Marasmius oreades (fairy-ring mushroom): E1B28_012682
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Entry
E1B28_012682 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12608
CCR4-NOT complex subunit CAF16
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B28_012682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_012682
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
E1B28_012682
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Paralog
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GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_29
RsgA_GTPase
AAA_25
Zeta_toxin
AAA_23
ATP-synt_ab
AAA_28
SRP54
AAA_15
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
66081757
NCBI-ProteinID:
XP_043005184
UniProt:
A0A9P7UNY2
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Position
8:2290377..2291870
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AA seq
298 aa
AA seq
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MSMSTPDIAVNIRNLTFHHILPGTRLPVTPEPTLLDVNFNLLKGSRTLLIGGNGAGKSTL
LTLLSGKRMIQKGDMTIFGRDVFRDLPEGVTYLGTEWAMNARVRGDIVVSNFLDSVGGYR
HKERRDHLLNVLDVNLDWHMHAISDGERRRVQLVMGLMGQWDLLLLDEVTVDLDVLVRSE
LLKFLREESESRGATIIYATHIFDGLDDFPTHVAHMRDGAFALNPTPWPLEASLMPPDGQ
LLKTGSLLHSVALTWLAEDRSHRIKEEKEGKRPVLRGARKQVNPTDSESFYKKYDYSH
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgagcactccagacatcgctgtcaatatccgaaacctcactttccaccacatt
cttcccggaacacgtcttccagttaccccggaacctacccttctcgacgtcaacttcaat
ctcctaaaagggtcgcgaacgctcttgattggtgggaatggtgctggaaagagtactttg
ctaacgcttttgtccggaaaacgtatgattcagaaaggagatatgacgatttttggtcga
gatgtttttagagatcttccagagggcgtcacataccttggaaccgaatgggcgatgaat
gctcgtgtcagaggggatatcgtcgtttccaatttcctcgacagtgtagggggatataga
cacaaggagcgaagagatcatttgttgaacgttcttgacgtgaatctagactggcacatg
catgctatatcggacggggaacgaagacgcgttcaactcgtaatgggtctcatgggtcaa
tgggatttacttctactcgacgaggtaacagtcgacctcgacgttctcgttcgcagtgaa
cttttgaaattcctccgagaggagtctgaatctcgcggtgcaacaatcatctatgcgaca
catatctttgacggacttgatgattttcctacccatgtggcgcatatgcgggatggcgca
ttcgcgttgaacccaaccccttggcctctagaagcttccttgatgccaccggacggccaa
cttctcaagacaggatccttacttcattctgttgcgctcacatggctcgcggaggacaga
tcgcatagaatcaaggaagaaaaagagggaaagagacctgtcctcagaggagctaggaaa
caggtcaatcccactgattctgaatcattttacaagaagtatgattacagtcattaa
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