Marasmius oreades (fairy-ring mushroom): E1B28_008616
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Entry
E1B28_008616 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
E1B28_008616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_008616
03032 DNA replication proteins [BR:
more03032
]
E1B28_008616
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
E1B28_008616
mRNA cycle factors
Common to processing body (P body) and stress granule
E1B28_008616
DNA replication proteins [BR:
more03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
E1B28_008616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_4
EST1_DNA_bind
HARP
Motif
Other DBs
NCBI-GeneID:
66077692
NCBI-ProteinID:
XP_043008721
UniProt:
A0A9P7UTG5
LinkDB
All DBs
Position
5:1780469..1784770
Genome browser
AA seq
1144 aa
AA seq
DB search
MPKGAPQPTDIDEKLIALRRRTAVQTRPKEKSERPSGEKPSRPPSVPTQQQRLSPKRPHQ
VIIQRPSDADAEDFSRLNISSHSSSRPVQSSTQSNPHSKLYNPDRDPIPTMRRTAEPESM
SQTASNGRPTRDTEGSMKQLFDHRKDNPVRFSVLARPQQHGQRPVPTPKSSGEYISASST
SSYAASQVSSTFTLSSTTDGSSVPSALFDRQDKPHEESSGTNAFAQQLKRLYRTITILET
KVQKEDVDVEKDSRDNNRILLKGKNVQLEEDEEEKEREKWTRQIEDHKRLIETIHSLLEI
SLAPSVPASLRIIPKKYNIIVRLWTFGFHKLLENLRRASLTSPLALEHLQDFIYFAYTFY
TGLLDEPPLAQFRHGWLEALGDLARYRMMVAGMITAGNLSSAALKTSETAVNAVKKELAD
GQLVIPTDTGAKSVSNAPAARIDDSPSPSVGIAAARALEIEPEVERWRSLARDWYGKVLA
EQPGAGRLHQHLGMLSRELPGEEIRAIYHFVKSMTTLRPFPLSRESILSIWSPEAQARRQ
LSDARLPDLFVLLHGMLFTNIQLDDFRSTLFRFVERLELEGAEERVWTMMAVINISSILE
YNKPNGILKRCGGITSRESATVPVRVMTKKEAGKDDDKMDVDEDKPSDISPPPSDAETEN
MEQSMAYKLALELTFSVLSHVLRRPHRRASLYAKKRLNPYLTVILTFLATVLKHEKTLEV
MEKSIPWEELTSFFATIPRSTMHSQGLMDPVVSRPDGGDRWMMLTSSCAPPLPEDWCLRG
MEWVGRKVYERGYWKSGEDRQVEIEVLDDEEAEPTDDGRIEDGSEDENNSVTKKRYIRIA
RCAVTLADVVKGFTWVEGSREWRVEGELSDKIQQWKEEEQQEKEEEERRKVGNCWVDDSM
DIDEDSSEGYLESSSDDDDELDTPEIRELKARRRHLQMLLRSSQMESSRSRVKRASRKEG
KSHPVLPIQPGYTVLVVDTNILLSSLSTFVSLVESLRWTVLVPLPVVMELDGLKSNALPQ
LSQAADDALKYITSHIRSYSSSLKVQTSKGNYLTSLNVRTEEVDFASGKSERSMDDLILK
TAIWHDKHWIDRSAMLKSDGIQTVANPIKVVLLSLDRNLRLKARSRQLPAAGETDLAMLL
SDGT
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagggcgcaccccagcccacagatattgacgagaaacttatcgctcttcggcgg
cgaacagcagtacaaacgaggcccaaggaaaaatcagagaggccatcaggtgaaaaacct
tctcgtcctccatcagttccgacccagcaacaacgtttgtctccgaaaagacctcatcaa
gtaatcatacaacggccatccgatgcagatgctgaggatttttctcgactcaatatttca
tcacattcttcttcacgacccgtgcaatcatctacccagtcgaatccacactcaaagctc
tataacccagatcgtgatcctattcctaccatgcgccgtaccgcagagcctgaatcaatg
tcgcagaccgccagcaatggccgaccaactagggatactgaagggtcaatgaagcaactt
ttcgatcataggaaggacaatccggtgcgattttctgttcttgctcgaccgcaacagcat
ggtcagcgacctgtgcctacaccgaaatcctccggcgaatatatttcagcctcttcgact
tcatcgtacgctgcctcacaagtttcttccaccttcaccctctcatctacgaccgatggc
tcttctgtcccctccgcactcttcgatcggcaagacaagccccatgaggaaagctcgggg
actaatgccttcgctcagcaactcaagagattgtatcgcacgatcacaatccttgaaacc
