Marasmius oreades (fairy-ring mushroom): E1B28_008008
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Entry
E1B28_008008 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B28_008008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_008008
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
E1B28_008008
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
AAA_25
AAA_23
AAA_15
RsgA_GTPase
AAA_28
Zeta_toxin
SRP54
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
66077084
NCBI-ProteinID:
XP_043010878
UniProt:
A0A9P7S4M7
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Position
4:3875589..3879249
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AA seq
294 aa
AA seq
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MQADQPAVEINSLTFKHNTLFTAPPEDYYEFPGLRDVNFSLPRGSVTLLIGGNGAGKSTL
LYILAGKRMIQEGEVKAFGRDVFRSFADNVVYLGTEWAMRAGVRGDIVVSDFLDSVGGYR
FKERRDRLLDILDINLDWHMHAISDGERRRVQLCMGLMGNWDILLLDEVTVDLDVLTRFS
LLKFLKQEANERKATIIYATHIFEGIDDFPTHIAHMRDGTFVTNPTSWPIPNSNSKSLHA
IALEWIGNDRKTRDREEKEGKRKKVRGARFQITPTDSETFYRKYDYGRQTNHYT
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgaccagccggccgtcgaaatcaatagcctcaccttcaaacacaacacccta
ttcaccgctccacccgaggactactacgaatttccaggactgcgagatgtcaatttctcg
ctaccacgaggttcagtaacgttattgatcggcggaaatggagctgggaagagcaccctg
ttgtatatccttgctgggaagagaatgatccaggaaggagaggttaaggcgtttggaagg
gatgtttttaggagttttgcagataatgttgtatatctcggcactgaatgggcaatgaga
gctggtgttcgaggcgacattgtagtttcggatttcctggatagcgttggaggttataga
ttcaaggaacgtagagatcgtttacttgatattcttgacattaacctggactggcacatg
cacgcgatctctgacggagagagacggagagttcaactctgcatgggcttgatgggcaat
tgggacattcttctactcgacgaggtcactgttgatctcgacgtgctcaccagattctcg
ctacttaaattcttgaaacaagaggcaaatgaacgtaaagccaccatcatctatgccaca
cacatcttcgaaggaattgacgactttccgacccacatagctcacatgcgggatggcact
tttgtcaccaatccaacgtcttggccaatccctaatagcaactcgaagagtttgcatgcc
attgcgctcgagtggattggcaatgacagaaagacgcgtgatcgtgaagaaaaggaaggg
aagcggaagaaggttcggggtgccaggtttcagattacccccacggactcggaaacgttt
tacagaaagtacgactacggccgccagacgaaccactatacgtga
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