDHIPSPVDNAVNKIQGTYSGPQTSELAAAM
QMCDASGPVMVQVAKLYHTTDAQSFRAFGRVYSGVLKKGMEIKVLGEGYSPEDEEDMMKV
IVEDLWMSEARYFIPADEIPAGNLVLIGGIDASISKTATLASVDIQEDLHIFRPIKHMTQ
SVLKIAIEPIAPSELPKMLAGLRSINKSYPLVATKVEESGEHVLVGTGELYLDCVMHDLR
RLFSEIEIKVSDPVTKFCETVLETSALKCYADTPNKKNKITMIAEPLERGIAEDIERGRV
NMKMSAKDRGKFFKEKYEWDLLASRSIWAFGPDENGPNVLLDDTLPSQIDKKVLGTVKEH
IKQGFQWGAREGPLCDEPMRNVKFRLLDASLADQPIFRGGGQVVPTARRVCYSSFLMATP
RLMEPIYYVEVQAPADCISAVYTVLARRRGHVTQDIPKAGSPLYTVKALIPVIDANGFET
DLRTATQGQAFCLQVFDHWSIVPGDPTDTSIKLRPLEPASGQALARDLVLKTRRRKGLGD
QIAVSKYLDDEFVLALSASGHADLLS
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcttccctcgacgactacgacgaattcggtaattacattggtgctgaccttgattcc
gacgatgaagaagtccctaccaacacgttcataccccagcagcctactggcggtgcacca
gcacctttagagggttttgaggatgagccgatgcaagaagaagtaccagagggtgctctt
atggaaattgatagtgaacctgtcaatcgtgcggtcattttgcatgaagacaaacagtat
tacccctcggctcaagacgtgtacggcgcggacgttgagacgctggtacaggaagaagat
gcgcaaccactctctgagcccataatcgcgcccattaaagtacgaaaatggactgtcgag
gagaaggatatgcctgagacacggttcgataaagggttcctgcttgacatggcagcgttc
cccgagatgattcgtaacgttgctgtcgtcggacatctacatcacggcaagactgctttg
atggacatgctggtttttgagacacataagctcatatgggactcggacaaaccgacgaga
tacacagacacgcacgttttatctcgagaacgacagatttccatcaaatcttcgcccatg
tccctcatattatcgacaaccaagggaaagtcgcaccttatacaccttattgatacaccc
ggtcatatcaactttgtggatgaagttgcctctgccatacggctggtagatggtattgtc
ttggttgtggatgtcatcgaagggatgatggttggaactgaacacatcatcagacacgct
ctccaggaaaacgtgaaaatcactctcgttgtgaacaaaattgaccgcctcattttggaa
ttgagaataaaacctgcagacgcttattacaaaatcaagcacacgatagaagaaattaac
actttcatcagtggcattgacccagatcctggacttcgtctcagtcccgaaaacggaaac
gttgcatttgccagcacagacatgaactggtgcttcaccctcacctctttcgcccagatg
tatgccgactcctttagaacgaaagttgatgtgccttcgtttgcagcgcgtctctggggt
gatgtctatttcgacgattccacgcgcaagtttacccgaaaacctgccgacgcagaacac
aatcgctctttcgtgcacttcatccttgaacccctttacaagttgtactcacaagtgctc
tcagaggaaactgaaactttgagggagacccttgaaggtttgggcatcaagctcaagcca
gtcatgtataaaatggacgttagacctcttttgaaagctgtgttggaccagttctttggg
ccagctactgggttgatagacgtaatagtcgaccacatacccagccccgtggataatgct
gtcaacaagatacaaggaacatatagcgggccacaaacctccgaattagctgctgcgatg
cagatgtgtgatgcttcgggacctgtgatggtacaagtggcaaagctgtaccatacgacc
gacgctcagtctttcagagcttttggaagagtttacagtggcgtcctgaagaagggaatg
gagatcaaggtcctcggtgagggctattctcctgaagatgaggaggacatgatgaaagtc
attgtagaagatctttggatgagtgaagctcgctattttattcctgccgatgaaatccct
gccggcaatcttgtcttgattggtggcattgatgcctccatatcaaaaactgcgacgtta
gcatccgtcgatattcaggaagaccttcacatcttccgtcccataaaacacatgacgcag
tcggttctaaagattgcaatcgagcccatcgcgccttcagagttgcccaaaatgcttgcc
ggattgcgttcgataaataagtcgtaccctttggttgcaacgaaggtagaggagagtgga
gagcatgtcctcgtgggtacaggcgaactctatctggattgtgtcatgcatgacttgaga
aggttgttttcggagattgagatcaaggtttcagatccggtcacaaagttctgcgaaacg
gtgttggagaccagcgctcttaaatgctatgcagacacgccgaacaaaaagaacaaaata
acgatgattgccgaacctctagaacgcggtatagcagaagatatcgagcgtggcagagtg
aacatgaagatgtctgcaaaggatagaggaaagttcttcaaagaaaaatacgagtgggat
ctcctggcatctcgatcaatatgggctttcggacccgatgaaaatggtccaaatgtcctt
ctcgatgatactctaccgtcccagattgacaagaaggtgctgggtacagtaaaggaacac
ataaagcaaggtttccagtggggtgctcgagaaggtccattgtgcgacgaacctatgcga
aatgtcaaattccgcctgctcgacgccagtctcgctgaccaacctatcttccgaggcgga
gggcaggtcgtccctacggctcgtcgcgtctgttattcatctttcctgatggccacccct
cggctgatggagccgatttactacgtggaagtacaggctccagcggattgtatatcggcc
gtttatactgtcctcgctcgccggcgtgggcatgtcacacaagatattccaaaagccggt
tcgccgctctacaccgtcaaagcgctcattccggttattgatgccaatgggttcgaaacg
gatttgagaacggcaacccaaggacaggcattctgtttacaggttttcgaccactggtcg
attgtgccaggtgatcccactgacacaagtatcaagcttcgaccattagaacccgcatca
ggacaggctcttgcacgagatttggtactgaaaactcgccggagaaaaggcttgggtgac
cagatcgcagtgtccaaatatctggacgacgagtttgtgcttgcattgtcggcctctgga
catgcagatttattgagttaa
DBGET
integrated database retrieval system