aaagttcaaaaagaggatgttgatgtagagaaagatagccgggacaacaatcggatcttg
ctcaagggtaagaatgtacagcttgaggaagatgaggaagagaaggaaagggaaaagtgg
acacggcagattgaagatcataaacgactcattgaaacgatccactctctgctcgaaata
tctcttgcaccctctgttcctgcttcccttcgaatcattcccaagaagtataacatcata
gttcggttgtggacgtttgggttccataagctcctcgagaaccttcggcgggcatccctc
acatcacctctcgctttggaacatttacaagatttcatctacttcgcgtacacattttac
actggactactcgatgaaccaccgttagcccagttcaggcatggctggctggaagcatta
ggtgacctcgcgcgatacaggatgatggttgcgggcatgatcactgcgggaaacctaagt
tccgcagctttgaagacttcagaaaccgcagttaacgcagtaaagaaagaactagccgat
ggccagctcgtaatccccactgacactggagcaaagtccgtgagcaacgcacccgcagct
cgcatcgacgactctccttcaccgagcgtcggaattgctgcagcacgtgcacttgaaatt
gagccagaggtcgaaagatggcgctctcttgctcgagattggtacggtaaagtattggcc
gagcagcctggagccggaagactgcaccaacatttgggcatgttaagtcgtgagcttcct
ggagaagaaataagagcgatttatcattttgtgaaaagtatgacaacacttcgtcctttt
cctttatctcgtgaatcaatcctctcgatatggtcccctgaagctcaggccaggcgccag
ttatccgacgcccgtcttccagatctctttgtgctcctacatggaatgcttttcaccaac
atccagctggatgattttcgttcgactctcttccgtttcgtcgagcgacttgagcttgaa
ggtgccgaagaacgcgtatggaccatgatggccgttatcaacatcagttccatcctagag
tacaataagcccaatggcattctcaagagatgtggtgggataacttcaagggaatctgct
actgtccccgtgcgagtcatgacgaagaaggaggccggaaaagatgatgataagatggat
gtagacgaagacaaaccatccgatatctcccctcctccttcagatgctgaaacagaaaac
atggagcaatcgatggcatacaagctcgcattggaactaactttctcggtcctttcacac
gttcttcgacgaccgcatcggagggcctccctttacgccaagaaacggctaaacccgtat
cttactgttatcttgacatttctagcgacggtccttaagcacgaaaaaactctcgaagtc
atggagaagagtataccctgggaagagttaacaagtttcttcgccaccattccaagatct
accatgcactctcaaggtctgatggaccctgtagtttctcgtcccgatggaggtgatcga
tggatgatgctgacttcctcgtgtgcgcctccactgccggaagattggtgtttaagaggt
atggaatgggtcggaagaaaggtatacgagcgtggctattggaagagcggcgaggataga
caggttgaaattgaggtgcttgatgacgaagaagcggaaccgacggatgatgggcggatt
gaggatggttctgaggacgagaataactcggtcaccaagaaacgttatatacggattgct
cgatgcgctgtcactctggctgacgttgttaaaggatttacttgggtagaaggctctagg
gaatggagagttgaaggagagctctctgacaaaattcaacagtggaaggaagaagaacag
caagagaaggaggaggaagaaaggagaaaagtcggtaactgttgggtcgatgattctatg
gatatcgatgaagatagttctgaaggatatttggagagcagtagtgacgacgacgacgag
ttagatactccggaaatccgagagctcaaggctcgtcgaaggcacttgcagatgttgctc
cggtcttcacaaatggaatccagtcgctctcgtgtcaagcgtgcatccaggaaagaaggg
aagagtcacccggtattgcccatccaaccgggatacactgtactcgttgtggacaccaac
attcttctatcctctctatctacttttgtgtccttggtggagagtctccgctggaccgtc
ctcgttcctctgcctgtggtgatggagctggacgggctgaaatccaatgcattacctcag
ttgagccaagctgctgatgatgccctcaagtacatcacttcccatattcgctcctatagt
agttcgctcaaggttcagacttcaaaagggaactatctcacatctctcaacgtccgaaca
gaggaggttgattttgcgagtggaaaatctgagagaagtatggatgatctcatcctcaaa
acagctatctggcacgataaacactggatcgaccgatctgcaatgttaaagtcagatggt
attcaaaccgtggccaatccaatcaaagttgttttgctcagtctcgatcgaaatttgcgc
ctcaaagcccgttcgagacagttaccggctgcgggtgagacagatcttgctatgcttctt
tccgatggcacgtaa
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